RNA–Protein interactions for RNA: YDR328C

SKP1, Transcript of Evolutionarily conserved kinetochore protein, yeast

Gene SKP1, Length 585 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SKP1	YDR328C	GLK1	P17709	500 aa	Known RBP	6.71	□□□□□ -1.34
SKP1	YDR328C	STE4	P18851	423 aa		6.71	□□□□□ -1.34
SKP1	YDR328C	GPI12	P23797	304 aa		6.71	□□□□□ -1.34
SKP1	YDR328C	ASF2	P32448	525 aa	Predicted RBP	6.71	□□□□□ -1.34
SKP1	YDR328C	WBP1	P33767	430 aa	Known RBP	6.71	□□□□□ -1.34
SKP1	YDR328C	SEA4	P38164	1038 aa		6.71	□□□□□ -1.34
SKP1	YDR328C	IFA38	P38286	347 aa		6.71	□□□□□ -1.34
SKP1	YDR328C	UBS1	P38290	277 aa		6.71	□□□□□ -1.34
SKP1	YDR328C	LEU5	P38702	357 aa		6.71	□□□□□ -1.34
SKP1	YDR328C	YHR097C	P38809	366 aa	Known RBP	6.71	□□□□□ -1.34
SKP1	YDR328C	TDA11	P38854	504 aa		6.71	□□□□□ -1.34
SKP1	YDR328C	ALP1	P38971	573 aa		6.71	□□□□□ -1.34
SKP1	YDR328C	SMK1	P41808	388 aa		6.71	□□□□□ -1.34
SKP1	YDR328C	APS3	P47064	194 aa		6.71	□□□□□ -1.34
SKP1	YDR328C	LCL3	P53153	274 aa		6.71	□□□□□ -1.34
SKP1	YDR328C	YGR067C	P53243	804 aa		6.71	□□□□□ -1.34
SKP1	YDR328C	MEP3	P53390	489 aa		6.71	□□□□□ -1.34
SKP1	YDR328C	INP1	Q03694	420 aa		6.71	□□□□□ -1.34
SKP1	YDR328C	REX3	Q12090	404 aa		6.71	□□□□□ -1.34
SKP1	YDR328C	YOR214C	Q12282	236 aa		6.71	□□□□□ -1.34
SKP1	YDR328C	GLE1	Q12315	538 aa		6.71	□□□□□ -1.34
SKP1	YDR328C	DBP10	Q12389	995 aa	Known RBP	6.71	□□□□□ -1.34
SKP1	YDR328C	RIP1	P08067	215 aa		6.7	□□□□□ -1.34
SKP1	YDR328C	TFS1	P14306	219 aa		6.7	□□□□□ -1.34
SKP1	YDR328C	CDC26	P14724	124 aa		6.7	□□□□□ -1.34
SKP1	YDR328C	SAC7	P17121	654 aa		6.7	□□□□□ -1.34
SKP1	YDR328C	PRP21	P32524	280 aa	Predicted RBP	6.7	□□□□□ -1.34
SKP1	YDR328C	LST4	P34239	828 aa		6.7	□□□□□ -1.34
SKP1	YDR328C	LHS1	P36016	881 aa		6.7	□□□□□ -1.34
SKP1	YDR328C	SRO77	P38163	1010 aa		6.7	□□□□□ -1.34
SKP1	YDR328C	CTF8	P38877	133 aa		6.7	□□□□□ -1.34
SKP1	YDR328C	EGD2	P38879	174 aa	Known RBP	6.7	□□□□□ -1.34
SKP1	YDR328C	ISC1	P40015	477 aa	Known RBP	6.7	□□□□□ -1.34
SKP1	YDR328C	MSS2	P40990	351 aa		6.7	□□□□□ -1.34
SKP1	YDR328C	HMS2	P47175	358 aa		6.7	□□□□□ -1.34
SKP1	YDR328C	MON1	P53129	644 aa		6.7	□□□□□ -1.34
SKP1	YDR328C	SLD3	P53135	668 aa		6.7	□□□□□ -1.34
SKP1	YDR328C	YGR168C	P53293	376 aa		6.7	□□□□□ -1.34
SKP1	YDR328C	SNF12	P53628	566 aa		6.7	□□□□□ -1.34
SKP1	YDR328C	YSA1	Q01976	231 aa		6.7	□□□□□ -1.34
SKP1	YDR328C	YPL068C	Q02749	293 aa		6.7	□□□□□ -1.34
SKP1	YDR328C	SPO19	Q03029	223 aa		6.7	□□□□□ -1.34
SKP1	YDR328C	RSN1	Q03516	953 aa		6.7	□□□□□ -1.34
SKP1	YDR328C	YPR015C	Q12531	247 aa		6.7	□□□□□ -1.34
SKP1	YDR328C	RPL17A	P05740	184 aa	Known RBP	6.69	□□□□□ -1.34
SKP1	YDR328C	MRPS28	P21771	286 aa		6.69	□□□□□ -1.34
SKP1	YDR328C	ITR2	P30606	609 aa		6.69	□□□□□ -1.34
SKP1	YDR328C	HIR2	P32480	875 aa		6.69	□□□□□ -1.34
SKP1	YDR328C	PRP19	P32523	503 aa	Known RBP	6.69	□□□□□ -1.34
SKP1	YDR328C	ALG3	P38179	458 aa		6.69	□□□□□ -1.34
SKP1	YDR328C	ECM34	P38728	170 aa		6.69	□□□□□ -1.34
SKP1	YDR328C	GOS1	P38736	223 aa		6.69	□□□□□ -1.34
SKP1	YDR328C	SOP4	P39543	234 aa	Predicted RBP	6.69	□□□□□ -1.34
SKP1	YDR328C	MBP1	P39678	833 aa		6.69	□□□□□ -1.34
SKP1	YDR328C	AST2	P39945	430 aa	Known RBP	6.69	□□□□□ -1.34
SKP1	YDR328C	YNL195C	P40168	261 aa		6.69	□□□□□ -1.34
SKP1	YDR328C	RPL17B	P46990	184 aa	Known RBP	6.69	□□□□□ -1.34
SKP1	YDR328C	MPA43	P53583	542 aa	Predicted RBP	6.69	□□□□□ -1.34
SKP1	YDR328C	DBP6	P53734	629 aa	Known RBP	6.69	□□□□□ -1.34
SKP1	YDR328C	NCE101	Q02820	53 aa		6.69	□□□□□ -1.34
SKP1	YDR328C	TLG1	Q03322	224 aa		6.69	□□□□□ -1.34
SKP1	YDR328C	URC2	Q04411	772 aa		6.69	□□□□□ -1.34
SKP1	YDR328C	VID22	Q05934	901 aa		6.69	□□□□□ -1.34
SKP1	YDR328C	ARV1	Q06541	321 aa		6.69	□□□□□ -1.34
SKP1	YDR328C	CRT10	Q08226	957 aa		6.69	□□□□□ -1.34
SKP1	YDR328C	PSF1	Q12488	208 aa		6.69	□□□□□ -1.34
SKP1	YDR328C	NKP1	Q12493	238 aa		6.69	□□□□□ -1.34
SKP1	YDR328C	PAR32	Q12515	295 aa	Known RBP	6.69	□□□□□ -1.34
SKP1	YDR328C	GLT1	Q12680	2145 aa	Known RBP	6.68	□□□□□ -1.34
SKP1	YDR328C	CAR2	P07991	424 aa	Known RBP	6.68	□□□□□ -1.34
SKP1	YDR328C	YSF3	P0C074	85 aa	Predicted RBP	6.68	□□□□□ -1.34
SKP1	YDR328C	URE2	P23202	354 aa	Known RBP	6.68	□□□□□ -1.34
SKP1	YDR328C	CNA1	P23287	553 aa		6.68	□□□□□ -1.34
SKP1	YDR328C	NAR1	P23503	491 aa	Known RBP	6.68	□□□□□ -1.34
SKP1	YDR328C	YCR100C	P25606	316 aa		6.68	□□□□□ -1.34
SKP1	YDR328C	HBS1	P32769	611 aa	Known RBP	6.68	□□□□□ -1.34
SKP1	YDR328C	ECM15	P35195	104 aa		6.68	□□□□□ -1.34
SKP1	YDR328C	YBR138C	P38277	524 aa		6.68	□□□□□ -1.34
SKP1	YDR328C	YLF2	P38746	405 aa		6.68	□□□□□ -1.34
SKP1	YDR328C	PEX18	P38855	283 aa		6.68	□□□□□ -1.34
SKP1	YDR328C	YHR219W	P38900	624 aa		6.68	□□□□□ -1.34
SKP1	YDR328C	RRG9	P40156	214 aa		6.68	□□□□□ -1.34
SKP1	YDR328C	YIL067C	P40514	678 aa		6.68	□□□□□ -1.34
SKP1	YDR328C	BAP3	P41815	604 aa		6.68	□□□□□ -1.34
SKP1	YDR328C	CHA4	P43634	648 aa		6.68	□□□□□ -1.34
SKP1	YDR328C	MDV1	P47025	714 aa		6.68	□□□□□ -1.34
SKP1	YDR328C	YJR141W	P47172	347 aa	Predicted RBP	6.68	□□□□□ -1.34
SKP1	YDR328C	BAT2	P47176	376 aa	Known RBP	6.68	□□□□□ -1.34
SKP1	YDR328C	EXG2	P52911	562 aa		6.68	□□□□□ -1.34
SKP1	YDR328C	TMA20	P89886	181 aa	Predicted RBP	6.68	□□□□□ -1.34
SKP1	YDR328C	YLR345W	Q06137	509 aa		6.68	□□□□□ -1.34
SKP1	YDR328C	ATG17	Q06410	417 aa		6.68	□□□□□ -1.34
SKP1	YDR328C	BDS1	Q08347	646 aa		6.68	□□□□□ -1.34
SKP1	YDR328C	SKI7	Q08491	747 aa	Predicted RBP	6.68	□□□□□ -1.34
SKP1	YDR328C	FRE7	Q12333	620 aa		6.68	□□□□□ -1.34
SKP1	YDR328C	PST2	Q12335	198 aa	Known RBP	6.68	□□□□□ -1.34
SKP1	YDR328C	MED11	Q99278	115 aa		6.68	□□□□□ -1.34
SKP1	YDR328C	BUD5	P25300	642 aa	Predicted RBP	6.67	□□□□□ -1.34
SKP1	YDR328C	YME2	P32843	850 aa		6.67	□□□□□ -1.34
SKP1	YDR328C	SNU114	P36048	1008 aa	Known RBP	6.67	□□□□□ -1.34

Retrieved 100 of 5,963 RNA–protein pairs in 79.8 ms