RNA–Protein interactions for RNA: YDR206W

EBS1, Transcript of Protein involved in translation inhibition and nonsense-mediated decay, yeast

Gene EBS1, Length 2,655 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
EBS1	YDR206W	GCN20	P43535	752 aa	Known RBP	3.18	□□□□□ -1.9
EBS1	YDR206W	GUF1	P46943	645 aa		3.18	□□□□□ -1.9
EBS1	YDR206W	FRE4	P53746	719 aa		3.18	□□□□□ -1.9
EBS1	YDR206W	SAM50	P53969	484 aa		3.18	□□□□□ -1.9
EBS1	YDR206W	URB1	P34241	1764 aa	Known RBP	3.18	□□□□□ -1.9
EBS1	YDR206W	HEM2	P05373	342 aa		3.17	□□□□□ -1.9
EBS1	YDR206W	POL30	P15873	258 aa	Known RBP	3.17	□□□□□ -1.9
EBS1	YDR206W	FAR1	P21268	830 aa		3.17	□□□□□ -1.9
EBS1	YDR206W	DAL2	P25335	343 aa		3.17	□□□□□ -1.9
EBS1	YDR206W	CIN8	P27895	1000 aa		3.17	□□□□□ -1.9
EBS1	YDR206W	IMP3	P32899	183 aa	Predicted RBP	3.17	□□□□□ -1.9
EBS1	YDR206W	CBP4	P37267	147 aa		3.17	□□□□□ -1.9
EBS1	YDR206W	UBP5	P39944	805 aa		3.17	□□□□□ -1.9
EBS1	YDR206W	INA22	P40576	216 aa		3.17	□□□□□ -1.9
EBS1	YDR206W	ADF1	Q2V2Q1	113 aa		3.17	□□□□□ -1.9
EBS1	YDR206W	PRP16	P15938	1071 aa	Predicted RBP	3.17	□□□□□ -1.9
EBS1	YDR206W	CDC43	P18898	376 aa		3.17	□□□□□ -1.9
EBS1	YDR206W	SAR1	P20606	190 aa	Known RBP	3.17	□□□□□ -1.9
EBS1	YDR206W	MBR1	P23493	339 aa		3.17	□□□□□ -1.9
EBS1	YDR206W	ADY2	P25613	283 aa		3.17	□□□□□ -1.9
EBS1	YDR206W	DOA4	P32571	926 aa		3.17	□□□□□ -1.9
EBS1	YDR206W	SPT10	P35208	640 aa		3.17	□□□□□ -1.9
EBS1	YDR206W	TAE1	P38340	232 aa		3.17	□□□□□ -1.9
EBS1	YDR206W	VPS52	P39904	641 aa		3.17	□□□□□ -1.9
EBS1	YDR206W	LYS12	P40495	371 aa	Known RBP	3.17	□□□□□ -1.9
EBS1	YDR206W	SMP3	Q04174	516 aa		3.17	□□□□□ -1.9
EBS1	YDR206W	DNL4	Q08387	944 aa	Predicted RBP	3.17	□□□□□ -1.9
EBS1	YDR206W	SLM3	Q12093	417 aa		3.17	□□□□□ -1.9
EBS1	YDR206W	YOR338W	Q99326	363 aa		3.17	□□□□□ -1.9
EBS1	YDR206W	MHP1	P43638	1398 aa		3.17	□□□□□ -1.9
EBS1	YDR206W	RAD1	P06777	1100 aa		3.16	□□□□□ -1.9
EBS1	YDR206W	YLL053C	P0CD98	152 aa		3.16	□□□□□ -1.9
EBS1	YDR206W	FRS2	P15625	503 aa	Known RBP	3.16	□□□□□ -1.9
EBS1	YDR206W	LSB5	P25369	354 aa		3.16	□□□□□ -1.9
EBS1	YDR206W	YCR022C	P25620	114 aa		3.16	□□□□□ -1.9
EBS1	YDR206W	SPR1	P32603	445 aa		3.16	□□□□□ -1.9
EBS1	YDR206W	PDR3	P33200	976 aa		3.16	□□□□□ -1.9
EBS1	YDR206W	MRPS5	P33759	307 aa		3.16	□□□□□ -1.9
EBS1	YDR206W	OAR1	P35731	278 aa		3.16	□□□□□ -1.9
EBS1	YDR206W	YCR041W	P37265	110 aa		3.16	□□□□□ -1.9
EBS1	YDR206W	ATG7	P38862	630 aa		3.16	□□□□□ -1.9
EBS1	YDR206W	LYS1	P38998	373 aa	RIP-Chip data	3.16	□□□□□ -1.9	RIP-Chip
EBS1	YDR206W	RCY1	P39531	840 aa		3.16	□□□□□ -1.9
EBS1	YDR206W	RTS2	P40962	232 aa		3.16	□□□□□ -1.9
EBS1	YDR206W	EMC2	P47133	292 aa	Known RBP	3.16	□□□□□ -1.9
EBS1	YDR206W	SRL4	Q03085	281 aa		3.16	□□□□□ -1.9
EBS1	YDR206W	ATC1	Q04005	294 aa		3.16	□□□□□ -1.9
EBS1	YDR206W	NRT1	Q08485	598 aa		3.16	□□□□□ -1.9
EBS1	YDR206W	YRM1	Q12340	786 aa		3.16	□□□□□ -1.9
EBS1	YDR206W	APC1	P53886	1748 aa		3.16	□□□□□ -1.9
EBS1	YDR206W	MLP1	Q02455	1875 aa	Known RBP	3.16	□□□□□ -1.9
EBS1	YDR206W	FKS3	Q04952	1785 aa		3.16	□□□□□ -1.9
EBS1	YDR206W	DEG1	P31115	442 aa	Known RBP	3.16	□□□□□ -1.9
EBS1	YDR206W	ARO4	P32449	370 aa	Known RBP	3.16	□□□□□ -1.9
EBS1	YDR206W	ECM15	P35195	104 aa		3.16	□□□□□ -1.9
EBS1	YDR206W	RPC25	P35718	212 aa		3.16	□□□□□ -1.9
EBS1	YDR206W	FRE2	P36033	711 aa		3.16	□□□□□ -1.9
EBS1	YDR206W	SLM1	P40485	686 aa		3.16	□□□□□ -1.9
EBS1	YDR206W	YAR1	P46683	200 aa		3.16	□□□□□ -1.9
EBS1	YDR206W	LOH1	P47055	219 aa		3.16	□□□□□ -1.9
EBS1	YDR206W	YNR048W	P53740	393 aa		3.16	□□□□□ -1.9
EBS1	YDR206W	RSC9	Q03124	581 aa		3.16	□□□□□ -1.9
EBS1	YDR206W	RSN1	Q03516	953 aa		3.16	□□□□□ -1.9
EBS1	YDR206W	NAT4	Q04751	285 aa		3.16	□□□□□ -1.9
EBS1	YDR206W	GLO2	Q05584	274 aa		3.16	□□□□□ -1.9
EBS1	YDR206W	OSW1	Q08692	278 aa		3.16	□□□□□ -1.9
EBS1	YDR206W	ARP6	Q12509	438 aa		3.16	□□□□□ -1.9
EBS1	YDR206W	RPS24A	P0CX31	135 aa	Known RBP	3.16	□□□□□ -1.9
EBS1	YDR206W	RPS24B	P0CX32	135 aa	Known RBP	3.16	□□□□□ -1.9
EBS1	YDR206W	ARF1	P11076	181 aa	Known RBP	3.16	□□□□□ -1.9
EBS1	YDR206W	CDC42	P19073	191 aa		3.16	□□□□□ -1.9
EBS1	YDR206W	PRS1	P32895	427 aa	Known RBP	3.16	□□□□□ -1.9
EBS1	YDR206W	LOS1	P33418	1100 aa	Predicted RBP	3.16	□□□□□ -1.9
EBS1	YDR206W	RRT5	P43607	289 aa		3.16	□□□□□ -1.9
EBS1	YDR206W	LIA1	P47120	325 aa	Known RBP	3.16	□□□□□ -1.9
EBS1	YDR206W	ATP23	P53722	227 aa		3.16	□□□□□ -1.9
EBS1	YDR206W	YNL260C	P53846	198 aa		3.16	□□□□□ -1.9
EBS1	YDR206W	PNG1	Q02890	363 aa		3.16	□□□□□ -1.9
EBS1	YDR206W	COQ11	Q05892	277 aa		3.16	□□□□□ -1.9
EBS1	YDR206W	YOL107W	Q12239	342 aa		3.16	□□□□□ -1.9
EBS1	YDR206W	AHC1	Q12433	566 aa		3.16	□□□□□ -1.9
EBS1	YDR206W	JIP3	O13555	125 aa		3.15	□□□□□ -1.91
EBS1	YDR206W	GPI12	P23797	304 aa		3.15	□□□□□ -1.91
EBS1	YDR206W	SLM5	P25345	492 aa	Known RBP	3.15	□□□□□ -1.91
EBS1	YDR206W	DPH5	P32469	300 aa	Predicted RBP	3.15	□□□□□ -1.91
EBS1	YDR206W	CCT4	P39078	528 aa	Known RBP	3.15	□□□□□ -1.91
EBS1	YDR206W	BTT1	P40314	149 aa	Predicted RBP	3.15	□□□□□ -1.91
EBS1	YDR206W	YFL040W	P43562	540 aa		3.15	□□□□□ -1.91
EBS1	YDR206W	NAS6	P50086	228 aa		3.15	□□□□□ -1.91
EBS1	YDR206W	ESBP6	P53918	673 aa		3.15	□□□□□ -1.91
EBS1	YDR206W	IRC10	Q08118	586 aa		3.15	□□□□□ -1.91
EBS1	YDR206W	ATG31	Q12421	196 aa		3.15	□□□□□ -1.91
EBS1	YDR206W	YIL177C	P40434	1758 aa		3.15	□□□□□ -1.91
EBS1	YDR206W	YJL225C	P40889	1758 aa		3.15	□□□□□ -1.91
EBS1	YDR206W	TDH3	P00359	332 aa	Known RBP RIP-Chip data	3.15	□□□□□ -1.91	not detected
EBS1	YDR206W	COX2	P00410	251 aa		3.15	□□□□□ -1.91
EBS1	YDR206W	YER190C-B	P0CX94	160 aa		3.15	□□□□□ -1.91
EBS1	YDR206W	YEL077W-A	P0CX95	160 aa		3.15	□□□□□ -1.91
EBS1	YDR206W	YGR296C-B	P0CX96	160 aa		3.15	□□□□□ -1.91
EBS1	YDR206W	YPL283W-B	P0CX97	160 aa		3.15	□□□□□ -1.91

Retrieved 100 of 5,963 RNA–protein pairs in 32.3 ms