RNA–Protein interactions for RNA: YDR171W

HSP42, Transcript of Small heat shock protein (sHSP) with chaperone activity, yeastyeast

Gene HSP42, Length 1,128 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HSP42YDR171W YKL100CP34248 587 aa3.98□□□□□ -1.77
HSP42YDR171W CST26P38226 397 aa3.98□□□□□ -1.77
HSP42YDR171W ECM8P38246 354 aa3.98□□□□□ -1.77
HSP42YDR171W YHI9P38765 294 aa3.98□□□□□ -1.77
HSP42YDR171W LSM12P38828 187 aaKnown RBP3.98□□□□□ -1.77
HSP42YDR171W KEL1P38853 1164 aaKnown RBP3.98□□□□□ -1.77
HSP42YDR171W SOP4P39543 234 aaPredicted RBP3.98□□□□□ -1.77
HSP42YDR171W DDI1P40087 428 aa3.98□□□□□ -1.77
HSP42YDR171W HXT9P40885 567 aa3.98□□□□□ -1.77
HSP42YDR171W YJL132WP47014 750 aa3.98□□□□□ -1.77
HSP42YDR171W RTT101P47050 842 aa3.98□□□□□ -1.77
HSP42YDR171W IPI3P53877 555 aa3.98□□□□□ -1.77
HSP42YDR171W REX2P54964 269 aaKnown RBP3.98□□□□□ -1.77
HSP42YDR171W RNY1Q02933 434 aaKnown RBP3.98□□□□□ -1.77
HSP42YDR171W PEX12Q04370 399 aa3.98□□□□□ -1.77
HSP42YDR171W YMR034CQ05131 434 aaPredicted RBP3.98□□□□□ -1.77
HSP42YDR171W NEJ1Q06148 342 aa3.98□□□□□ -1.77
HSP42YDR171W YLR413WQ06689 675 aa3.98□□□□□ -1.77
HSP42YDR171W YDL121CQ07541 149 aa3.98□□□□□ -1.77
HSP42YDR171W SNA4Q07549 140 aa3.98□□□□□ -1.77
HSP42YDR171W DTD1Q07648 150 aaKnown RBP3.98□□□□□ -1.77
HSP42YDR171W YOL019WQ08157 551 aa3.98□□□□□ -1.77
HSP42YDR171W PGC1Q08959 321 aa3.98□□□□□ -1.77
HSP42YDR171W YDL109CQ12103 647 aa3.98□□□□□ -1.77
HSP42YDR171W YOR214CQ12282 236 aa3.98□□□□□ -1.77
HSP42YDR171W APC2Q12440 853 aa3.98□□□□□ -1.77
HSP42YDR171W FMP16Q12497 93 aa3.98□□□□□ -1.77
HSP42YDR171W IPP1P00817 287 aaKnown RBP3.97□□□□□ -1.77
HSP42YDR171W CAP2P13517 287 aa3.97□□□□□ -1.77
HSP42YDR171W SAR1P20606 190 aaKnown RBP3.97□□□□□ -1.77
HSP42YDR171W CPR3P25719 182 aa3.97□□□□□ -1.77
HSP42YDR171W SPT14P32363 452 aa3.97□□□□□ -1.77
HSP42YDR171W MRP4P32902 394 aa3.97□□□□□ -1.77
HSP42YDR171W PPQ1P32945 549 aa3.97□□□□□ -1.77
HSP42YDR171W TAF14P35189 244 aa3.97□□□□□ -1.77
HSP42YDR171W UBP11P36026 717 aa3.97□□□□□ -1.77
HSP42YDR171W ANR2P36090 516 aaPredicted RBP3.97□□□□□ -1.77
HSP42YDR171W NOP4P37838 685 aaKnown RBP3.97□□□□□ -1.77
HSP42YDR171W STP2P38704 541 aa3.97□□□□□ -1.77
HSP42YDR171W ANS1P38832 159 aa3.97□□□□□ -1.77
HSP42YDR171W YHR218WP38899 603 aa3.97□□□□□ -1.77
HSP42YDR171W IPT1P38954 527 aa3.97□□□□□ -1.77
HSP42YDR171W RBG1P39729 369 aa3.97□□□□□ -1.77
HSP42YDR171W ALD5P40047 520 aaKnown RBP3.97□□□□□ -1.77
HSP42YDR171W YIL054WP40524 105 aa3.97□□□□□ -1.77
HSP42YDR171W YGR210CP42942 411 aa3.97□□□□□ -1.77
HSP42YDR171W COS4P43542 379 aa3.97□□□□□ -1.77
HSP42YDR171W GCD14P46959 383 aaPredicted RBP3.97□□□□□ -1.77
HSP42YDR171W APS3P47064 194 aa3.97□□□□□ -1.77
HSP42YDR171W ASN2P49090 572 aaKnown RBP3.97□□□□□ -1.77
HSP42YDR171W YPT32P51996 222 aaKnown RBP3.97□□□□□ -1.77
HSP42YDR171W BUD32P53323 261 aa3.97□□□□□ -1.77
HSP42YDR171W ARE2P53629 642 aaKnown RBP3.97□□□□□ -1.77
HSP42YDR171W YNL234WP53857 426 aa3.97□□□□□ -1.77
HSP42YDR171W VAC7P53950 1165 aa3.97□□□□□ -1.77
HSP42YDR171W DID2P69771 204 aa3.97□□□□□ -1.77
HSP42YDR171W YPL068CQ02749 293 aa3.97□□□□□ -1.77
HSP42YDR171W INA17Q02888 182 aa3.97□□□□□ -1.77
HSP42YDR171W CDC123Q05791 360 aa3.97□□□□□ -1.77
HSP42YDR171W UTP21Q06078 939 aaPredicted RBP3.97□□□□□ -1.77
HSP42YDR171W DCS1Q06151 350 aa3.97□□□□□ -1.77
HSP42YDR171W YLL032CQ07834 825 aaKnown RBP RIP-Chip data3.97□□□□□ -1.77not detected
HSP42YDR171W ESA1Q08649 445 aa3.97□□□□□ -1.77
HSP42YDR171W UBX3Q12229 455 aa3.97□□□□□ -1.77
HSP42YDR171W GTT2Q12390 233 aa3.97□□□□□ -1.77
HSP42YDR171W YPR1Q12458 312 aa3.97□□□□□ -1.77
HSP42YDR171W PFK27Q12471 397 aaPredicted RBP3.97□□□□□ -1.77
HSP42YDR171W YMR030W-AQ3E760 96 aa3.97□□□□□ -1.77
HSP42YDR171W MHF1Q3E835 90 aa3.97□□□□□ -1.77
HSP42YDR171W RIB3Q99258 208 aa3.97□□□□□ -1.77
HSP42YDR171W SAS5Q99314 248 aa3.97□□□□□ -1.77
HSP42YDR171W THP2O13539 261 aaKnown RBP3.96□□□□□ -1.78
HSP42YDR171W COS2P0CX12 379 aa3.96□□□□□ -1.78
HSP42YDR171W COS3P0CX13 379 aa3.96□□□□□ -1.78
HSP42YDR171W MET16P18408 261 aaPredicted RBP3.96□□□□□ -1.78
HSP42YDR171W CCA1P21269 546 aa3.96□□□□□ -1.78
HSP42YDR171W DBR1P24309 405 aaKnown RBP3.96□□□□□ -1.78
HSP42YDR171W PUP3P25451 205 aaKnown RBP3.96□□□□□ -1.78
HSP42YDR171W PPZ1P26570 692 aa3.96□□□□□ -1.78
HSP42YDR171W UBC8P28263 218 aa3.96□□□□□ -1.78
HSP42YDR171W IMP3P32899 183 aaPredicted RBP3.96□□□□□ -1.78
HSP42YDR171W PTC1P35182 281 aa3.96□□□□□ -1.78
HSP42YDR171W SNU114P36048 1008 aaKnown RBP3.96□□□□□ -1.78
HSP42YDR171W ARA1P38115 344 aa3.96□□□□□ -1.78
HSP42YDR171W ROT2P38138 954 aa3.96□□□□□ -1.78
HSP42YDR171W GPX2P38143 162 aa3.96□□□□□ -1.78
HSP42YDR171W LEU5P38702 357 aa3.96□□□□□ -1.78
HSP42YDR171W ARN2P38724 620 aa3.96□□□□□ -1.78
HSP42YDR171W IPI1P38803 334 aaPredicted RBP3.96□□□□□ -1.78
HSP42YDR171W NDT80P38830 627 aa3.96□□□□□ -1.78
HSP42YDR171W YHR182WP38870 785 aa3.96□□□□□ -1.78
HSP42YDR171W MNN9P39107 395 aaKnown RBP3.96□□□□□ -1.78
HSP42YDR171W YAT2P40017 923 aa3.96□□□□□ -1.78
HSP42YDR171W YIL060WP40519 144 aa3.96□□□□□ -1.78
HSP42YDR171W STR3P53101 465 aaKnown RBP3.96□□□□□ -1.78
HSP42YDR171W LIF1P53150 421 aa3.96□□□□□ -1.78
HSP42YDR171W SOL4P53315 255 aa3.96□□□□□ -1.78
HSP42YDR171W ZRG17P53735 605 aa3.96□□□□□ -1.78
HSP42YDR171W YNR068CP53754 272 aa3.96□□□□□ -1.78
HSP42YDR171W TOF2Q02208 771 aa3.96□□□□□ -1.78
Retrieved 100 of 5,963 RNA–protein pairs in 16.1 ms