RNA–Protein interactions for RNA: YDL017W

CDC7, Transcript of DDK (Dbf4-dependent kinase) catalytic subunit, yeast

Gene CDC7, Length 1,524 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CDC7	YDL017W	COX3	P00420	269 aa		6.61	□□□□□ -1.35
CDC7	YDL017W	CAR2	P07991	424 aa	Known RBP	6.61	□□□□□ -1.35
CDC7	YDL017W	MET2	P08465	486 aa		6.61	□□□□□ -1.35
CDC7	YDL017W	HOM2	P13663	365 aa	Known RBP	6.61	□□□□□ -1.35
CDC7	YDL017W	RPB5	P20434	215 aa		6.61	□□□□□ -1.35
CDC7	YDL017W	YCK1	P23291	538 aa		6.61	□□□□□ -1.35
CDC7	YDL017W	CMK1	P27466	446 aa	Known RBP	6.61	□□□□□ -1.35
CDC7	YDL017W	WSC4	P38739	605 aa		6.61	□□□□□ -1.35
CDC7	YDL017W	MDM31	P38880	579 aa		6.61	□□□□□ -1.35
CDC7	YDL017W	LYS1	P38998	373 aa	RIP-Chip data	6.61	□□□□□ -1.35	not detected
CDC7	YDL017W	CEM1	P39525	442 aa		6.61	□□□□□ -1.35
CDC7	YDL017W	GDI1	P39958	451 aa	Known RBP	6.61	□□□□□ -1.35
CDC7	YDL017W	ZRG8	P40021	1076 aa		6.61	□□□□□ -1.35
CDC7	YDL017W	TIF34	P40217	347 aa	Known RBP	6.61	□□□□□ -1.35
CDC7	YDL017W	LRO1	P40345	661 aa		6.61	□□□□□ -1.35
CDC7	YDL017W	IRC7	P43623	340 aa		6.61	□□□□□ -1.35
CDC7	YDL017W	HXT16	P47185	567 aa		6.61	□□□□□ -1.35
CDC7	YDL017W	RIM21	P48565	533 aa		6.61	□□□□□ -1.35
CDC7	YDL017W	CTL1	Q03220	320 aa	Known RBP	6.61	□□□□□ -1.35
CDC7	YDL017W	RCF1	Q03713	159 aa		6.61	□□□□□ -1.35
CDC7	YDL017W	YDR444W	Q04093	687 aa		6.61	□□□□□ -1.35
CDC7	YDL017W	YMR087W	Q04299	284 aa		6.61	□□□□□ -1.35
CDC7	YDL017W	YPS7	Q06325	596 aa		6.61	□□□□□ -1.35
CDC7	YDL017W	MMT2	Q08970	484 aa		6.61	□□□□□ -1.35
CDC7	YDL017W	YPR015C	Q12531	247 aa		6.61	□□□□□ -1.35
CDC7	YDL017W	MEX67	Q99257	599 aa	Known RBP	6.61	□□□□□ -1.35
CDC7	YDL017W	MOD5	P07884	428 aa		6.6	□□□□□ -1.35
CDC7	YDL017W	CBS1	P14066	229 aa		6.6	□□□□□ -1.35
CDC7	YDL017W	MGR1	P25573	417 aa		6.6	□□□□□ -1.35
CDC7	YDL017W	RCN1	P36054	211 aa		6.6	□□□□□ -1.35
CDC7	YDL017W	YHK8	P38776	514 aa		6.6	□□□□□ -1.35
CDC7	YDL017W	YHR219W	P38900	624 aa		6.6	□□□□□ -1.35
CDC7	YDL017W	GID8	P40208	455 aa		6.6	□□□□□ -1.35
CDC7	YDL017W	RPL10	P41805	221 aa	Known RBP	6.6	□□□□□ -1.35
CDC7	YDL017W	REC102	Q02721	264 aa		6.6	□□□□□ -1.35
CDC7	YDL017W	ELP6	Q04868	273 aa		6.6	□□□□□ -1.35
CDC7	YDL017W	PEX10	Q05568	337 aa		6.6	□□□□□ -1.35
CDC7	YDL017W	FDH1	Q08911	376 aa		6.6	□□□□□ -1.35
CDC7	YDL017W	TAH1	P25638	111 aa	Predicted RBP	6.6	□□□□□ -1.35
CDC7	YDL017W	YJU2	P28320	278 aa	Predicted RBP	6.6	□□□□□ -1.35
CDC7	YDL017W	CDC13	P32797	924 aa	Known RBP	6.6	□□□□□ -1.35
CDC7	YDL017W	SEC61	P32915	480 aa		6.6	□□□□□ -1.35
CDC7	YDL017W	EHT1	P38295	451 aa		6.6	□□□□□ -1.35
CDC7	YDL017W	YHR097C	P38809	366 aa	Known RBP	6.6	□□□□□ -1.35
CDC7	YDL017W	AIM10	P39965	576 aa	Known RBP	6.6	□□□□□ -1.35
CDC7	YDL017W	YEL068C	P39977	110 aa		6.6	□□□□□ -1.35
CDC7	YDL017W	YTA6	P40328	754 aa		6.6	□□□□□ -1.35
CDC7	YDL017W	YJL218W	P40892	196 aa	Known RBP	6.6	□□□□□ -1.35
CDC7	YDL017W	BAT2	P47176	376 aa	Known RBP	6.6	□□□□□ -1.35
CDC7	YDL017W	MAL11	P53048	616 aa		6.6	□□□□□ -1.35
CDC7	YDL017W	MKC7	P53379	596 aa		6.6	□□□□□ -1.35
CDC7	YDL017W	BUD17	P53727	317 aa		6.6	□□□□□ -1.35
CDC7	YDL017W	DBP6	P53734	629 aa	Known RBP	6.6	□□□□□ -1.35
CDC7	YDL017W	COS1	P53822	381 aa		6.6	□□□□□ -1.35
CDC7	YDL017W	ELP4	Q02884	456 aa	Known RBP	6.6	□□□□□ -1.35
CDC7	YDL017W	FIN1	Q03898	291 aa		6.6	□□□□□ -1.35
CDC7	YDL017W	GLO4	Q12320	285 aa		6.6	□□□□□ -1.35
CDC7	YDL017W	RKM5	Q12367	367 aa		6.6	□□□□□ -1.35
CDC7	YDL017W	RPS21B	Q3E754	87 aa	Known RBP	6.6	□□□□□ -1.35
CDC7	YDL017W	LAG2	Q92325	660 aa		6.6	□□□□□ -1.35
CDC7	YDL017W	YMR084W	A2P2R3	262 aa		6.59	□□□□□ -1.35
CDC7	YDL017W	GCN3	P14741	305 aa		6.59	□□□□□ -1.35
CDC7	YDL017W	SNF6	P18888	332 aa		6.59	□□□□□ -1.35
CDC7	YDL017W	RNQ1	P25367	405 aa		6.59	□□□□□ -1.35
CDC7	YDL017W	PTC6	P25646	442 aa		6.59	□□□□□ -1.35
CDC7	YDL017W	PRO1	P32264	428 aa		6.59	□□□□□ -1.35
CDC7	YDL017W	SKN1	P33336	771 aa		6.59	□□□□□ -1.35
CDC7	YDL017W	ZRT3	P34240	503 aa		6.59	□□□□□ -1.35
CDC7	YDL017W	SRX1	P36077	127 aa		6.59	□□□□□ -1.35
CDC7	YDL017W	YHR035W	P38769	630 aa		6.59	□□□□□ -1.35
CDC7	YDL017W	NVJ1	P38881	321 aa		6.59	□□□□□ -1.35
CDC7	YDL017W	ALP1	P38971	573 aa		6.59	□□□□□ -1.35
CDC7	YDL017W	RPS12	P48589	143 aa	Known RBP	6.59	□□□□□ -1.35
CDC7	YDL017W	TOS2	P50078	622 aa		6.59	□□□□□ -1.35
CDC7	YDL017W	MNN10	P50108	393 aa	Known RBP	6.59	□□□□□ -1.35
CDC7	YDL017W	LSG1	P53145	640 aa	Known RBP	6.59	□□□□□ -1.35
CDC7	YDL017W	CWC24	P53769	259 aa		6.59	□□□□□ -1.35
CDC7	YDL017W	YPL068C	Q02749	293 aa		6.59	□□□□□ -1.35
CDC7	YDL017W	NAT4	Q04751	285 aa		6.59	□□□□□ -1.35
CDC7	YDL017W	VID22	Q05934	901 aa		6.59	□□□□□ -1.35
CDC7	YDL017W	YLR040C	Q07988	224 aa		6.59	□□□□□ -1.35
CDC7	YDL017W	SKI7	Q08491	747 aa	Predicted RBP	6.59	□□□□□ -1.35
CDC7	YDL017W	BMT6	Q12291	365 aa		6.59	□□□□□ -1.35
CDC7	YDL017W	YOR019W	Q99248	730 aa		6.59	□□□□□ -1.35
CDC7	YDL017W	ADE5,7	P07244	802 aa	Known RBP	6.58	□□□□□ -1.36
CDC7	YDL017W	PRP2	P20095	876 aa	Predicted RBP	6.58	□□□□□ -1.36
CDC7	YDL017W	PTP1	P25044	335 aa		6.58	□□□□□ -1.36
CDC7	YDL017W	CHA1	P25379	360 aa	Known RBP	6.58	□□□□□ -1.36
CDC7	YDL017W	SPT14	P32363	452 aa		6.58	□□□□□ -1.36
CDC7	YDL017W	SUR1	P33300	382 aa		6.58	□□□□□ -1.36
CDC7	YDL017W	MSN2	P33748	704 aa		6.58	□□□□□ -1.36
CDC7	YDL017W	IPI1	P38803	334 aa	Predicted RBP	6.58	□□□□□ -1.36
CDC7	YDL017W	MNL1	P38888	796 aa		6.58	□□□□□ -1.36
CDC7	YDL017W	ELO1	P39540	310 aa		6.58	□□□□□ -1.36
CDC7	YDL017W	IRC6	P43615	237 aa		6.58	□□□□□ -1.36
CDC7	YDL017W	YAE1	P47118	141 aa	Predicted RBP	6.58	□□□□□ -1.36
CDC7	YDL017W	AAD10	P47182	288 aa		6.58	□□□□□ -1.36
CDC7	YDL017W	ARO8	P53090	500 aa	Known RBP	6.58	□□□□□ -1.36
CDC7	YDL017W	SWS2	P53937	143 aa		6.58	□□□□□ -1.36
CDC7	YDL017W	EGD1	Q02642	157 aa	Known RBP	6.58	□□□□□ -1.36

Retrieved 100 of 5,963 RNA–protein pairs in 21.9 ms