RNA–Protein interactions for RNA: YBR288C

APM3, Transcript of Mu3-like subunit of the clathrin associated protein complex (AP-3), yeastyeast

Gene APM3, Length 1,452 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
APM3YBR288C RRN9P53437 365 aa2.58□□□□□ -2
APM3YBR288C REX2P54964 269 aaKnown RBP2.58□□□□□ -2
APM3YBR288C YDR341CQ05506 607 aaKnown RBP2.58□□□□□ -2
APM3YBR288C TPK3P05986 398 aa2.58□□□□□ -2
APM3YBR288C RPS19AP07280 144 aaKnown RBP2.58□□□□□ -2
APM3YBR288C RPS19BP07281 144 aaPredicted RBP2.58□□□□□ -2
APM3YBR288C SLM5P25345 492 aaKnown RBP2.58□□□□□ -2
APM3YBR288C PRY2P36110 329 aa2.58□□□□□ -2
APM3YBR288C FAD1P38913 306 aa2.58□□□□□ -2
APM3YBR288C HEM14P40012 539 aa2.58□□□□□ -2
APM3YBR288C PRP38Q00723 242 aaPredicted RBP2.58□□□□□ -2
APM3YBR288C YDR115WQ04598 105 aa2.58□□□□□ -2
APM3YBR288C MSC3Q05812 728 aa2.58□□□□□ -2
APM3YBR288C YLR177WQ06251 628 aa2.58□□□□□ -2
APM3YBR288C YPR195CQ06594 109 aa2.58□□□□□ -2
APM3YBR288C RPS18AP0CX55 146 aaKnown RBP2.57□□□□□ -2
APM3YBR288C RPS18BP0CX56 146 aaPredicted RBP2.57□□□□□ -2
APM3YBR288C ZIM17P42844 174 aa2.57□□□□□ -2
APM3YBR288C TRF5P48561 642 aaKnown RBP2.57□□□□□ -2
APM3YBR288C YLR456WQ06199 204 aa2.57□□□□□ -2
APM3YBR288C ECM7Q06200 448 aa2.57□□□□□ -2
APM3YBR288C ASP3-2P0CX77 362 aa2.56□□□□□ -2
APM3YBR288C ASP3-3P0CX78 362 aa2.56□□□□□ -2
APM3YBR288C ASP3-4P0CX79 362 aa2.56□□□□□ -2
APM3YBR288C ASP3-1P0CZ17 362 aa2.56□□□□□ -2
APM3YBR288C CPR2P23285 205 aa2.56□□□□□ -2
APM3YBR288C IME2P32581 645 aa2.56□□□□□ -2
APM3YBR288C JNM1P36224 373 aa2.56□□□□□ -2
APM3YBR288C QDR3P38227 689 aa2.56□□□□□ -2
APM3YBR288C FHL1P39521 936 aa2.56□□□□□ -2
APM3YBR288C PMT5P52867 743 aa2.56□□□□□ -2
APM3YBR288C VEL1P53058 206 aa2.56□□□□□ -2
APM3YBR288C NSE1Q07913 336 aa2.56□□□□□ -2
APM3YBR288C RPL12AP0CX53 165 aaKnown RBP2.55□□□□□ -2
APM3YBR288C RPL12BP0CX54 165 aa2.55□□□□□ -2
APM3YBR288C PDX1P16451 410 aa2.55□□□□□ -2
APM3YBR288C CHA1P25379 360 aaKnown RBP2.55□□□□□ -2
APM3YBR288C TOA1P32773 286 aa2.55□□□□□ -2
APM3YBR288C DOA1P36037 715 aa2.55□□□□□ -2
APM3YBR288C ABM1P47146 123 aa2.55□□□□□ -2
APM3YBR288C VAC7P53950 1165 aa2.55□□□□□ -2
APM3YBR288C ASA1Q06822 443 aa2.55□□□□□ -2
APM3YBR288C YOR376WQ08900 122 aa2.55□□□□□ -2
APM3YBR288C HMS1Q12398 434 aa2.55□□□□□ -2
APM3YBR288C REV3P14284 1504 aa2.54□□□□□ -2
APM3YBR288C RPC53P25441 422 aa2.54□□□□□ -2
APM3YBR288C MSP1P28737 362 aa2.54□□□□□ -2
APM3YBR288C NRP1P32770 719 aaKnown RBP RIP-Chip data2.54□□□□□ -2not detected
APM3YBR288C SMP1P38128 452 aa2.54□□□□□ -2
APM3YBR288C SUB1P54000 292 aaKnown RBP2.54□□□□□ -2
APM3YBR288C PRP3Q03338 469 aaPredicted RBP2.54□□□□□ -2
APM3YBR288C MEX67Q99257 599 aaKnown RBP2.54□□□□□ -2
APM3YBR288C ARF1P11076 181 aaKnown RBP2.53□□□□□ -2
APM3YBR288C TOA2P32774 122 aa2.53□□□□□ -2
APM3YBR288C FRT2P39734 528 aa2.53□□□□□ -2
APM3YBR288C CIN2P46670 268 aa2.53□□□□□ -2
APM3YBR288C COQ5P49017 307 aa2.53□□□□□ -2
APM3YBR288C ROG1P53118 685 aa2.53□□□□□ -2
APM3YBR288C ECM5Q03214 1411 aa2.53□□□□□ -2
APM3YBR288C THO2P53552 1597 aaKnown RBP2.53□□□□□ -2.01
APM3YBR288C PHO91P27514 894 aa2.52□□□□□ -2.01
APM3YBR288C ANP1P32629 500 aa2.52□□□□□ -2.01
APM3YBR288C YSC83P32792 385 aa2.52□□□□□ -2.01
APM3YBR288C CYM1P32898 989 aa2.52□□□□□ -2.01
APM3YBR288C ECM34P38728 170 aa2.52□□□□□ -2.01
APM3YBR288C YGR111WP53265 400 aa2.52□□□□□ -2.01
APM3YBR288C RMT2Q03305 412 aa2.52□□□□□ -2.01
APM3YBR288C URC2Q04411 772 aa2.52□□□□□ -2.01
APM3YBR288C UAF30Q08747 228 aa2.52□□□□□ -2.01
APM3YBR288C SRO7Q12038 1033 aa2.52□□□□□ -2.01
APM3YBR288C SFM1Q12314 213 aa2.52□□□□□ -2.01
APM3YBR288C YMR010WQ03687 405 aa2.52□□□□□ -2.01
APM3YBR288C YOL085CQ99345 113 aa2.52□□□□□ -2.01
APM3YBR288C BUD4P47136 1447 aa2.51□□□□□ -2.01
APM3YBR288C MDS3P53094 1487 aa2.51□□□□□ -2.01
APM3YBR288C HSL1P34244 1518 aa2.51□□□□□ -2.01
APM3YBR288C PDE2P06776 526 aa2.51□□□□□ -2.01
APM3YBR288C EPT1P22140 391 aa2.51□□□□□ -2.01
APM3YBR288C YBR241CP38142 488 aa2.51□□□□□ -2.01
APM3YBR288C NAB3P38996 802 aaKnown RBP RIP-Chip data2.51□□□□□ -2.01not detected
APM3YBR288C DIA1P54005 336 aa2.51□□□□□ -2.01
APM3YBR288C VPS72Q03388 795 aa2.51□□□□□ -2.01
APM3YBR288C SPT6P23615 1451 aaKnown RBP2.5□□□□□ -2.01
APM3YBR288C SEC27P41811 889 aaKnown RBP2.5□□□□□ -2.01
APM3YBR288C FSH2Q05015 223 aa2.5□□□□□ -2.01
APM3YBR288C LDB17Q12342 491 aa2.5□□□□□ -2.01
APM3YBR288C MDH1P17505 334 aaKnown RBP RIP-Chip data2.49□□□□□ -2.01not detected
APM3YBR288C AGA2P32781 87 aa2.49□□□□□ -2.01
APM3YBR288C RCK2P38623 610 aa2.49□□□□□ -2.01
APM3YBR288C PAC11P40960 533 aa2.49□□□□□ -2.01
APM3YBR288C CPR7P47103 393 aa2.49□□□□□ -2.01
APM3YBR288C BIO3P50277 480 aa2.49□□□□□ -2.01
APM3YBR288C HST4P53688 370 aa2.49□□□□□ -2.01
APM3YBR288C RNH201P53942 307 aa2.49□□□□□ -2.01
APM3YBR288C ERO1Q03103 563 aa2.49□□□□□ -2.01
APM3YBR288C LDS2Q08218 356 aa2.49□□□□□ -2.01
APM3YBR288C DCI1Q08558 271 aa2.49□□□□□ -2.01
APM3YBR288C ATP16Q12165 160 aa2.49□□□□□ -2.01
APM3YBR288C ISA2Q12425 185 aa2.49□□□□□ -2.01
APM3YBR288C LDS1P31379 325 aa2.48□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 48 ms