RNA–Protein interactions for RNA: YBR279W

PAF1, Transcript of Component of the Paf1p complex involved in transcription elongation, yeast

Gene PAF1, Length 1,338 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PAF1	YBR279W	EFB1	P32471	206 aa	Known RBP	4.05	□□□□□ -1.76
PAF1	YBR279W	TOA2	P32774	122 aa		4.05	□□□□□ -1.76
PAF1	YBR279W	PRS1	P32895	427 aa	Known RBP	4.05	□□□□□ -1.76
PAF1	YBR279W	YSW1	P38280	609 aa		4.05	□□□□□ -1.76
PAF1	YBR279W	APE4	P38821	490 aa		4.05	□□□□□ -1.76
PAF1	YBR279W	SNL1	P40548	159 aa		4.05	□□□□□ -1.76
PAF1	YBR279W	TIS11	P47977	285 aa		4.05	□□□□□ -1.76
PAF1	YBR279W	BNS1	P50084	137 aa		4.05	□□□□□ -1.76
PAF1	YBR279W	YPL107W	Q02873	248 aa		4.05	□□□□□ -1.76
PAF1	YBR279W	CDC50	P25656	391 aa		4.04	□□□□□ -1.76
PAF1	YBR279W	FAA1	P30624	700 aa	Known RBP	4.04	□□□□□ -1.76
PAF1	YBR279W	LSM12	P38828	187 aa	Known RBP	4.04	□□□□□ -1.76
PAF1	YBR279W	SEC9	P40357	651 aa		4.04	□□□□□ -1.76
PAF1	YBR279W	TRF5	P48561	642 aa	Known RBP	4.04	□□□□□ -1.76
PAF1	YBR279W	PCL1	P24867	279 aa		4.03	□□□□□ -1.76
PAF1	YBR279W	MSK1	P32048	576 aa		4.03	□□□□□ -1.76
PAF1	YBR279W	SPO23	P33757	523 aa		4.03	□□□□□ -1.76
PAF1	YBR279W	ANR2	P36090	516 aa	Predicted RBP	4.03	□□□□□ -1.76
PAF1	YBR279W	OM14	P38325	134 aa		4.03	□□□□□ -1.76
PAF1	YBR279W	YHR177W	P38867	453 aa		4.03	□□□□□ -1.76
PAF1	YBR279W	YER186C	P40101	306 aa		4.03	□□□□□ -1.76
PAF1	YBR279W	LYS12	P40495	371 aa	Known RBP	4.03	□□□□□ -1.76
PAF1	YBR279W	REX2	P54964	269 aa	Known RBP	4.03	□□□□□ -1.76
PAF1	YBR279W	SKI8	Q02793	397 aa	Predicted RBP	4.03	□□□□□ -1.76
PAF1	YBR279W	SHS1	Q07657	551 aa		4.03	□□□□□ -1.76
PAF1	YBR279W	YDL199C	Q12407	687 aa		4.03	□□□□□ -1.76
PAF1	YBR279W	NBL1	Q3E7Y6	73 aa		4.03	□□□□□ -1.76
PAF1	YBR279W	STE7	P06784	515 aa		4.02	□□□□□ -1.77
PAF1	YBR279W	HSP26	P15992	214 aa	Known RBP RIP-Chip data	4.02	□□□□□ -1.77	not detected
PAF1	YBR279W	UBA1	P22515	1024 aa	Known RBP	4.02	□□□□□ -1.77
PAF1	YBR279W	PSO2	P30620	661 aa		4.02	□□□□□ -1.77
PAF1	YBR279W	DEP1	P31385	405 aa		4.02	□□□□□ -1.77
PAF1	YBR279W	VPH1	P32563	840 aa	Known RBP	4.02	□□□□□ -1.77
PAF1	YBR279W	IES6	P32617	166 aa		4.02	□□□□□ -1.77
PAF1	YBR279W	PTI1	P39927	425 aa	Predicted RBP	4.02	□□□□□ -1.77
PAF1	YBR279W	RPA34	P47006	233 aa	Predicted RBP	4.02	□□□□□ -1.77
PAF1	YBR279W	SPT7	P35177	1332 aa		4.02	□□□□□ -1.77
PAF1	YBR279W	RPS18A	P0CX55	146 aa	Known RBP	4.01	□□□□□ -1.77
PAF1	YBR279W	RPS18B	P0CX56	146 aa	Predicted RBP	4.01	□□□□□ -1.77
PAF1	YBR279W	MAS2	P11914	482 aa		4.01	□□□□□ -1.77
PAF1	YBR279W	RPL16A	P26784	199 aa	Known RBP	4.01	□□□□□ -1.77
PAF1	YBR279W	SSE1	P32589	693 aa	Known RBP	4.01	□□□□□ -1.77
PAF1	YBR279W	UTH1	P36135	365 aa		4.01	□□□□□ -1.77
PAF1	YBR279W	LAS1	P36146	502 aa	Predicted RBP	4.01	□□□□□ -1.77
PAF1	YBR279W	BAT1	P38891	393 aa	Known RBP	4.01	□□□□□ -1.77
PAF1	YBR279W	RET3	P53600	189 aa		4.01	□□□□□ -1.77
PAF1	YBR279W	YNR068C	P53754	272 aa		4.01	□□□□□ -1.77
PAF1	YBR279W	SCH9	P11792	824 aa	Known RBP	4	□□□□□ -1.77
PAF1	YBR279W	GPI18	P38211	433 aa		4	□□□□□ -1.77
PAF1	YBR279W	YHR182W	P38870	785 aa		4	□□□□□ -1.77
PAF1	YBR279W	MKC7	P53379	596 aa		4	□□□□□ -1.77
PAF1	YBR279W	MFG1	Q07684	458 aa		4	□□□□□ -1.77
PAF1	YBR279W	GLE1	Q12315	538 aa		4	□□□□□ -1.77
PAF1	YBR279W	HIF1	Q12373	385 aa		4	□□□□□ -1.77
PAF1	YBR279W	YOR338W	Q99326	363 aa		4	□□□□□ -1.77
PAF1	YBR279W	THR4	P16120	514 aa	Known RBP	3.99	□□□□□ -1.77
PAF1	YBR279W	ZRC1	P20107	442 aa		3.99	□□□□□ -1.77
PAF1	YBR279W	GIT1	P25346	518 aa		3.99	□□□□□ -1.77
PAF1	YBR279W	RDS1	P25611	832 aa		3.99	□□□□□ -1.77
PAF1	YBR279W	YMR310C	Q04867	317 aa	Predicted RBP	3.99	□□□□□ -1.77
PAF1	YBR279W	NAT1	P12945	854 aa	Known RBP	3.98	□□□□□ -1.77
PAF1	YBR279W	HMX1	P32339	317 aa		3.98	□□□□□ -1.77
PAF1	YBR279W	DPH2	P32461	534 aa		3.98	□□□□□ -1.77
PAF1	YBR279W	KTR6	P54070	446 aa		3.98	□□□□□ -1.77
PAF1	YBR279W	FOL3	Q12676	427 aa	Predicted RBP	3.98	□□□□□ -1.77
PAF1	YBR279W	FSH3	Q99369	266 aa		3.98	□□□□□ -1.77
PAF1	YBR279W	PSK1	P31374	1356 aa		3.98	□□□□□ -1.77
PAF1	YBR279W	COX4	P04037	155 aa		3.97	□□□□□ -1.77
PAF1	YBR279W	HEM4	P06174	275 aa		3.97	□□□□□ -1.77
PAF1	YBR279W	PRB1	P09232	635 aa		3.97	□□□□□ -1.77
PAF1	YBR279W	MAS1	P10507	462 aa		3.97	□□□□□ -1.77
PAF1	YBR279W	DAP2	P18962	818 aa		3.97	□□□□□ -1.77
PAF1	YBR279W	LDS1	P31379	325 aa		3.97	□□□□□ -1.77
PAF1	YBR279W	ABM1	P47146	123 aa		3.97	□□□□□ -1.77
PAF1	YBR279W	MSC3	Q05812	728 aa		3.97	□□□□□ -1.77
PAF1	YBR279W	NFI1	Q12216	726 aa		3.97	□□□□□ -1.77
PAF1	YBR279W	DBR1	P24309	405 aa	Known RBP	3.96	□□□□□ -1.77
PAF1	YBR279W	VAM7	P32912	316 aa		3.96	□□□□□ -1.77
PAF1	YBR279W	MID2	P36027	376 aa		3.96	□□□□□ -1.77
PAF1	YBR279W	YKR015C	P36111	568 aa		3.96	□□□□□ -1.77
PAF1	YBR279W	SOL2	P37262	315 aa		3.96	□□□□□ -1.77
PAF1	YBR279W	BMT2	P38278	337 aa		3.96	□□□□□ -1.77
PAF1	YBR279W	PFS1	P38872	237 aa		3.96	□□□□□ -1.77
PAF1	YBR279W	TIM17	P39515	158 aa		3.96	□□□□□ -1.77
PAF1	YBR279W	IGD1	P43598	195 aa		3.96	□□□□□ -1.77
PAF1	YBR279W	PRM1	P53835	661 aa		3.96	□□□□□ -1.77
PAF1	YBR279W	AQR1	P53943	586 aa		3.96	□□□□□ -1.77
PAF1	YBR279W	TSA2	Q04120	196 aa		3.96	□□□□□ -1.77
PAF1	YBR279W	DBP9	Q06218	594 aa	Known RBP	3.96	□□□□□ -1.77
PAF1	YBR279W	YDL109C	Q12103	647 aa		3.96	□□□□□ -1.77
PAF1	YBR279W	ADH5	P38113	351 aa	Known RBP	3.95	□□□□□ -1.78
PAF1	YBR279W	MRP21	P38175	177 aa		3.95	□□□□□ -1.78
PAF1	YBR279W	LCP5	P40079	357 aa	Predicted RBP	3.95	□□□□□ -1.78
PAF1	YBR279W	UTP6	Q02354	440 aa	Known RBP	3.95	□□□□□ -1.78
PAF1	YBR279W	GAT3	Q07928	141 aa		3.95	□□□□□ -1.78
PAF1	YBR279W	SFM1	Q12314	213 aa		3.95	□□□□□ -1.78
PAF1	YBR279W	SOD1	P00445	154 aa	Known RBP	3.95	□□□□□ -1.78
PAF1	YBR279W	COS9	P36034	407 aa		3.95	□□□□□ -1.78
PAF1	YBR279W	CIN2	P46670	268 aa		3.95	□□□□□ -1.78
PAF1	YBR279W	YNL143C	P53908	130 aa		3.95	□□□□□ -1.78

Retrieved 100 of 5,963 RNA–protein pairs in 58.7 ms