RNA–Protein interactions for RNA: YBR170C

NPL4, Transcript of Substrate-recruiting cofactor of the Cdc48p-Npl4p-Ufd1p segregase, yeastyeast

Gene NPL4, Length 1,743 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NPL4YBR170C COT1P32798 439 aa3.93□□□□□ -1.78
NPL4YBR170C TRS65P32893 560 aa3.93□□□□□ -1.78
NPL4YBR170C MYO3P36006 1272 aa3.93□□□□□ -1.78
NPL4YBR170C PET100P38958 111 aa3.93□□□□□ -1.78
NPL4YBR170C CCT4P39078 528 aaKnown RBP3.93□□□□□ -1.78
NPL4YBR170C ALG8P40351 577 aa3.93□□□□□ -1.78
NPL4YBR170C HCR1Q05775 265 aaKnown RBP3.93□□□□□ -1.78
NPL4YBR170C FMP16Q12497 93 aa3.93□□□□□ -1.78
NPL4YBR170C RAD1P06777 1100 aa3.92□□□□□ -1.78
NPL4YBR170C MRS3P10566 314 aa3.92□□□□□ -1.78
NPL4YBR170C ECT1P33412 323 aa3.92□□□□□ -1.78
NPL4YBR170C COY1P34237 679 aa3.92□□□□□ -1.78
NPL4YBR170C CHK1P38147 527 aa3.92□□□□□ -1.78
NPL4YBR170C HSM3P38348 480 aa3.92□□□□□ -1.78
NPL4YBR170C ATG7P38862 630 aa3.92□□□□□ -1.78
NPL4YBR170C NAS6P50086 228 aa3.92□□□□□ -1.78
NPL4YBR170C YGL242CP53066 181 aa3.92□□□□□ -1.78
NPL4YBR170C YGR168CP53293 376 aa3.92□□□□□ -1.78
NPL4YBR170C YNL260CP53846 198 aa3.92□□□□□ -1.78
NPL4YBR170C ATC1Q04005 294 aa3.92□□□□□ -1.78
NPL4YBR170C SHS1Q07657 551 aa3.92□□□□□ -1.78
NPL4YBR170C YKL162CP36052 402 aa3.92□□□□□ -1.78
NPL4YBR170C RIB5P38145 238 aa3.92□□□□□ -1.78
NPL4YBR170C IST2P38250 946 aa3.92□□□□□ -1.78
NPL4YBR170C YBR137WP38276 179 aa3.92□□□□□ -1.78
NPL4YBR170C MTC4P38335 694 aaKnown RBP3.92□□□□□ -1.78
NPL4YBR170C LST7P53237 242 aa3.92□□□□□ -1.78
NPL4YBR170C YNL050CP53952 270 aa3.92□□□□□ -1.78
NPL4YBR170C STP1Q00947 519 aa3.92□□□□□ -1.78
NPL4YBR170C GAT3Q07928 141 aa3.92□□□□□ -1.78
NPL4YBR170C SNX3Q08826 162 aaKnown RBP3.92□□□□□ -1.78
NPL4YBR170C TY3A-GQ12173 290 aa3.92□□□□□ -1.78
NPL4YBR170C YPR1Q12458 312 aa3.92□□□□□ -1.78
NPL4YBR170C RRP12Q12754 1228 aaKnown RBP3.92□□□□□ -1.78
NPL4YBR170C TY3A-IQ99219 290 aa3.92□□□□□ -1.78
NPL4YBR170C MTF1P14908 341 aaKnown RBP3.91□□□□□ -1.78
NPL4YBR170C ARF2P19146 181 aaKnown RBP3.91□□□□□ -1.78
NPL4YBR170C DEG1P31115 442 aaKnown RBP3.91□□□□□ -1.78
NPL4YBR170C VMA5P31412 392 aaKnown RBP3.91□□□□□ -1.78
NPL4YBR170C GEP4P38812 185 aa3.91□□□□□ -1.78
NPL4YBR170C PCI8P40512 444 aa3.91□□□□□ -1.78
NPL4YBR170C INA22P40576 216 aa3.91□□□□□ -1.78
NPL4YBR170C RTT101P47050 842 aa3.91□□□□□ -1.78
NPL4YBR170C CAF40P53829 373 aa3.91□□□□□ -1.78
NPL4YBR170C RVB1Q03940 463 aaKnown RBP3.91□□□□□ -1.78
NPL4YBR170C AYT1Q12226 474 aa3.91□□□□□ -1.78
NPL4YBR170C ATR1P13090 542 aa3.9□□□□□ -1.78
NPL4YBR170C RNA14P25298 677 aaKnown RBP3.9□□□□□ -1.78
NPL4YBR170C ATS1P31386 333 aa3.9□□□□□ -1.78
NPL4YBR170C TIR2P33890 251 aa3.9□□□□□ -1.78
NPL4YBR170C ASK1P35734 292 aa3.9□□□□□ -1.78
NPL4YBR170C PMU1P36069 295 aa3.9□□□□□ -1.78
NPL4YBR170C MIX23P38162 196 aa3.9□□□□□ -1.78
NPL4YBR170C ARC40P38328 384 aaKnown RBP3.9□□□□□ -1.78
NPL4YBR170C RCY1P39531 840 aa3.9□□□□□ -1.78
NPL4YBR170C JLP2P40206 208 aa3.9□□□□□ -1.78
NPL4YBR170C SEC27P41811 889 aaKnown RBP3.9□□□□□ -1.78
NPL4YBR170C LSB1P53281 241 aa3.9□□□□□ -1.78
NPL4YBR170C HXT11P54862 567 aa3.9□□□□□ -1.78
NPL4YBR170C FMP42Q04991 504 aa3.9□□□□□ -1.78
NPL4YBR170C YLR281CQ05863 155 aa3.9□□□□□ -1.78
NPL4YBR170C BCP1Q06338 283 aa3.9□□□□□ -1.78
NPL4YBR170C AHC1Q12433 566 aa3.9□□□□□ -1.78
NPL4YBR170C DET1Q99288 334 aaKnown RBP3.9□□□□□ -1.78
NPL4YBR170C RPL20AP0CX23 172 aaKnown RBP3.9□□□□□ -1.79
NPL4YBR170C RPL20BP0CX24 172 aaPredicted RBP3.9□□□□□ -1.79
NPL4YBR170C GPI12P23797 304 aa3.9□□□□□ -1.79
NPL4YBR170C PUT3P25502 979 aaPredicted RBP3.9□□□□□ -1.79
NPL4YBR170C RPL5P26321 297 aaKnown RBP3.9□□□□□ -1.79
NPL4YBR170C SPR1P32603 445 aa3.9□□□□□ -1.79
NPL4YBR170C IML3P38265 245 aa3.9□□□□□ -1.79
NPL4YBR170C YMR262WP38430 313 aa3.9□□□□□ -1.79
NPL4YBR170C YHK8P38776 514 aa3.9□□□□□ -1.79
NPL4YBR170C BFR1P38934 470 aaKnown RBP RIP-Chip data3.9□□□□□ -1.79 RIP-Chip
NPL4YBR170C DSE1P40077 573 aa3.9□□□□□ -1.79
NPL4YBR170C RPR2P40571 144 aa3.9□□□□□ -1.79
NPL4YBR170C OST1P41543 476 aaKnown RBP3.9□□□□□ -1.79
NPL4YBR170C TAF6P53040 516 aa3.9□□□□□ -1.79
NPL4YBR170C HER2Q03557 464 aa3.9□□□□□ -1.79
NPL4YBR170C RTT103Q05543 409 aa3.9□□□□□ -1.79
NPL4YBR170C RSR1P13856 272 aa3.89□□□□□ -1.79
NPL4YBR170C PHA2P32452 334 aa3.89□□□□□ -1.79
NPL4YBR170C RBG1P39729 369 aa3.89□□□□□ -1.79
NPL4YBR170C YND1P40009 630 aa3.89□□□□□ -1.79
NPL4YBR170C FMP33P46998 180 aa3.89□□□□□ -1.79
NPL4YBR170C LIA1P47120 325 aaKnown RBP3.89□□□□□ -1.79
NPL4YBR170C LSC1P53598 329 aaKnown RBP3.89□□□□□ -1.79
NPL4YBR170C UBX2Q04228 584 aa3.89□□□□□ -1.79
NPL4YBR170C ERP1Q05359 219 aaKnown RBP3.89□□□□□ -1.79
NPL4YBR170C ARV1Q06541 321 aa3.89□□□□□ -1.79
NPL4YBR170C RUD3Q12234 484 aaKnown RBP3.89□□□□□ -1.79
NPL4YBR170C RPL24AP04449 155 aaKnown RBP3.88□□□□□ -1.79
NPL4YBR170C RPL15AP05748 204 aaKnown RBP3.88□□□□□ -1.79
NPL4YBR170C SPS22P25380 463 aa3.88□□□□□ -1.79
NPL4YBR170C ICL1P28240 557 aaPredicted RBP3.88□□□□□ -1.79
NPL4YBR170C MKK1P32490 508 aa3.88□□□□□ -1.79
NPL4YBR170C ATO2P32907 282 aa3.88□□□□□ -1.79
NPL4YBR170C YCH1P42937 148 aa3.88□□□□□ -1.79
NPL4YBR170C KEG1P43614 200 aa3.88□□□□□ -1.79
NPL4YBR170C TRM112P53738 135 aaPredicted RBP3.88□□□□□ -1.79
Retrieved 100 of 5,963 RNA–protein pairs in 13.5 ms