RNA–Protein interactions for RNA: YBR028C

YPK3, Transcript of AGC kinase, yeast

Gene YPK3, Length 1,578 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YPK3	YBR028C	GRR1	P24814	1151 aa		3.95	□□□□□ -1.78
YPK3	YBR028C	KRR1	P25586	316 aa	Predicted RBP	3.95	□□□□□ -1.78
YPK3	YBR028C	SNL1	P40548	159 aa		3.95	□□□□□ -1.78
YPK3	YBR028C	EGT2	P42835	1041 aa		3.95	□□□□□ -1.78
YPK3	YBR028C	PRM6	Q04705	352 aa		3.95	□□□□□ -1.78
YPK3	YBR028C	VMA2	P16140	517 aa	Known RBP	3.94	□□□□□ -1.78
YPK3	YBR028C	RAD5	P32849	1169 aa	Predicted RBP	3.94	□□□□□ -1.78
YPK3	YBR028C	MAM33	P40513	266 aa		3.94	□□□□□ -1.78
YPK3	YBR028C	SEC27	P41811	889 aa	Known RBP	3.94	□□□□□ -1.78
YPK3	YBR028C	SHE4	P51534	789 aa		3.94	□□□□□ -1.78
YPK3	YBR028C	YPR091C	Q06833	770 aa		3.94	□□□□□ -1.78
YPK3	YBR028C	PLP2	Q12017	286 aa		3.94	□□□□□ -1.78
YPK3	YBR028C	JID1	Q12350	301 aa		3.94	□□□□□ -1.78
YPK3	YBR028C	YOR338W	Q99326	363 aa		3.94	□□□□□ -1.78
YPK3	YBR028C	FSH3	Q99369	266 aa		3.94	□□□□□ -1.78
YPK3	YBR028C	MAS1	P10507	462 aa		3.93	□□□□□ -1.78
YPK3	YBR028C	RPB5	P20434	215 aa		3.93	□□□□□ -1.78
YPK3	YBR028C	FUN26	P31381	517 aa		3.93	□□□□□ -1.78
YPK3	YBR028C	VAM7	P32912	316 aa		3.93	□□□□□ -1.78
YPK3	YBR028C	ANR2	P36090	516 aa	Predicted RBP	3.93	□□□□□ -1.78
YPK3	YBR028C	MRPL10	P36520	322 aa		3.93	□□□□□ -1.78
YPK3	YBR028C	YIL089W	P40500	205 aa		3.93	□□□□□ -1.78
YPK3	YBR028C	HAC1	P41546	238 aa		3.93	□□□□□ -1.78
YPK3	YBR028C	ADA2	Q02336	434 aa		3.93	□□□□□ -1.78
YPK3	YBR028C	FCY22	Q12119	530 aa		3.93	□□□□□ -1.78
YPK3	YBR028C	MAS2	P11914	482 aa		3.93	□□□□□ -1.78
YPK3	YBR028C	TRX1	P22217	103 aa	Known RBP	3.93	□□□□□ -1.78
YPK3	YBR028C	MRPL8	P22353	238 aa		3.93	□□□□□ -1.78
YPK3	YBR028C	RVS161	P25343	265 aa	Known RBP	3.93	□□□□□ -1.78
YPK3	YBR028C	HXT1	P32465	570 aa		3.93	□□□□□ -1.78
YPK3	YBR028C	YEL045C	P32616	141 aa		3.93	□□□□□ -1.78
YPK3	YBR028C	AIM10	P39965	576 aa	Known RBP	3.93	□□□□□ -1.78
YPK3	YBR028C	ATG18	P43601	500 aa		3.93	□□□□□ -1.78
YPK3	YBR028C	CTK3	P46963	296 aa	Predicted RBP	3.93	□□□□□ -1.78
YPK3	YBR028C	CRH1	P53301	507 aa		3.93	□□□□□ -1.78
YPK3	YBR028C	PRM1	P53835	661 aa		3.93	□□□□□ -1.78
YPK3	YBR028C	YDL114W	Q07530	308 aa		3.93	□□□□□ -1.78
YPK3	YBR028C	MEX67	Q99257	599 aa	Known RBP	3.93	□□□□□ -1.78
YPK3	YBR028C	CHA1	P25379	360 aa	Known RBP	3.92	□□□□□ -1.78
YPK3	YBR028C	EFB1	P32471	206 aa	Known RBP	3.92	□□□□□ -1.78
YPK3	YBR028C	SPO23	P33757	523 aa		3.92	□□□□□ -1.78
YPK3	YBR028C	YHR122W	P38829	231 aa		3.92	□□□□□ -1.78
YPK3	YBR028C	BIR1	P47134	954 aa		3.92	□□□□□ -1.78
YPK3	YBR028C	GIS2	P53849	153 aa	Known RBP RIP-Chip data	3.92	□□□□□ -1.78	not detected
YPK3	YBR028C	YMR310C	Q04867	317 aa	Predicted RBP	3.92	□□□□□ -1.78
YPK3	YBR028C	SHS1	Q07657	551 aa		3.92	□□□□□ -1.78
YPK3	YBR028C	FAR1	P21268	830 aa		3.91	□□□□□ -1.78
YPK3	YBR028C	ZUO1	P32527	433 aa	Known RBP	3.91	□□□□□ -1.78
YPK3	YBR028C	ECM8	P38246	354 aa		3.91	□□□□□ -1.78
YPK3	YBR028C	SEC9	P40357	651 aa		3.91	□□□□□ -1.78
YPK3	YBR028C	YFR057W	P43625	151 aa		3.91	□□□□□ -1.78
YPK3	YBR028C	SMP3	Q04174	516 aa		3.91	□□□□□ -1.78
YPK3	YBR028C	YLH47	Q06493	454 aa		3.91	□□□□□ -1.78
YPK3	YBR028C	CMS1	Q07897	291 aa	Known RBP	3.91	□□□□□ -1.78
YPK3	YBR028C	YDL199C	Q12407	687 aa		3.91	□□□□□ -1.78
YPK3	YBR028C	PCL9	Q12477	304 aa		3.91	□□□□□ -1.78
YPK3	YBR028C	DET1	Q99288	334 aa	Known RBP	3.91	□□□□□ -1.78
YPK3	YBR028C	CKI1	P20485	582 aa		3.9	□□□□□ -1.78
YPK3	YBR028C	HMX1	P32339	317 aa		3.9	□□□□□ -1.78
YPK3	YBR028C	SSE1	P32589	693 aa	Known RBP	3.9	□□□□□ -1.78
YPK3	YBR028C	RTC2	P38279	296 aa		3.9	□□□□□ -1.78
YPK3	YBR028C	BAT1	P38891	393 aa	Known RBP	3.9	□□□□□ -1.78
YPK3	YBR028C	MIG3	P39943	394 aa		3.9	□□□□□ -1.78
YPK3	YBR028C	PRE5	P40302	234 aa	Known RBP	3.9	□□□□□ -1.78
YPK3	YBR028C	ALF1	P53904	254 aa		3.9	□□□□□ -1.78
YPK3	YBR028C	HXT2	P23585	541 aa		3.89	□□□□□ -1.79
YPK3	YBR028C	POP2	P39008	433 aa		3.89	□□□□□ -1.79
YPK3	YBR028C	UTP18	P40362	594 aa	Predicted RBP	3.89	□□□□□ -1.79
YPK3	YBR028C	GAB1	P41733	394 aa		3.89	□□□□□ -1.79
YPK3	YBR028C	KEG1	P43614	200 aa		3.89	□□□□□ -1.79
YPK3	YBR028C	CIN2	P46670	268 aa		3.89	□□□□□ -1.79
YPK3	YBR028C	SHY1	P53266	389 aa		3.89	□□□□□ -1.79
YPK3	YBR028C	RRB1	Q04225	511 aa	Known RBP	3.89	□□□□□ -1.79
YPK3	YBR028C	YHC1	Q05900	231 aa	Known RBP	3.89	□□□□□ -1.79
YPK3	YBR028C	TMC1	Q08422	150 aa	Predicted RBP	3.89	□□□□□ -1.79
YPK3	YBR028C	WTM1	Q12363	437 aa	Known RBP	3.89	□□□□□ -1.79
YPK3	YBR028C	HTZ1	Q12692	134 aa	Known RBP	3.89	□□□□□ -1.79
YPK3	YBR028C	LIN1	P38852	340 aa	Predicted RBP	3.89	□□□□□ -1.79
YPK3	YBR028C	ATG7	P38862	630 aa		3.89	□□□□□ -1.79
YPK3	YBR028C	SDT1	P53078	280 aa		3.89	□□□□□ -1.79
YPK3	YBR028C	CLD1	P53264	445 aa		3.89	□□□□□ -1.79
YPK3	YBR028C	HST1	P53685	503 aa		3.89	□□□□□ -1.79
YPK3	YBR028C	PRO2	P54885	456 aa	Known RBP	3.89	□□□□□ -1.79
YPK3	YBR028C	SPH1	Q06160	661 aa		3.89	□□□□□ -1.79
YPK3	YBR028C	MHR1	Q06630	226 aa		3.89	□□□□□ -1.79
YPK3	YBR028C	REX3	Q12090	404 aa		3.89	□□□□□ -1.79
YPK3	YBR028C	NAG1	Q8TGN9	163 aa		3.89	□□□□□ -1.79
YPK3	YBR028C	REV1	P12689	985 aa		3.88	□□□□□ -1.79
YPK3	YBR028C	SPR1	P32603	445 aa		3.88	□□□□□ -1.79
YPK3	YBR028C	OXA1	P39952	402 aa		3.88	□□□□□ -1.79
YPK3	YBR028C	HEM14	P40012	539 aa		3.88	□□□□□ -1.79
YPK3	YBR028C	YHC3	P47040	408 aa		3.88	□□□□□ -1.79
YPK3	YBR028C	ARR1	Q06596	294 aa		3.88	□□□□□ -1.79
YPK3	YBR028C	MCT1	Q12283	360 aa		3.88	□□□□□ -1.79
YPK3	YBR028C	GLE1	Q12315	538 aa		3.88	□□□□□ -1.79
YPK3	YBR028C	AAT2	P23542	418 aa	Known RBP	3.87	□□□□□ -1.79
YPK3	YBR028C	MXR2	P25566	168 aa		3.87	□□□□□ -1.79
YPK3	YBR028C	NUP2	P32499	720 aa		3.87	□□□□□ -1.79
YPK3	YBR028C	MRPS5	P33759	307 aa		3.87	□□□□□ -1.79
YPK3	YBR028C	ALP1	P38971	573 aa		3.87	□□□□□ -1.79

Retrieved 100 of 5,963 RNA–protein pairs in 5.8 ms