RNA–Protein interactions for RNA: ENST00000640931.1

RTTN-223, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 2,065 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-223ENST00000640931 PLSCR1O15162 318 aa8.66□□□□□ -1.02
RTTN-223ENST00000640931 FOXN1O15353 648 aa8.66□□□□□ -1.02
RTTN-223ENST00000640931 TBCAO75347 108 aaKnown RBP8.66□□□□□ -1.02
RTTN-223ENST00000640931 HSPA8P11142 646 aaKnown RBP8.66□□□□□ -1.02
RTTN-223ENST00000640931 POLE2P56282 527 aa8.66□□□□□ -1.02
RTTN-223ENST00000640931 PLOD1Q02809 727 aaPredicted RBP8.66□□□□□ -1.02
RTTN-223ENST00000640931 ITGA7Q13683 1181 aa8.66□□□□□ -1.02
RTTN-223ENST00000640931 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.66□□□□□ -1.02
RTTN-223ENST00000640931 ANKRD20A8PQ5CZ79 823 aa8.66□□□□□ -1.02
RTTN-223ENST00000640931 KANK3Q6NY19 840 aa8.66□□□□□ -1.02
RTTN-223ENST00000640931 ARMCX5Q6P1M9 558 aa8.66□□□□□ -1.02
RTTN-223ENST00000640931 SHC4Q6S5L8 630 aa8.66□□□□□ -1.02
RTTN-223ENST00000640931 NEK10Q6ZWH5 1172 aa8.66□□□□□ -1.02
RTTN-223ENST00000640931 C2CD5Q86YS7 1000 aa8.66□□□□□ -1.02
RTTN-223ENST00000640931 ZFPM1Q8IX07 1006 aa8.66□□□□□ -1.02
RTTN-223ENST00000640931 SP8Q8IXZ3 490 aa8.66□□□□□ -1.02
RTTN-223ENST00000640931 ARHGAP18Q8N392 663 aa8.66□□□□□ -1.02
RTTN-223ENST00000640931 LRRC45Q96CN5 670 aa8.66□□□□□ -1.02
RTTN-223ENST00000640931 FGD4Q96M96 766 aa8.66□□□□□ -1.02
RTTN-223ENST00000640931 SUCLA2Q9P2R7 463 aaPredicted RBP8.66□□□□□ -1.02
RTTN-223ENST00000640931 DAGLAQ9Y4D2 1042 aa8.66□□□□□ -1.02
RTTN-223ENST00000640931 PCDHB6Q9Y5E3 794 aa8.66□□□□□ -1.02
RTTN-223ENST00000640931 VWA3AA6NCI4 1184 aa8.66□□□□□ -1.02
RTTN-223ENST00000640931 FAM196BA6NMK8 535 aa8.66□□□□□ -1.02
RTTN-223ENST00000640931 MMP1P03956 469 aa8.66□□□□□ -1.02
RTTN-223ENST00000640931 GSTA2P09210 222 aa8.66□□□□□ -1.02
RTTN-223ENST00000640931 LMNB1P20700 586 aa8.66□□□□□ -1.02
RTTN-223ENST00000640931 CCND1P24385 295 aa8.66□□□□□ -1.02
RTTN-223ENST00000640931 ATICP31939 592 aa8.66□□□□□ -1.02
RTTN-223ENST00000640931 STAT6P42226 847 aa8.66□□□□□ -1.02
RTTN-223ENST00000640931 GUCY2FP51841 1108 aa8.66□□□□□ -1.02
RTTN-223ENST00000640931 PRELPP51888 382 aa8.66□□□□□ -1.02
RTTN-223ENST00000640931 EIF6P56537 245 aaKnown RBP8.66□□□□□ -1.02
RTTN-223ENST00000640931 TUBA1BP68363 451 aa8.66□□□□□ -1.02
RTTN-223ENST00000640931 PPIDQ08752 370 aaKnown RBP8.66□□□□□ -1.02
RTTN-223ENST00000640931 ADAM9Q13443 819 aa8.66□□□□□ -1.02
RTTN-223ENST00000640931 BCL2A1Q16548 175 aa8.66□□□□□ -1.02
RTTN-223ENST00000640931 CCDC153Q494R4 210 aa8.66□□□□□ -1.02
RTTN-223ENST00000640931 SLC44A4Q53GD3 710 aa8.66□□□□□ -1.02
RTTN-223ENST00000640931 SPDYCQ5MJ68 293 aa8.66□□□□□ -1.02
RTTN-223ENST00000640931 C15orf52Q6ZUT6 534 aaKnown RBP8.66□□□□□ -1.02
RTTN-223ENST00000640931 USP49Q70CQ1 688 aa8.66□□□□□ -1.02
RTTN-223ENST00000640931 TUBA1AQ71U36 451 aa8.66□□□□□ -1.02
RTTN-223ENST00000640931 FMR1NBQ8N0W7 255 aaPredicted RBP8.66□□□□□ -1.02
RTTN-223ENST00000640931 RASGRP4Q8TDF6 673 aa8.66□□□□□ -1.02
RTTN-223ENST00000640931 TRPC4APQ8TEL6 797 aa8.66□□□□□ -1.02
RTTN-223ENST00000640931 COG1Q8WTW3 980 aa8.66□□□□□ -1.02
RTTN-223ENST00000640931 GPKOWQ92917 476 aaPredicted RBP eCLIP8.66□□□□□ -1.02
RTTN-223ENST00000640931 CDK5RAP3Q96JB5 506 aa8.66□□□□□ -1.02
RTTN-223ENST00000640931 CTAGE1Q96RT6 745 aa8.66□□□□□ -1.02
RTTN-223ENST00000640931 CENPOQ9BU64 300 aa8.66□□□□□ -1.02
RTTN-223ENST00000640931 VCXQ9H320 206 aa8.66□□□□□ -1.02
RTTN-223ENST00000640931 CABP5Q9NP86 173 aa8.66□□□□□ -1.02
RTTN-223ENST00000640931 ATP8A2Q9NTI2 1148 aa8.66□□□□□ -1.02
RTTN-223ENST00000640931 COMMD8Q9NX08 183 aa8.66□□□□□ -1.02
RTTN-223ENST00000640931 RHBDL2Q9NX52 303 aa8.66□□□□□ -1.02
RTTN-223ENST00000640931 IKBKGQ9Y6K9 419 aa8.66□□□□□ -1.02
RTTN-223ENST00000640931 ACTN4O43707 911 aaKnown RBP8.65□□□□□ -1.02
RTTN-223ENST00000640931 ORC4O43929 436 aa8.65□□□□□ -1.02
RTTN-223ENST00000640931 EPB41P11171 864 aaKnown RBP8.65□□□□□ -1.02
RTTN-223ENST00000640931 TOP1P11387 765 aaKnown RBP8.65□□□□□ -1.02
RTTN-223ENST00000640931 ALADP13716 330 aa8.65□□□□□ -1.02
RTTN-223ENST00000640931 PFKFB1P16118 471 aa8.65□□□□□ -1.02
RTTN-223ENST00000640931 RPL17P18621 184 aaKnown RBP8.65□□□□□ -1.02
RTTN-223ENST00000640931 RASA1P20936 1047 aa8.65□□□□□ -1.02
RTTN-223ENST00000640931 FUT4P22083 530 aa8.65□□□□□ -1.02
RTTN-223ENST00000640931 GNG11P61952 73 aa8.65□□□□□ -1.02
RTTN-223ENST00000640931 POU5F1Q01860 360 aaKnown RBP8.65□□□□□ -1.02
RTTN-223ENST00000640931 BYSLQ13895 437 aaKnown RBP8.65□□□□□ -1.02
RTTN-223ENST00000640931 SBK1Q52WX2 424 aa8.65□□□□□ -1.02
RTTN-223ENST00000640931 CCSAPQ6IQ19 270 aaPredicted RBP8.65□□□□□ -1.02
RTTN-223ENST00000640931 DPP8Q6V1X1 898 aaPredicted RBP8.65□□□□□ -1.02
RTTN-223ENST00000640931 C11orf74Q86VG3 221 aa8.65□□□□□ -1.02
RTTN-223ENST00000640931 BPHLQ86WA6 291 aaPredicted RBP8.65□□□□□ -1.02
RTTN-223ENST00000640931 NLGN1Q8N2Q7 840 aa8.65□□□□□ -1.02
RTTN-223ENST00000640931 GDAP1Q8TB36 358 aa8.65□□□□□ -1.02
RTTN-223ENST00000640931 DHX58Q96C10 678 aa8.65□□□□□ -1.02
RTTN-223ENST00000640931 FAM192AQ9GZU8 254 aa8.65□□□□□ -1.02
RTTN-223ENST00000640931 EHD4Q9H223 541 aa8.65□□□□□ -1.02
RTTN-223ENST00000640931 ARPP21Q9UBL0 812 aaPredicted RBP8.65□□□□□ -1.02
RTTN-223ENST00000640931 CDC23Q9UJX2 597 aa8.65□□□□□ -1.02
RTTN-223ENST00000640931 FLT1P17948 1338 aa8.65□□□□□ -1.02
RTTN-223ENST00000640931 SPDYE5A6NIY4 337 aa8.65□□□□□ -1.03
RTTN-223ENST00000640931 DIAPH2O60879 1101 aa8.65□□□□□ -1.03
RTTN-223ENST00000640931 SUPT3HO75486 399 aa8.65□□□□□ -1.03
RTTN-223ENST00000640931 S100A1P23297 94 aa8.65□□□□□ -1.03
RTTN-223ENST00000640931 IL4RP24394 825 aa8.65□□□□□ -1.03
RTTN-223ENST00000640931 GGCXP38435 758 aa8.65□□□□□ -1.03
RTTN-223ENST00000640931 SCTRP47872 440 aa8.65□□□□□ -1.03
RTTN-223ENST00000640931 CDK8P49336 464 aa8.65□□□□□ -1.03
RTTN-223ENST00000640931 AKAP17AQ02040 695 aaKnown RBP8.65□□□□□ -1.03
RTTN-223ENST00000640931 NFIAQ12857 509 aa8.65□□□□□ -1.03
RTTN-223ENST00000640931 TRIM29Q14134 588 aa8.65□□□□□ -1.03
RTTN-223ENST00000640931 SEPT2Q15019 361 aa8.65□□□□□ -1.03
RTTN-223ENST00000640931 SUZ12Q15022 739 aaKnown RBP8.65□□□□□ -1.03
RTTN-223ENST00000640931 R3HDM1Q15032 1099 aaKnown RBP8.65□□□□□ -1.03
RTTN-223ENST00000640931 SLC39A14Q15043 492 aa8.65□□□□□ -1.03
RTTN-223ENST00000640931 NPY5RQ15761 445 aa8.65□□□□□ -1.03
RTTN-223ENST00000640931 STX1AQ16623 288 aa8.65□□□□□ -1.03
RTTN-223ENST00000640931 TYW1BQ6NUM6 668 aa8.65□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms