RNA–Protein interactions for RNA: ENST00000640653.1

VEGFA-232, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-232ENST00000640653 CTDNEP1O95476 244 aa28.46■■■□□ 2.15
VEGFA-232ENST00000640653 NEK4P51957 841 aa28.46■■■□□ 2.15
VEGFA-232ENST00000640653 SKIV2LQ15477 1246 aaKnown RBP28.46■■■□□ 2.15
VEGFA-232ENST00000640653 INF2Q27J81 1249 aa28.46■■■□□ 2.15
VEGFA-232ENST00000640653 KIAA0319LQ8IZA0 1049 aa28.46■■■□□ 2.15
VEGFA-232ENST00000640653 RDM1Q8NG50 284 aa28.46■■■□□ 2.15
VEGFA-232ENST00000640653 MBOAT7Q96N66 472 aa28.46■■■□□ 2.15
VEGFA-232ENST00000640653 UNC45AQ9H3U1 944 aa28.46■■■□□ 2.15
VEGFA-232ENST00000640653 COL4A6Q14031 1691 aa28.45■■■□□ 2.15
VEGFA-232ENST00000640653 PSMD10O75832 226 aa28.45■■■□□ 2.14
VEGFA-232ENST00000640653 C22orf31O95567 290 aa28.45■■■□□ 2.14
VEGFA-232ENST00000640653 ME3Q16798 604 aa28.45■■■□□ 2.14
VEGFA-232ENST00000640653 KRT40Q6A162 431 aa28.45■■■□□ 2.14
VEGFA-232ENST00000640653 NECAB1Q8N987 351 aa28.45■■■□□ 2.14
VEGFA-232ENST00000640653 FBXO22Q8NEZ5 403 aa28.45■■■□□ 2.14
VEGFA-232ENST00000640653 GTF3C6Q969F1 213 aa28.45■■■□□ 2.14
VEGFA-232ENST00000640653 C17orf80Q9BSJ5 609 aa28.45■■■□□ 2.14
VEGFA-232ENST00000640653 NRBP2Q9NSY0 501 aa28.45■■■□□ 2.14
VEGFA-232ENST00000640653 DDX25Q9UHL0 483 aaKnown RBP28.45■■■□□ 2.14
VEGFA-232ENST00000640653 PADI3Q9ULW8 664 aa28.45■■■□□ 2.14
VEGFA-232ENST00000640653 COL4A4P53420 1690 aaPredicted RBP28.45■■■□□ 2.14
VEGFA-232ENST00000640653 MAGEB2O15479 319 aa28.44■■■□□ 2.14
VEGFA-232ENST00000640653 OATP04181 439 aa28.44■■■□□ 2.14
VEGFA-232ENST00000640653 LETM2Q2VYF4 491 aa28.44■■■□□ 2.14
VEGFA-232ENST00000640653 FAM43BQ6ZT52 329 aaPredicted RBP28.44■■■□□ 2.14
VEGFA-232ENST00000640653 MIER3Q7Z3K6 550 aa28.44■■■□□ 2.14
VEGFA-232ENST00000640653 METTL13Q8N6R0 699 aa28.44■■■□□ 2.14
VEGFA-232ENST00000640653 GJA10Q969M2 543 aa28.44■■■□□ 2.14
VEGFA-232ENST00000640653 GINS2Q9Y248 185 aa28.44■■■□□ 2.14
VEGFA-232ENST00000640653 SEC24BO95487 1268 aa28.43■■■□□ 2.14
VEGFA-232ENST00000640653 MRPS5P82675 430 aaKnown RBP28.43■■■□□ 2.14
VEGFA-232ENST00000640653 PRKCEQ02156 737 aa28.43■■■□□ 2.14
VEGFA-232ENST00000640653 ODR4Q5SWX8 454 aa28.43■■■□□ 2.14
VEGFA-232ENST00000640653 NEK8Q86SG6 692 aa28.43■■■□□ 2.14
VEGFA-232ENST00000640653 ETNPPLQ8TBG4 499 aa28.43■■■□□ 2.14
VEGFA-232ENST00000640653 ZNF862O60290 1169 aa28.42■■■□□ 2.14
VEGFA-232ENST00000640653 FIBCD1Q8N539 461 aa28.42■■■□□ 2.14
VEGFA-232ENST00000640653 NAP1L4Q99733 375 aaKnown RBP28.42■■■□□ 2.14
VEGFA-232ENST00000640653 BRMS1Q9HCU9 246 aa28.42■■■□□ 2.14
VEGFA-232ENST00000640653 MYH9P35579 1960 aaKnown RBP28.41■■■□□ 2.14
VEGFA-232ENST00000640653 DTNBO60941 627 aa28.41■■■□□ 2.14
VEGFA-232ENST00000640653 LARGE1O95461 756 aa28.41■■■□□ 2.14
VEGFA-232ENST00000640653 GCFC2P16383 781 aaKnown RBP28.41■■■□□ 2.14
VEGFA-232ENST00000640653 TMOD1P28289 359 aa28.41■■■□□ 2.14
VEGFA-232ENST00000640653 EPC2Q52LR7 807 aa28.41■■■□□ 2.14
VEGFA-232ENST00000640653 LINC01599Q8WXQ3 324 aa28.41■■■□□ 2.14
VEGFA-232ENST00000640653 ASB2Q96Q27 587 aa28.41■■■□□ 2.14
VEGFA-232ENST00000640653 GJB4Q9NTQ9 266 aa28.41■■■□□ 2.14
VEGFA-232ENST00000640653 RPS6KA5O75582 802 aa28.4■■■□□ 2.14
VEGFA-232ENST00000640653 NFX1Q12986 1120 aaKnown RBP28.4■■■□□ 2.14
VEGFA-232ENST00000640653 UGCGQ16739 394 aa28.4■■■□□ 2.14
VEGFA-232ENST00000640653 PPP4R3AQ6IN85 833 aa28.4■■■□□ 2.14
VEGFA-232ENST00000640653 B3GNT9Q6UX72 402 aa28.4■■■□□ 2.14
VEGFA-232ENST00000640653 PIK3AP1Q6ZUJ8 805 aa28.4■■■□□ 2.14
VEGFA-232ENST00000640653 TMEM192Q8IY95 271 aa28.4■■■□□ 2.14
VEGFA-232ENST00000640653 MAP7D2Q96T17 732 aa28.4■■■□□ 2.14
VEGFA-232ENST00000640653 ADGRA3Q8IWK6 1321 aa28.4■■■□□ 2.14
VEGFA-232ENST00000640653 TRANK1O15050 2925 aa28.39■■■□□ 2.14
VEGFA-232ENST00000640653 SLC37A4O43826 429 aa28.39■■■□□ 2.14
VEGFA-232ENST00000640653 FDPSP14324 419 aaKnown RBP28.39■■■□□ 2.14
VEGFA-232ENST00000640653 KRT2P35908 639 aa28.39■■■□□ 2.14
VEGFA-232ENST00000640653 CRYBB1P53674 252 aaPredicted RBP28.39■■■□□ 2.14
VEGFA-232ENST00000640653 KIZQ2M2Z5 673 aa28.39■■■□□ 2.14
VEGFA-232ENST00000640653 TMEM266Q2M3C6 531 aa28.39■■■□□ 2.14
VEGFA-232ENST00000640653 RTN4RL1Q86UN2 441 aaPredicted RBP28.39■■■□□ 2.14
VEGFA-232ENST00000640653 NPAS4Q8IUM7 802 aa28.39■■■□□ 2.14
VEGFA-232ENST00000640653 NSUN7Q8NE18 718 aaKnown RBP28.39■■■□□ 2.14
VEGFA-232ENST00000640653 IL27Q8NEV9 243 aa28.39■■■□□ 2.14
VEGFA-232ENST00000640653 OXER1Q8TDS5 423 aa28.39■■■□□ 2.14
VEGFA-232ENST00000640653 FAM20AQ96MK3 541 aa28.39■■■□□ 2.14
VEGFA-232ENST00000640653 CDHR5Q9HBB8 845 aa28.39■■■□□ 2.14
VEGFA-232ENST00000640653 ERVK-5Q9HDB9 667 aa28.39■■■□□ 2.14
VEGFA-232ENST00000640653 NOC2LQ9Y3T9 749 aaKnown RBP28.39■■■□□ 2.14
VEGFA-232ENST00000640653 RWDD3Q9Y3V2 267 aa28.39■■■□□ 2.14
VEGFA-232ENST00000640653 GPR182O15218 404 aa28.38■■■□□ 2.13
VEGFA-232ENST00000640653 CCNT1O60563 726 aaKnown RBP28.38■■■□□ 2.13
VEGFA-232ENST00000640653 VTNP04004 478 aa28.38■■■□□ 2.13
VEGFA-232ENST00000640653 STAG3L1P0CL83 205 aa28.38■■■□□ 2.13
VEGFA-232ENST00000640653 CLCN3P51790 818 aa28.38■■■□□ 2.13
VEGFA-232ENST00000640653 PTPROQ16827 1216 aa28.38■■■□□ 2.13
VEGFA-232ENST00000640653 AAK1Q2M2I8 961 aa28.38■■■□□ 2.13
VEGFA-232ENST00000640653 EFCAB12Q6NXP0 572 aa28.38■■■□□ 2.13
VEGFA-232ENST00000640653 ZNF710Q8N1W2 664 aa28.38■■■□□ 2.13
VEGFA-232ENST00000640653 PPP1R16BQ96T49 567 aa28.38■■■□□ 2.13
VEGFA-232ENST00000640653 OSMRQ99650 979 aa28.38■■■□□ 2.13
VEGFA-232ENST00000640653 TMX1Q9H3N1 280 aa28.38■■■□□ 2.13
VEGFA-232ENST00000640653 RC3H2Q9HBD1 1191 aaKnown RBP28.38■■■□□ 2.13
VEGFA-232ENST00000640653 COG5Q9UP83 839 aa28.38■■■□□ 2.13
VEGFA-232ENST00000640653 AKT3Q9Y243 479 aa28.38■■■□□ 2.13
VEGFA-232ENST00000640653 DGKIO75912 1065 aa28.37■■■□□ 2.13
VEGFA-232ENST00000640653 BTG3Q14201 252 aaPredicted RBP28.37■■■□□ 2.13
VEGFA-232ENST00000640653 XKR3Q5GH77 459 aa28.37■■■□□ 2.13
VEGFA-232ENST00000640653 TMEM40Q8WWA1 233 aa28.37■■■□□ 2.13
VEGFA-232ENST00000640653 ZNF689Q96CS4 500 aaPredicted RBP28.37■■■□□ 2.13
VEGFA-232ENST00000640653 KCNMB3Q9NPA1 279 aa28.37■■■□□ 2.13
VEGFA-232ENST00000640653 H3BNC9 293 aa28.36■■■□□ 2.13
VEGFA-232ENST00000640653 GPR32O75388 356 aa28.36■■■□□ 2.13
VEGFA-232ENST00000640653 TBC1D8BQ0IIM8 1120 aa28.36■■■□□ 2.13
VEGFA-232ENST00000640653 GPM6BQ13491 265 aa28.36■■■□□ 2.13
VEGFA-232ENST00000640653 LRRC71Q8N4P6 559 aa28.36■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms