RNA–Protein interactions for RNA: ENST00000639715.1

SCARB2-218, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,355 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-218ENST00000639715 HPSEQ9Y251 543 aa6.13□□□□□ -1.43
SCARB2-218ENST00000639715 LGALS16A8MUM7 142 aa6.13□□□□□ -1.43
SCARB2-218ENST00000639715 DNM1LO00429 736 aa6.13□□□□□ -1.43
SCARB2-218ENST00000639715 HNRNPRO43390 633 aaKnown RBP6.13□□□□□ -1.43
SCARB2-218ENST00000639715 ZNF24P17028 368 aa6.13□□□□□ -1.43
SCARB2-218ENST00000639715 BTDP43251 543 aa6.13□□□□□ -1.43
SCARB2-218ENST00000639715 PTPAQ15257 358 aa6.13□□□□□ -1.43
SCARB2-218ENST00000639715 RCN1Q15293 331 aa6.13□□□□□ -1.43
SCARB2-218ENST00000639715 PPP2R5EQ16537 467 aa6.13□□□□□ -1.43
SCARB2-218ENST00000639715 C6orf163Q5TEZ5 329 aa6.13□□□□□ -1.43
SCARB2-218ENST00000639715 RNF220Q5VTB9 566 aa6.13□□□□□ -1.43
SCARB2-218ENST00000639715 PHLDB3Q6NSJ2 640 aa6.13□□□□□ -1.43
SCARB2-218ENST00000639715 OGFOD1Q8N543 542 aa6.13□□□□□ -1.43
SCARB2-218ENST00000639715 MB21D1Q8N884 522 aa6.13□□□□□ -1.43
SCARB2-218ENST00000639715 LARP4BQ92615 738 aaKnown RBP6.13□□□□□ -1.43
SCARB2-218ENST00000639715 CCDC17Q96LX7 622 aa6.13□□□□□ -1.43
SCARB2-218ENST00000639715 PSTPIP2Q9H939 334 aa6.13□□□□□ -1.43
SCARB2-218ENST00000639715 METTL14Q9HCE5 456 aaKnown RBP6.13□□□□□ -1.43
SCARB2-218ENST00000639715 PANK4Q9NVE7 773 aa6.13□□□□□ -1.43
SCARB2-218ENST00000639715 SUCLA2Q9P2R7 463 aaPredicted RBP6.13□□□□□ -1.43
SCARB2-218ENST00000639715 HDAC9Q9UKV0 1011 aa6.13□□□□□ -1.43
SCARB2-218ENST00000639715 PPP1R9AQ9ULJ8 1098 aa6.13□□□□□ -1.43
SCARB2-218ENST00000639715 TMCO1Q9UM00 188 aa6.13□□□□□ -1.43
SCARB2-218ENST00000639715 MINPP1Q9UNW1 487 aa6.13□□□□□ -1.43
SCARB2-218ENST00000639715 BRWD3Q6RI45 1802 aa6.13□□□□□ -1.43
SCARB2-218ENST00000639715 A0A1W2PQC6 194 aa6.13□□□□□ -1.43
SCARB2-218ENST00000639715 IGF2BP3O00425 579 aaKnown RBP eCLIP6.13□□□□□ -1.43
SCARB2-218ENST00000639715 RFC1P35251 1148 aaPredicted RBP6.13□□□□□ -1.43
SCARB2-218ENST00000639715 FKBP3Q00688 224 aaKnown RBP6.13□□□□□ -1.43
SCARB2-218ENST00000639715 DCAF17Q5H9S7 520 aaPredicted RBP6.13□□□□□ -1.43
SCARB2-218ENST00000639715 MIER3Q7Z3K6 550 aa6.13□□□□□ -1.43
SCARB2-218ENST00000639715 ZFAND2BQ8WV99 257 aa6.13□□□□□ -1.43
SCARB2-218ENST00000639715 CASP10Q92851 521 aa6.13□□□□□ -1.43
SCARB2-218ENST00000639715 CHMP6Q96FZ7 201 aa6.13□□□□□ -1.43
SCARB2-218ENST00000639715 ABHD8Q96I13 439 aa6.13□□□□□ -1.43
SCARB2-218ENST00000639715 SH2D4AQ9H788 454 aa6.13□□□□□ -1.43
SCARB2-218ENST00000639715 KCNK9Q9NPC2 374 aa6.13□□□□□ -1.43
SCARB2-218ENST00000639715 INTS9Q9NV88 658 aaKnown RBP6.13□□□□□ -1.43
SCARB2-218ENST00000639715 TUBA8Q9NY65 449 aaPredicted RBP6.13□□□□□ -1.43
SCARB2-218ENST00000639715 KLHL14Q9P2G3 628 aa6.13□□□□□ -1.43
SCARB2-218ENST00000639715 MTRF1LQ9UGC7 380 aaKnown RBP6.13□□□□□ -1.43
SCARB2-218ENST00000639715 ITGB1BP2Q9UKP3 347 aa6.13□□□□□ -1.43
SCARB2-218ENST00000639715 PLAAQ9Y263 795 aa6.13□□□□□ -1.43
SCARB2-218ENST00000639715 MEGF6O75095 1541 aa6.13□□□□□ -1.43
SCARB2-218ENST00000639715 SALL1Q9NSC2 1324 aa6.12□□□□□ -1.43
SCARB2-218ENST00000639715 CYP2D7A0A087X1C5 515 aa6.12□□□□□ -1.43
SCARB2-218ENST00000639715 GSTTP1A0A1W2PQM5 241 aa6.12□□□□□ -1.43
SCARB2-218ENST00000639715 TXNDC9O14530 226 aa6.12□□□□□ -1.43
SCARB2-218ENST00000639715 LDHAP00338 332 aaKnown RBP6.12□□□□□ -1.43
SCARB2-218ENST00000639715 FOSP01100 380 aaPredicted RBP6.12□□□□□ -1.43
SCARB2-218ENST00000639715 NQO1P15559 274 aaKnown RBP6.12□□□□□ -1.43
SCARB2-218ENST00000639715 PDE6CP51160 858 aa6.12□□□□□ -1.43
SCARB2-218ENST00000639715 USP46P62068 366 aa6.12□□□□□ -1.43
SCARB2-218ENST00000639715 LRRC63Q05C16 580 aa6.12□□□□□ -1.43
SCARB2-218ENST00000639715 XRCC4Q13426 336 aa6.12□□□□□ -1.43
SCARB2-218ENST00000639715 INAQ16352 499 aa6.12□□□□□ -1.43
SCARB2-218ENST00000639715 FAM98CQ17RN3 349 aaKnown RBP6.12□□□□□ -1.43
SCARB2-218ENST00000639715 FAM47EQ6ZV65 393 aa6.12□□□□□ -1.43
SCARB2-218ENST00000639715 KLHL7Q8IXQ5 586 aa6.12□□□□□ -1.43
SCARB2-218ENST00000639715 SIX5Q8N196 739 aa6.12□□□□□ -1.43
SCARB2-218ENST00000639715 PHF20Q9BVI0 1012 aa6.12□□□□□ -1.43
SCARB2-218ENST00000639715 DCP1AQ9NPI6 582 aaPredicted RBP6.12□□□□□ -1.43
SCARB2-218ENST00000639715 ABHD10Q9NUJ1 306 aa6.12□□□□□ -1.43
SCARB2-218ENST00000639715 STOML1Q9UBI4 398 aa6.12□□□□□ -1.43
SCARB2-218ENST00000639715 LIMA1Q9UHB6 759 aaKnown RBP6.12□□□□□ -1.43
SCARB2-218ENST00000639715 ZNF180Q9UJW8 692 aa6.12□□□□□ -1.43
SCARB2-218ENST00000639715 MTUS1Q9ULD2 1270 aa6.12□□□□□ -1.43
SCARB2-218ENST00000639715 SH3GLB1Q9Y371 365 aa6.12□□□□□ -1.43
SCARB2-218ENST00000639715 ITIH6Q6UXX5 1313 aa6.12□□□□□ -1.43
SCARB2-218ENST00000639715 ANO9A1A5B4 782 aa6.12□□□□□ -1.43
SCARB2-218ENST00000639715 RIMBP2O15034 1052 aa6.12□□□□□ -1.43
SCARB2-218ENST00000639715 LINGO3P0C6S8 592 aa6.12□□□□□ -1.43
SCARB2-218ENST00000639715 GOLGA8HP0CJ92 632 aa6.12□□□□□ -1.43
SCARB2-218ENST00000639715 EIF4BP23588 611 aaKnown RBP6.12□□□□□ -1.43
SCARB2-218ENST00000639715 NR1I3Q14994 352 aa6.12□□□□□ -1.43
SCARB2-218ENST00000639715 CAPN12Q6ZSI9 719 aa6.12□□□□□ -1.43
SCARB2-218ENST00000639715 ERICH1Q86X53 443 aa6.12□□□□□ -1.43
SCARB2-218ENST00000639715 NME8Q8N427 588 aa6.12□□□□□ -1.43
SCARB2-218ENST00000639715 TC2NQ8N9U0 490 aa6.12□□□□□ -1.43
SCARB2-218ENST00000639715 RAB3IL1Q8TBN0 382 aa6.12□□□□□ -1.43
SCARB2-218ENST00000639715 CCDC110Q8TBZ0 833 aa6.12□□□□□ -1.43
SCARB2-218ENST00000639715 LRRC8CQ8TDW0 803 aa6.12□□□□□ -1.43
SCARB2-218ENST00000639715 TAF1DQ9H5J8 278 aaPredicted RBP6.12□□□□□ -1.43
SCARB2-218ENST00000639715 RABL2AQ9UBK7 228 aaPredicted RBP6.12□□□□□ -1.43
SCARB2-218ENST00000639715 ARMCX3Q9UH62 379 aaPredicted RBP6.12□□□□□ -1.43
SCARB2-218ENST00000639715 GGA2Q9UJY4 613 aa6.12□□□□□ -1.43
SCARB2-218ENST00000639715 FBXO9Q9UK97 447 aaPredicted RBP6.12□□□□□ -1.43
SCARB2-218ENST00000639715 SLC4A7Q9Y6M7 1214 aa6.12□□□□□ -1.43
SCARB2-218ENST00000639715 SPDYE5A6NIY4 337 aa6.12□□□□□ -1.43
SCARB2-218ENST00000639715 ACTN4O43707 911 aaKnown RBP6.12□□□□□ -1.43
SCARB2-218ENST00000639715 MGRN1O60291 552 aa6.12□□□□□ -1.43
SCARB2-218ENST00000639715 BBOX1O75936 387 aa6.12□□□□□ -1.43
SCARB2-218ENST00000639715 HEXIM1O94992 359 aaKnown RBP6.12□□□□□ -1.43
SCARB2-218ENST00000639715 TNFAIP3P21580 790 aa6.12□□□□□ -1.43
SCARB2-218ENST00000639715 KCNA4P22459 653 aa6.12□□□□□ -1.43
SCARB2-218ENST00000639715 GUCY1A2P33402 732 aa6.12□□□□□ -1.43
SCARB2-218ENST00000639715 MSH2P43246 934 aa6.12□□□□□ -1.43
SCARB2-218ENST00000639715 CLCN2P51788 898 aa6.12□□□□□ -1.43
SCARB2-218ENST00000639715 PPP2R2AP63151 447 aa6.12□□□□□ -1.43
SCARB2-218ENST00000639715 MTMR3Q13615 1198 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms