RNA–Protein interactions for RNA: ENST00000637223.1

CLN6-218, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 652 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-218ENST00000637223 FAM109BQ6ICB4 259 aaPredicted RBP19.25■□□□□ 0.67
CLN6-218ENST00000637223 RUFY4Q6ZNE9 571 aa19.25■□□□□ 0.67
CLN6-218ENST00000637223 ANO5Q75V66 913 aa19.25■□□□□ 0.67
CLN6-218ENST00000637223 C4orf19Q8IY42 314 aa19.25■□□□□ 0.67
CLN6-218ENST00000637223 LINC00301Q8NCQ3 95 aa19.25■□□□□ 0.67
CLN6-218ENST00000637223 DHX38Q92620 1227 aaKnown RBP19.25■□□□□ 0.67
CLN6-218ENST00000637223 WNT8BQ93098 351 aa19.25■□□□□ 0.67
CLN6-218ENST00000637223 POLR3CQ9BUI4 534 aaPredicted RBP19.25■□□□□ 0.67
CLN6-218ENST00000637223 TUFT1Q9NNX1 390 aa19.25■□□□□ 0.67
CLN6-218ENST00000637223 FBXO2Q9UK22 296 aaPredicted RBP19.25■□□□□ 0.67
CLN6-218ENST00000637223 COL1A2P08123 1366 aa19.24■□□□□ 0.67
CLN6-218ENST00000637223 ZBTB39O15060 712 aa19.24■□□□□ 0.67
CLN6-218ENST00000637223 NCLP19338 710 aaKnown RBP19.24■□□□□ 0.67
CLN6-218ENST00000637223 ITGB8P26012 769 aa19.24■□□□□ 0.67
CLN6-218ENST00000637223 RPA1P27694 616 aa19.24■□□□□ 0.67
CLN6-218ENST00000637223 YWHABP31946 246 aaKnown RBP19.24■□□□□ 0.67
CLN6-218ENST00000637223 PTK7Q13308 1070 aa19.24■□□□□ 0.67
CLN6-218ENST00000637223 KRT79Q5XKE5 535 aa19.24■□□□□ 0.67
CLN6-218ENST00000637223 POTEGQ6S5H5 508 aa19.24■□□□□ 0.67
CLN6-218ENST00000637223 SERINC5Q86VE9 423 aa19.24■□□□□ 0.67
CLN6-218ENST00000637223 CLIC6Q96NY7 704 aa19.24■□□□□ 0.67
CLN6-218ENST00000637223 NOC4LQ9BVI4 516 aaKnown RBP19.24■□□□□ 0.67
CLN6-218ENST00000637223 HIPK3Q9H422 1215 aa19.24■□□□□ 0.67
CLN6-218ENST00000637223 PRDM6Q9NQX0 595 aa19.24■□□□□ 0.67
CLN6-218ENST00000637223 SRPRBQ9Y5M8 271 aaKnown RBP19.24■□□□□ 0.67
CLN6-218ENST00000637223 UMODL1Q5DID0 1318 aa19.24■□□□□ 0.67
CLN6-218ENST00000637223 MBLAC1A4D2B0 266 aaPredicted RBP19.23■□□□□ 0.67
CLN6-218ENST00000637223 SPTLC2O15270 562 aa19.23■□□□□ 0.67
CLN6-218ENST00000637223 LYPLA2O95372 231 aa19.23■□□□□ 0.67
CLN6-218ENST00000637223 YEATS4O95619 227 aa19.23■□□□□ 0.67
CLN6-218ENST00000637223 RAG1P15918 1043 aa19.23■□□□□ 0.67
CLN6-218ENST00000637223 KLRC1P26715 233 aa19.23■□□□□ 0.67
CLN6-218ENST00000637223 CYP2C18P33260 490 aa19.23■□□□□ 0.67
CLN6-218ENST00000637223 LONP1P36776 959 aaKnown RBP19.23■□□□□ 0.67
CLN6-218ENST00000637223 NPEPPSP55786 919 aa19.23■□□□□ 0.67
CLN6-218ENST00000637223 ZRSR1Q15695 479 aaKnown RBP19.23■□□□□ 0.67
CLN6-218ENST00000637223 ECM1Q16610 540 aa19.23■□□□□ 0.67
CLN6-218ENST00000637223 ATL3Q6DD88 541 aa19.23■□□□□ 0.67
CLN6-218ENST00000637223 MTHFD1LQ6UB35 978 aa19.23■□□□□ 0.67
CLN6-218ENST00000637223 ZNF579Q8NAF0 562 aaKnown RBP19.23■□□□□ 0.67
CLN6-218ENST00000637223 PIGOQ8TEQ8 1089 aa19.23■□□□□ 0.67
CLN6-218ENST00000637223 MMTAG2Q9BU76 263 aaKnown RBP19.23■□□□□ 0.67
CLN6-218ENST00000637223 NIFKQ9BYG3 293 aaKnown RBP19.23■□□□□ 0.67
CLN6-218ENST00000637223 CSRNP2Q9H175 543 aa19.23■□□□□ 0.67
CLN6-218ENST00000637223 CFAP45Q9UL16 551 aa19.23■□□□□ 0.67
CLN6-218ENST00000637223 ATP6V1DQ9Y5K8 247 aa19.23■□□□□ 0.67
CLN6-218ENST00000637223 STK24Q9Y6E0 443 aa19.23■□□□□ 0.67
CLN6-218ENST00000637223 DNAH12Q6ZR08 3092 aa19.23■□□□□ 0.67
CLN6-218ENST00000637223 C22orf31O95567 290 aa19.22■□□□□ 0.67
CLN6-218ENST00000637223 TARBP2Q15633 366 aaKnown RBP19.22■□□□□ 0.67
CLN6-218ENST00000637223 TRIM71Q2Q1W2 868 aaKnown RBP19.22■□□□□ 0.67
CLN6-218ENST00000637223 XKR9Q5GH70 373 aa19.22■□□□□ 0.67
CLN6-218ENST00000637223 SPECC1Q5M775 1068 aa19.22■□□□□ 0.67
CLN6-218ENST00000637223 OTUD6AQ7L8S5 288 aa19.22■□□□□ 0.67
CLN6-218ENST00000637223 KRI1Q8N9T8 703 aaKnown RBP19.22■□□□□ 0.67
CLN6-218ENST00000637223 CEP170P1Q96L14 293 aa19.22■□□□□ 0.67
CLN6-218ENST00000637223 AK8Q96MA6 479 aa19.22■□□□□ 0.67
CLN6-218ENST00000637223 FAM49AQ9H0Q0 323 aaPredicted RBP19.22■□□□□ 0.67
CLN6-218ENST00000637223 CIZ1Q9ULV3 898 aaPredicted RBP19.22■□□□□ 0.67
CLN6-218ENST00000637223 MORC2Q9Y6X9 1032 aaPredicted RBP19.22■□□□□ 0.67
CLN6-218ENST00000637223 TIMP1P01033 207 aa19.21■□□□□ 0.67
CLN6-218ENST00000637223 THPOP40225 353 aa19.21■□□□□ 0.67
CLN6-218ENST00000637223 CCL23P55773 120 aa19.21■□□□□ 0.67
CLN6-218ENST00000637223 KRT85P78386 507 aa19.21■□□□□ 0.67
CLN6-218ENST00000637223 TBC1D8BQ0IIM8 1120 aa19.21■□□□□ 0.67
CLN6-218ENST00000637223 BFSP2Q13515 415 aa19.21■□□□□ 0.67
CLN6-218ENST00000637223 TAF2Q6P1X5 1199 aa19.21■□□□□ 0.67
CLN6-218ENST00000637223 CABP7Q86V35 215 aa19.21■□□□□ 0.67
CLN6-218ENST00000637223 CCDC155Q8N6L0 562 aa19.21■□□□□ 0.67
CLN6-218ENST00000637223 CAGE1Q8TC20 777 aa19.21■□□□□ 0.67
CLN6-218ENST00000637223 CCDC43Q96MW1 224 aaKnown RBP19.21■□□□□ 0.67
CLN6-218ENST00000637223 CYP26B1Q9NR63 512 aa19.21■□□□□ 0.67
CLN6-218ENST00000637223 DDX19AQ9NUU7 478 aaKnown RBP19.21■□□□□ 0.67
CLN6-218ENST00000637223 KIAA1024Q9UPX6 916 aa19.21■□□□□ 0.67
CLN6-218ENST00000637223 PCDHA2Q9Y5H9 948 aa19.21■□□□□ 0.67
CLN6-218ENST00000637223 PPP6R2O75170 966 aa19.2■□□□□ 0.66
CLN6-218ENST00000637223 CTSHP09668 335 aa19.2■□□□□ 0.66
CLN6-218ENST00000637223 CKBP12277 381 aa19.2■□□□□ 0.66
CLN6-218ENST00000637223 UBA7P41226 1012 aa19.2■□□□□ 0.66
CLN6-218ENST00000637223 USP49Q70CQ1 688 aa19.2■□□□□ 0.66
CLN6-218ENST00000637223 LRRC71Q8N4P6 559 aa19.2■□□□□ 0.66
CLN6-218ENST00000637223 METTL13Q8N6R0 699 aa19.2■□□□□ 0.66
CLN6-218ENST00000637223 RETREG2Q8NC44 543 aa19.2■□□□□ 0.66
CLN6-218ENST00000637223 KCNG4Q8TDN1 519 aa19.2■□□□□ 0.66
CLN6-218ENST00000637223 DNAJB3Q8WWF6 145 aa19.2■□□□□ 0.66
CLN6-218ENST00000637223 BADQ92934 168 aa19.2■□□□□ 0.66
CLN6-218ENST00000637223 PNMA5Q96PV4 448 aa19.2■□□□□ 0.66
CLN6-218ENST00000637223 NACC1Q96RE7 527 aa19.2■□□□□ 0.66
CLN6-218ENST00000637223 CEP89Q96ST8 783 aa19.2■□□□□ 0.66
CLN6-218ENST00000637223 PLIN2Q99541 437 aa19.2■□□□□ 0.66
CLN6-218ENST00000637223 WNT8AQ9H1J5 351 aa19.2■□□□□ 0.66
CLN6-218ENST00000637223 BMP2KQ9NSY1 1161 aaPredicted RBP19.2■□□□□ 0.66
CLN6-218ENST00000637223 ANKEF1Q9NU02 776 aa19.2■□□□□ 0.66
CLN6-218ENST00000637223 MAGEB2O15479 319 aa19.19■□□□□ 0.66
CLN6-218ENST00000637223 MUTP22033 750 aa19.19■□□□□ 0.66
CLN6-218ENST00000637223 CLCN3P51790 818 aa19.19■□□□□ 0.66
CLN6-218ENST00000637223 ZNF618Q5T7W0 954 aa19.19■□□□□ 0.66
CLN6-218ENST00000637223 ZNF697Q5TEC3 545 aa19.19■□□□□ 0.66
CLN6-218ENST00000637223 SCLYQ96I15 445 aa19.19■□□□□ 0.66
CLN6-218ENST00000637223 EPSTI1Q96J88 318 aa19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms