RNA–Protein interactions for RNA: ENST00000635675.2

LINC00339-210, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,404 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-210ENST00000635675 TDHQ8IZJ6 230 aa10.92□□□□□ -0.66
LINC00339-210ENST00000635675 IGSF22Q8N9C0 903 aa10.92□□□□□ -0.66
LINC00339-210ENST00000635675 DNAJB3Q8WWF6 145 aa10.92□□□□□ -0.66
LINC00339-210ENST00000635675 CEP89Q96ST8 783 aa10.92□□□□□ -0.66
LINC00339-210ENST00000635675 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.92□□□□□ -0.66
LINC00339-210ENST00000635675 LXNQ9BS40 222 aa10.92□□□□□ -0.66
LINC00339-210ENST00000635675 ZSCAN16Q9H4T2 348 aaPredicted RBP10.92□□□□□ -0.66
LINC00339-210ENST00000635675 ZSWIM4Q9H7M6 989 aa10.92□□□□□ -0.66
LINC00339-210ENST00000635675 TANC1Q9C0D5 1861 aa10.92□□□□□ -0.66
LINC00339-210ENST00000635675 TET1Q8NFU7 2136 aa10.91□□□□□ -0.66
LINC00339-210ENST00000635675 ZBTB39O15060 712 aa10.91□□□□□ -0.66
LINC00339-210ENST00000635675 MAGEB2O15479 319 aa10.91□□□□□ -0.66
LINC00339-210ENST00000635675 NBNO60934 754 aa10.91□□□□□ -0.66
LINC00339-210ENST00000635675 CHRNA1P02708 482 aa10.91□□□□□ -0.66
LINC00339-210ENST00000635675 CXCL10P02778 98 aa10.91□□□□□ -0.66
LINC00339-210ENST00000635675 RPLP2P05387 115 aaKnown RBP10.91□□□□□ -0.66
LINC00339-210ENST00000635675 CYP4A11Q02928 519 aa10.91□□□□□ -0.66
LINC00339-210ENST00000635675 TMEM266Q2M3C6 531 aa10.91□□□□□ -0.66
LINC00339-210ENST00000635675 ARL6IP4Q66PJ3 421 aaKnown RBP10.91□□□□□ -0.66
LINC00339-210ENST00000635675 FAM173BQ6P4H8 233 aa10.91□□□□□ -0.66
LINC00339-210ENST00000635675 ZNF365Q70YC5 407 aa10.91□□□□□ -0.66
LINC00339-210ENST00000635675 DEFB128Q7Z7B8 93 aa10.91□□□□□ -0.66
LINC00339-210ENST00000635675 RSPH3Q86UC2 560 aa10.91□□□□□ -0.66
LINC00339-210ENST00000635675 CATSPER3Q86XQ3 398 aa10.91□□□□□ -0.66
LINC00339-210ENST00000635675 TPH2Q8IWU9 490 aa10.91□□□□□ -0.66
LINC00339-210ENST00000635675 NME8Q8N427 588 aa10.91□□□□□ -0.66
LINC00339-210ENST00000635675 LINC01465Q8N7H1 131 aa10.91□□□□□ -0.66
LINC00339-210ENST00000635675 NEK9Q8TD19 979 aa10.91□□□□□ -0.66
LINC00339-210ENST00000635675 IPO9Q96P70 1041 aaKnown RBP10.91□□□□□ -0.66
LINC00339-210ENST00000635675 POLR3CQ9BUI4 534 aaPredicted RBP10.91□□□□□ -0.66
LINC00339-210ENST00000635675 FAM49AQ9H0Q0 323 aaPredicted RBP10.91□□□□□ -0.66
LINC00339-210ENST00000635675 DAXXQ9UER7 740 aaPredicted RBP10.91□□□□□ -0.66
LINC00339-210ENST00000635675 SEPT9Q9UHD8 586 aaPredicted RBP10.91□□□□□ -0.66
LINC00339-210ENST00000635675 EVPLQ92817 2033 aa10.91□□□□□ -0.66
LINC00339-210ENST00000635675 MED24O75448 989 aa10.9□□□□□ -0.66
LINC00339-210ENST00000635675 FGBP02675 491 aa10.9□□□□□ -0.66
LINC00339-210ENST00000635675 PFKMP08237 780 aa10.9□□□□□ -0.66
LINC00339-210ENST00000635675 CTSHP09668 335 aa10.9□□□□□ -0.66
LINC00339-210ENST00000635675 YWHABP31946 246 aaKnown RBP10.9□□□□□ -0.66
LINC00339-210ENST00000635675 MRPS6P82932 125 aaKnown RBP10.9□□□□□ -0.66
LINC00339-210ENST00000635675 MGAT3Q09327 533 aa10.9□□□□□ -0.66
LINC00339-210ENST00000635675 BECN1Q14457 450 aa10.9□□□□□ -0.66
LINC00339-210ENST00000635675 SF3A1Q15459 793 aaKnown RBP10.9□□□□□ -0.66
LINC00339-210ENST00000635675 MTERF2Q49AM1 385 aa10.9□□□□□ -0.66
LINC00339-210ENST00000635675 HABP4Q5JVS0 413 aaKnown RBP10.9□□□□□ -0.66
LINC00339-210ENST00000635675 RASIP1Q5U651 963 aa10.9□□□□□ -0.66
LINC00339-210ENST00000635675 PSRC1Q6PGN9 363 aaPredicted RBP10.9□□□□□ -0.66
LINC00339-210ENST00000635675 DTHD1Q6ZMT9 781 aa10.9□□□□□ -0.66
LINC00339-210ENST00000635675 ZNF579Q8NAF0 562 aaKnown RBP10.9□□□□□ -0.66
LINC00339-210ENST00000635675 SH2D3AQ9BRG2 576 aa10.9□□□□□ -0.66
LINC00339-210ENST00000635675 OSBPL7Q9BZF2 842 aa10.9□□□□□ -0.66
LINC00339-210ENST00000635675 TUFT1Q9NNX1 390 aa10.9□□□□□ -0.66
LINC00339-210ENST00000635675 CYP26B1Q9NR63 512 aa10.9□□□□□ -0.66
LINC00339-210ENST00000635675 LRWD1Q9UFC0 647 aa10.9□□□□□ -0.66
LINC00339-210ENST00000635675 IGKV6-21A0A0C4DH24 114 aa10.89□□□□□ -0.67
LINC00339-210ENST00000635675 RBAK-RBAKDNI3L0D1 243 aa10.89□□□□□ -0.67
LINC00339-210ENST00000635675 MAFO75444 373 aaPredicted RBP10.89□□□□□ -0.67
LINC00339-210ENST00000635675 BMP15O95972 392 aa10.89□□□□□ -0.67
LINC00339-210ENST00000635675 ZSCAN22P10073 491 aaPredicted RBP10.89□□□□□ -0.67
LINC00339-210ENST00000635675 XRCC6P12956 609 aaKnown RBP eCLIP10.89□□□□□ -0.67
LINC00339-210ENST00000635675 KCNA4P22459 653 aa10.89□□□□□ -0.67
LINC00339-210ENST00000635675 RPA1P27694 616 aa10.89□□□□□ -0.67
LINC00339-210ENST00000635675 NPEPPSP55786 919 aa10.89□□□□□ -0.67
LINC00339-210ENST00000635675 C1QBPQ07021 282 aaKnown RBP10.89□□□□□ -0.67
LINC00339-210ENST00000635675 TBC1D8BQ0IIM8 1120 aa10.89□□□□□ -0.67
LINC00339-210ENST00000635675 MKRN4PQ13434 485 aaPredicted RBP10.89□□□□□ -0.67
LINC00339-210ENST00000635675 PKP1Q13835 747 aa10.89□□□□□ -0.67
LINC00339-210ENST00000635675 PTPAQ15257 358 aa10.89□□□□□ -0.67
LINC00339-210ENST00000635675 IER5Q5VY09 327 aa10.89□□□□□ -0.67
LINC00339-210ENST00000635675 PLA2G4FQ68DD2 849 aa10.89□□□□□ -0.67
LINC00339-210ENST00000635675 EFCAB12Q6NXP0 572 aa10.89□□□□□ -0.67
LINC00339-210ENST00000635675 OTUD6AQ7L8S5 288 aa10.89□□□□□ -0.67
LINC00339-210ENST00000635675 METTL13Q8N6R0 699 aa10.89□□□□□ -0.67
LINC00339-210ENST00000635675 ERMNQ8TAM6 284 aa10.89□□□□□ -0.67
LINC00339-210ENST00000635675 HERVK_113Q902F9 699 aa10.89□□□□□ -0.67
LINC00339-210ENST00000635675 RAB34Q9BZG1 259 aa10.89□□□□□ -0.67
LINC00339-210ENST00000635675 ANKEF1Q9NU02 776 aa10.89□□□□□ -0.67
LINC00339-210ENST00000635675 PPME1Q9Y570 386 aa10.89□□□□□ -0.67
LINC00339-210ENST00000635675 CLIC4Q9Y696 253 aa10.89□□□□□ -0.67
LINC00339-210ENST00000635675 CDY2AQ9Y6F7 541 aa10.89□□□□□ -0.67
LINC00339-210ENST00000635675 KDM3AQ9Y4C1 1321 aa10.88□□□□□ -0.67
LINC00339-210ENST00000635675 PP2D1A8MPX8 630 aa10.88□□□□□ -0.67
LINC00339-210ENST00000635675 MUTP22033 750 aa10.88□□□□□ -0.67
LINC00339-210ENST00000635675 CLCN3P51790 818 aa10.88□□□□□ -0.67
LINC00339-210ENST00000635675 TMEM62Q0P6H9 643 aa10.88□□□□□ -0.67
LINC00339-210ENST00000635675 ECM1Q16610 540 aa10.88□□□□□ -0.67
LINC00339-210ENST00000635675 TCTN1Q2MV58 587 aa10.88□□□□□ -0.67
LINC00339-210ENST00000635675 LRIT3Q3SXY7 679 aa10.88□□□□□ -0.67
LINC00339-210ENST00000635675 PLEKHG4Q58EX7 1191 aa10.88□□□□□ -0.67
LINC00339-210ENST00000635675 OTOP2Q7RTS6 562 aa10.88□□□□□ -0.67
LINC00339-210ENST00000635675 PIGOQ8TEQ8 1089 aa10.88□□□□□ -0.67
LINC00339-210ENST00000635675 CEP170P1Q96L14 293 aa10.88□□□□□ -0.67
LINC00339-210ENST00000635675 RNPC3Q96LT9 517 aaKnown RBP10.88□□□□□ -0.67
LINC00339-210ENST00000635675 MMTAG2Q9BU76 263 aaKnown RBP10.88□□□□□ -0.67
LINC00339-210ENST00000635675 CELF4Q9BZC1 486 aaKnown RBP10.88□□□□□ -0.67
LINC00339-210ENST00000635675 FTOQ9C0B1 505 aaKnown RBP eCLIP10.88□□□□□ -0.67
LINC00339-210ENST00000635675 SUGCTQ9HAC7 445 aa10.88□□□□□ -0.67
LINC00339-210ENST00000635675 CXXC1Q9P0U4 656 aaPredicted RBP10.88□□□□□ -0.67
LINC00339-210ENST00000635675 TRPV2Q9Y5S1 764 aa10.88□□□□□ -0.67
LINC00339-210ENST00000635675 STK24Q9Y6E0 443 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms