RNA–Protein interactions for RNA: ENST00000627685.2

TCF4-260, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-260ENST00000627685 PRDM5Q9NQX1 630 aaPredicted RBP8.78□□□□□ -1
TCF4-260ENST00000627685 TRMT13Q9NUP7 481 aaKnown RBP8.78□□□□□ -1
TCF4-260ENST00000627685 TMEM39AQ9NV64 488 aa8.78□□□□□ -1
TCF4-260ENST00000627685 RBM28Q9NW13 759 aaKnown RBP8.78□□□□□ -1
TCF4-260ENST00000627685 TMEM260Q9NX78 707 aa8.78□□□□□ -1
TCF4-260ENST00000627685 CDH23Q9H251 3354 aa8.78□□□□□ -1
TCF4-260ENST00000627685 SIP14410 1827 aa8.77□□□□□ -1
TCF4-260ENST00000627685 TLR3O15455 904 aaKnown RBP8.77□□□□□ -1.01
TCF4-260ENST00000627685 KPNA6O60684 536 aa8.77□□□□□ -1.01
TCF4-260ENST00000627685 GGPS1O95749 300 aa8.77□□□□□ -1.01
TCF4-260ENST00000627685 GH1P01241 217 aa8.77□□□□□ -1.01
TCF4-260ENST00000627685 HMGB1P09429 215 aaKnown RBP8.77□□□□□ -1.01
TCF4-260ENST00000627685 SKIP12755 728 aa8.77□□□□□ -1.01
TCF4-260ENST00000627685 RAG1P15918 1043 aa8.77□□□□□ -1.01
TCF4-260ENST00000627685 IFNAR1P17181 557 aa8.77□□□□□ -1.01
TCF4-260ENST00000627685 CYP2C18P33260 490 aa8.77□□□□□ -1.01
TCF4-260ENST00000627685 SREBF1P36956 1147 aa8.77□□□□□ -1.01
TCF4-260ENST00000627685 CPT1AP50416 773 aa8.77□□□□□ -1.01
TCF4-260ENST00000627685 MBTPS1Q14703 1052 aa8.77□□□□□ -1.01
TCF4-260ENST00000627685 BRDTQ58F21 947 aaPredicted RBP8.77□□□□□ -1.01
TCF4-260ENST00000627685 GDF6Q6KF10 455 aaPredicted RBP8.77□□□□□ -1.01
TCF4-260ENST00000627685 MFSD5Q6N075 450 aa8.77□□□□□ -1.01
TCF4-260ENST00000627685 TRIM50Q86XT4 487 aa8.77□□□□□ -1.01
TCF4-260ENST00000627685 PPTC7Q8NI37 304 aa8.77□□□□□ -1.01
TCF4-260ENST00000627685 AIFM3Q96NN9 605 aa8.77□□□□□ -1.01
TCF4-260ENST00000627685 PCYT2Q99447 389 aa8.77□□□□□ -1.01
TCF4-260ENST00000627685 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.77□□□□□ -1.01
TCF4-260ENST00000627685 MTG1Q9BT17 334 aaPredicted RBP8.77□□□□□ -1.01
TCF4-260ENST00000627685 ZMYND12Q9H0C1 365 aa8.77□□□□□ -1.01
TCF4-260ENST00000627685 TPCN1Q9ULQ1 816 aa8.77□□□□□ -1.01
TCF4-260ENST00000627685 MRVI1Q9Y6F6 885 aa8.77□□□□□ -1.01
TCF4-260ENST00000627685 PTPRSQ13332 1948 aa8.76□□□□□ -1.01
TCF4-260ENST00000627685 A0A0C4DFX4 3053 aa8.76□□□□□ -1.01
TCF4-260ENST00000627685 FAM86B1E9PN63 330 aa8.76□□□□□ -1.01
TCF4-260ENST00000627685 PRPF3O43395 683 aaKnown RBP8.76□□□□□ -1.01
TCF4-260ENST00000627685 FIBPO43427 364 aa8.76□□□□□ -1.01
TCF4-260ENST00000627685 SORBS3O60504 671 aa8.76□□□□□ -1.01
TCF4-260ENST00000627685 STAU1O95793 577 aaKnown RBP8.76□□□□□ -1.01
TCF4-260ENST00000627685 IL2RAP01589 272 aa8.76□□□□□ -1.01
TCF4-260ENST00000627685 FAM86B2P0C5J1 330 aa8.76□□□□□ -1.01
TCF4-260ENST00000627685 CYP2C9P11712 490 aa8.76□□□□□ -1.01
TCF4-260ENST00000627685 MYCLP12524 364 aaPredicted RBP8.76□□□□□ -1.01
TCF4-260ENST00000627685 SCG2P13521 617 aa8.76□□□□□ -1.01
TCF4-260ENST00000627685 CSF2RAP15509 400 aa8.76□□□□□ -1.01
TCF4-260ENST00000627685 CCND2P30279 289 aa8.76□□□□□ -1.01
TCF4-260ENST00000627685 METAP2P50579 478 aaKnown RBP eCLIP8.76□□□□□ -1.01
TCF4-260ENST00000627685 SMAD3P84022 425 aaKnown RBP8.76□□□□□ -1.01
TCF4-260ENST00000627685 FPGSQ05932 587 aa8.76□□□□□ -1.01
TCF4-260ENST00000627685 SCRN1Q12765 414 aa8.76□□□□□ -1.01
TCF4-260ENST00000627685 POU4F2Q12837 409 aa8.76□□□□□ -1.01
TCF4-260ENST00000627685 ITGB3BPQ13352 177 aaPredicted RBP8.76□□□□□ -1.01
TCF4-260ENST00000627685 TMEM240Q5SV17 173 aa8.76□□□□□ -1.01
TCF4-260ENST00000627685 NFRKBQ6P4R8 1299 aa8.76□□□□□ -1.01
TCF4-260ENST00000627685 HEATR3Q7Z4Q2 680 aa8.76□□□□□ -1.01
TCF4-260ENST00000627685 VTI1AQ96AJ9 217 aa8.76□□□□□ -1.01
TCF4-260ENST00000627685 GPR20Q99678 358 aa8.76□□□□□ -1.01
TCF4-260ENST00000627685 RNF26Q9BY78 433 aaPredicted RBP8.76□□□□□ -1.01
TCF4-260ENST00000627685 GRIP2Q9C0E4 1043 aa8.76□□□□□ -1.01
TCF4-260ENST00000627685 GJB4Q9NTQ9 266 aa8.76□□□□□ -1.01
TCF4-260ENST00000627685 CXXC1Q9P0U4 656 aaPredicted RBP8.76□□□□□ -1.01
TCF4-260ENST00000627685 GTF2IRD1Q9UHL9 959 aa8.76□□□□□ -1.01
TCF4-260ENST00000627685 PCDHA6Q9UN73 950 aa8.76□□□□□ -1.01
TCF4-260ENST00000627685 PCDHA8Q9Y5H6 950 aa8.76□□□□□ -1.01
TCF4-260ENST00000627685 DOCK5Q9H7D0 1870 aa8.76□□□□□ -1.01
TCF4-260ENST00000627685 EYSQ5T1H1 3165 aa8.75□□□□□ -1.01
TCF4-260ENST00000627685 TMEM265A0A087WTH1 108 aa8.75□□□□□ -1.01
TCF4-260ENST00000627685 GSTTP1A0A1W2PQM5 241 aa8.75□□□□□ -1.01
TCF4-260ENST00000627685 CDC14CA4D256 554 aa8.75□□□□□ -1.01
TCF4-260ENST00000627685 hCG_1984214I3L0E3 225 aa8.75□□□□□ -1.01
TCF4-260ENST00000627685 DHX15O43143 795 aaKnown RBP8.75□□□□□ -1.01
TCF4-260ENST00000627685 STAM2O75886 525 aa8.75□□□□□ -1.01
TCF4-260ENST00000627685 CCNE2O96020 404 aa8.75□□□□□ -1.01
TCF4-260ENST00000627685 LGALS2P05162 132 aa8.75□□□□□ -1.01
TCF4-260ENST00000627685 MYL3P08590 195 aa8.75□□□□□ -1.01
TCF4-260ENST00000627685 SUPT20HL2P0C7V6 817 aa8.75□□□□□ -1.01
TCF4-260ENST00000627685 VSIG8P0DPA2 414 aa8.75□□□□□ -1.01
TCF4-260ENST00000627685 TGFB3P10600 412 aa8.75□□□□□ -1.01
TCF4-260ENST00000627685 FDPSP14324 419 aaKnown RBP8.75□□□□□ -1.01
TCF4-260ENST00000627685 ANAPC15P60006 121 aa8.75□□□□□ -1.01
TCF4-260ENST00000627685 ZNF200P98182 395 aaPredicted RBP8.75□□□□□ -1.01
TCF4-260ENST00000627685 INSM1Q01101 510 aaPredicted RBP8.75□□□□□ -1.01
TCF4-260ENST00000627685 CENPCQ03188 943 aa8.75□□□□□ -1.01
TCF4-260ENST00000627685 PTPN11Q06124 597 aaPredicted RBP8.75□□□□□ -1.01
TCF4-260ENST00000627685 PPIGQ13427 754 aaKnown RBP eCLIP8.75□□□□□ -1.01
TCF4-260ENST00000627685 XRRA1Q6P2D8 792 aa8.75□□□□□ -1.01
TCF4-260ENST00000627685 METTL7BQ6UX53 244 aa8.75□□□□□ -1.01
TCF4-260ENST00000627685 Q7L0L9 218 aa8.75□□□□□ -1.01
TCF4-260ENST00000627685 TEX2Q8IWB9 1127 aa8.75□□□□□ -1.01
TCF4-260ENST00000627685 VWA5B2Q8N398 1253 aa8.75□□□□□ -1.01
TCF4-260ENST00000627685 DEFB123Q8N688 67 aa8.75□□□□□ -1.01
TCF4-260ENST00000627685 ZNF713Q8N859 430 aaPredicted RBP8.75□□□□□ -1.01
TCF4-260ENST00000627685 RASGRP4Q8TDF6 673 aa8.75□□□□□ -1.01
TCF4-260ENST00000627685 GUCD1Q96NT3 240 aa8.75□□□□□ -1.01
TCF4-260ENST00000627685 SENP7Q9BQF6 1050 aa8.75□□□□□ -1.01
TCF4-260ENST00000627685 ANO3Q9BYT9 981 aa8.75□□□□□ -1.01
TCF4-260ENST00000627685 PPP1R12CQ9BZL4 782 aa8.75□□□□□ -1.01
TCF4-260ENST00000627685 TTYH1Q9H313 450 aaPredicted RBP8.75□□□□□ -1.01
TCF4-260ENST00000627685 PSTPIP2Q9H939 334 aa8.75□□□□□ -1.01
TCF4-260ENST00000627685 MTMR10Q9NXD2 777 aa8.75□□□□□ -1.01
TCF4-260ENST00000627685 RTEL1Q9NZ71 1219 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms