RNA–Protein interactions for RNA: ENST00000624720.1

USB1-216, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

Gene USB1, Length 2,895 nt, Biotype TEC, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-216ENST00000624720 KBTBD3Q8NAB2 608 aa9.96□□□□□ -0.81
USB1-216ENST00000624720 PPP1R14CQ8TAE6 165 aa9.96□□□□□ -0.81
USB1-216ENST00000624720 IPCEF1Q8WWN9 437 aaPredicted RBP9.96□□□□□ -0.81
USB1-216ENST00000624720 CCDC127Q96BQ5 260 aa9.96□□□□□ -0.81
USB1-216ENST00000624720 MOV10L1Q9BXT6 1211 aaKnown RBP9.96□□□□□ -0.81
USB1-216ENST00000624720 GBA3Q9H227 469 aa9.96□□□□□ -0.81
USB1-216ENST00000624720 CCSER2Q9H7U1 834 aa9.96□□□□□ -0.81
USB1-216ENST00000624720 PIH1D3Q9NQM4 214 aaKnown RBP9.96□□□□□ -0.81
USB1-216ENST00000624720 GPHNQ9NQX3 736 aaPredicted RBP9.96□□□□□ -0.81
USB1-216ENST00000624720 FADS3Q9Y5Q0 445 aa9.96□□□□□ -0.81
USB1-216ENST00000624720 KATNA1O75449 491 aa9.96□□□□□ -0.82
USB1-216ENST00000624720 RPS6KA4O75676 772 aa9.96□□□□□ -0.82
USB1-216ENST00000624720 GJA9P57773 515 aa9.96□□□□□ -0.82
USB1-216ENST00000624720 CEBPZQ03701 1054 aaKnown RBP9.96□□□□□ -0.82
USB1-216ENST00000624720 ITGB3BPQ13352 177 aaPredicted RBP9.96□□□□□ -0.82
USB1-216ENST00000624720 NFIXQ14938 502 aa9.96□□□□□ -0.82
USB1-216ENST00000624720 TRIM71Q2Q1W2 868 aaKnown RBP9.96□□□□□ -0.82
USB1-216ENST00000624720 ANKDD1AQ495B1 522 aa9.96□□□□□ -0.82
USB1-216ENST00000624720 LSMEM2Q8N112 164 aa9.96□□□□□ -0.82
USB1-216ENST00000624720 PPFIBP2Q8ND30 876 aa9.96□□□□□ -0.82
USB1-216ENST00000624720 IFT81Q8WYA0 676 aa9.96□□□□□ -0.82
USB1-216ENST00000624720 DPF3Q92784 378 aa9.96□□□□□ -0.82
USB1-216ENST00000624720 PPP1R13BQ96KQ4 1090 aa9.96□□□□□ -0.82
USB1-216ENST00000624720 RMND1Q9NWS8 449 aa9.96□□□□□ -0.82
USB1-216ENST00000624720 ARHGEF38Q9NXL2 777 aa9.96□□□□□ -0.82
USB1-216ENST00000624720 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP9.96□□□□□ -0.82
USB1-216ENST00000624720 PPP1R9AQ9ULJ8 1098 aa9.96□□□□□ -0.82
USB1-216ENST00000624720 FAM32AQ9Y421 112 aaKnown RBP9.96□□□□□ -0.82
USB1-216ENST00000624720 ZNF711Q9Y462 761 aa9.96□□□□□ -0.82
USB1-216ENST00000624720 AOX1Q06278 1338 aa9.96□□□□□ -0.82
USB1-216ENST00000624720 ZNF609O15014 1411 aa9.96□□□□□ -0.82
USB1-216ENST00000624720 TMCC2O75069 709 aa9.95□□□□□ -0.82
USB1-216ENST00000624720 TKTP29401 623 aaKnown RBP9.95□□□□□ -0.82
USB1-216ENST00000624720 TBL3Q12788 808 aaKnown RBP9.95□□□□□ -0.82
USB1-216ENST00000624720 BYSLQ13895 437 aaKnown RBP9.95□□□□□ -0.82
USB1-216ENST00000624720 STK11Q15831 433 aa9.95□□□□□ -0.82
USB1-216ENST00000624720 PPP2R2DQ66LE6 453 aa9.95□□□□□ -0.82
USB1-216ENST00000624720 TMEM214Q6NUQ4 689 aaKnown RBP9.95□□□□□ -0.82
USB1-216ENST00000624720 MTMR12Q9C0I1 747 aa9.95□□□□□ -0.82
USB1-216ENST00000624720 WNK3Q9BYP7 1800 aa9.95□□□□□ -0.82
USB1-216ENST00000624720 GOLGA8IPA6NC78 632 aa9.95□□□□□ -0.82
USB1-216ENST00000624720 POTEB2H3BUK9 544 aa9.95□□□□□ -0.82
USB1-216ENST00000624720 SMIM22K7EJ46 135 aa9.95□□□□□ -0.82
USB1-216ENST00000624720 RPN1P04843 607 aaKnown RBP9.95□□□□□ -0.82
USB1-216ENST00000624720 SARSP49591 514 aaKnown RBP9.95□□□□□ -0.82
USB1-216ENST00000624720 PDE4DQ08499 809 aa9.95□□□□□ -0.82
USB1-216ENST00000624720 RASGRF1Q13972 1273 aa9.95□□□□□ -0.82
USB1-216ENST00000624720 DSTYKQ6XUX3 929 aa9.95□□□□□ -0.82
USB1-216ENST00000624720 FAM9CQ8IZT9 166 aa9.95□□□□□ -0.82
USB1-216ENST00000624720 PAWRQ96IZ0 340 aaKnown RBP9.95□□□□□ -0.82
USB1-216ENST00000624720 NLRP3Q96P20 1036 aa9.95□□□□□ -0.82
USB1-216ENST00000624720 ERP44Q9BS26 406 aa9.95□□□□□ -0.82
USB1-216ENST00000624720 EHD4Q9H223 541 aa9.95□□□□□ -0.82
USB1-216ENST00000624720 SEC63Q9UGP8 760 aaKnown RBP9.95□□□□□ -0.82
USB1-216ENST00000624720 TRIM17Q9Y577 477 aa9.95□□□□□ -0.82
USB1-216ENST00000624720 MYH14Q7Z406 1995 aaKnown RBP9.95□□□□□ -0.82
USB1-216ENST00000624720 MAST3O60307 1309 aa9.94□□□□□ -0.82
USB1-216ENST00000624720 CCDC162PA2VCL2 907 aa9.94□□□□□ -0.82
USB1-216ENST00000624720 CCDC69A6NI79 296 aa9.94□□□□□ -0.82
USB1-216ENST00000624720 CCDC169A6NNP5 214 aa9.94□□□□□ -0.82
USB1-216ENST00000624720 KPNA6O60684 536 aa9.94□□□□□ -0.82
USB1-216ENST00000624720 OXSR1O95747 527 aaPredicted RBP9.94□□□□□ -0.82
USB1-216ENST00000624720 PYGMP11217 842 aa9.94□□□□□ -0.82
USB1-216ENST00000624720 COL6A1P12109 1028 aa9.94□□□□□ -0.82
USB1-216ENST00000624720 GZMAP12544 262 aa9.94□□□□□ -0.82
USB1-216ENST00000624720 CDC25BP30305 580 aa9.94□□□□□ -0.82
USB1-216ENST00000624720 GNGT1P63211 74 aa9.94□□□□□ -0.82
USB1-216ENST00000624720 CCZ1BP86790 482 aa9.94□□□□□ -0.82
USB1-216ENST00000624720 CCZ1P86791 482 aaPredicted RBP9.94□□□□□ -0.82
USB1-216ENST00000624720 SP140Q13342 867 aa9.94□□□□□ -0.82
USB1-216ENST00000624720 TAF1CQ15572 869 aaPredicted RBP9.94□□□□□ -0.82
USB1-216ENST00000624720 TXNRD1Q16881 649 aa9.94□□□□□ -0.82
USB1-216ENST00000624720 MCMDC2Q4G0Z9 681 aa9.94□□□□□ -0.82
USB1-216ENST00000624720 RUFY3Q7L099 469 aa9.94□□□□□ -0.82
USB1-216ENST00000624720 FERMT3Q86UX7 667 aa9.94□□□□□ -0.82
USB1-216ENST00000624720 TXNRD3Q86VQ6 643 aa9.94□□□□□ -0.82
USB1-216ENST00000624720 PROM2Q8N271 834 aa9.94□□□□□ -0.82
USB1-216ENST00000624720 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.94□□□□□ -0.82
USB1-216ENST00000624720 EIF4E1BA6NMX2 242 aaKnown RBP9.94□□□□□ -0.82
USB1-216ENST00000624720 A6NNZ2 444 aa9.94□□□□□ -0.82
USB1-216ENST00000624720 IGF2BP3O00425 579 aaKnown RBP eCLIP9.94□□□□□ -0.82
USB1-216ENST00000624720 CYP21A2P08686 494 aa9.94□□□□□ -0.82
USB1-216ENST00000624720 POLR2EP19388 210 aaKnown RBP9.94□□□□□ -0.82
USB1-216ENST00000624720 AARSP49588 968 aaKnown RBP eCLIP9.94□□□□□ -0.82
USB1-216ENST00000624720 MXI1P50539 228 aa9.94□□□□□ -0.82
USB1-216ENST00000624720 KIF5AQ12840 1032 aa9.94□□□□□ -0.82
USB1-216ENST00000624720 TUBB8Q3ZCM7 444 aa9.94□□□□□ -0.82
USB1-216ENST00000624720 LVRNQ6Q4G3 990 aa9.94□□□□□ -0.82
USB1-216ENST00000624720 BEND5Q7L4P6 421 aa9.94□□□□□ -0.82
USB1-216ENST00000624720 VPS36Q86VN1 386 aa9.94□□□□□ -0.82
USB1-216ENST00000624720 MAGEB6Q8N7X4 407 aa9.94□□□□□ -0.82
USB1-216ENST00000624720 USP38Q8NB14 1042 aa9.94□□□□□ -0.82
USB1-216ENST00000624720 TOR1AIP2Q8NFQ8 470 aa9.94□□□□□ -0.82
USB1-216ENST00000624720 EPS8L3Q8TE67 593 aaKnown RBP9.94□□□□□ -0.82
USB1-216ENST00000624720 DHX38Q92620 1227 aaKnown RBP9.94□□□□□ -0.82
USB1-216ENST00000624720 HIC2Q96JB3 615 aa9.94□□□□□ -0.82
USB1-216ENST00000624720 CLIC5Q9NZA1 410 aa9.94□□□□□ -0.82
USB1-216ENST00000624720 LRP2BPQ9P2M1 347 aa9.94□□□□□ -0.82
USB1-216ENST00000624720 NARFQ9UHQ1 456 aa9.94□□□□□ -0.82
USB1-216ENST00000624720 EVLQ9UI08 416 aaPredicted RBP9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms