RNA–Protein interactions for RNA: ENST00000621399.1

CIRBP-245, Transcript of cold inducible RNA binding protein, humanhuman

TSL 1 (best)

Gene CIRBP, Length 1,044 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-245ENST00000621399 ATL3Q6DD88 541 aa20.78■□□□□ 0.92
CIRBP-245ENST00000621399 MFSD5Q6N075 450 aa20.78■□□□□ 0.92
CIRBP-245ENST00000621399 SH2D3AQ9BRG2 576 aa20.78■□□□□ 0.92
CIRBP-245ENST00000621399 FAM49AQ9H0Q0 323 aaPredicted RBP20.78■□□□□ 0.92
CIRBP-245ENST00000621399 CFAP45Q9UL16 551 aa20.78■□□□□ 0.92
CIRBP-245ENST00000621399 ATP6V1DQ9Y5K8 247 aa20.78■□□□□ 0.92
CIRBP-245ENST00000621399 ZBTB39O15060 712 aa20.77■□□□□ 0.92
CIRBP-245ENST00000621399 MAGEB2O15479 319 aa20.77■□□□□ 0.92
CIRBP-245ENST00000621399 C22orf31O95567 290 aa20.77■□□□□ 0.92
CIRBP-245ENST00000621399 CKBP12277 381 aa20.77■□□□□ 0.92
CIRBP-245ENST00000621399 DNM1Q05193 864 aaKnown RBP20.77■□□□□ 0.92
CIRBP-245ENST00000621399 RBL2Q08999 1139 aa20.77■□□□□ 0.92
CIRBP-245ENST00000621399 TBC1D8BQ0IIM8 1120 aa20.77■□□□□ 0.92
CIRBP-245ENST00000621399 TARBP2Q15633 366 aaKnown RBP20.77■□□□□ 0.92
CIRBP-245ENST00000621399 RSPH3Q86UC2 560 aa20.77■□□□□ 0.92
CIRBP-245ENST00000621399 TMEM199Q8N511 208 aa20.77■□□□□ 0.92
CIRBP-245ENST00000621399 METTL13Q8N6R0 699 aa20.77■□□□□ 0.92
CIRBP-245ENST00000621399 LINC00301Q8NCQ3 95 aa20.77■□□□□ 0.92
CIRBP-245ENST00000621399 DNAJB3Q8WWF6 145 aa20.77■□□□□ 0.92
CIRBP-245ENST00000621399 CEP170P1Q96L14 293 aa20.77■□□□□ 0.92
CIRBP-245ENST00000621399 AK8Q96MA6 479 aa20.77■□□□□ 0.92
CIRBP-245ENST00000621399 NACC1Q96RE7 527 aa20.77■□□□□ 0.92
CIRBP-245ENST00000621399 WNT8AQ9H1J5 351 aa20.77■□□□□ 0.92
CIRBP-245ENST00000621399 CYP26B1Q9NR63 512 aa20.77■□□□□ 0.92
CIRBP-245ENST00000621399 SRPRBQ9Y5M8 271 aaKnown RBP20.77■□□□□ 0.92
CIRBP-245ENST00000621399 SMIM35A0A1B0GVV1 85 aa20.76■□□□□ 0.91
CIRBP-245ENST00000621399 YEATS4O95619 227 aa20.76■□□□□ 0.91
CIRBP-245ENST00000621399 SELPP16109 830 aa20.76■□□□□ 0.91
CIRBP-245ENST00000621399 MUTP22033 750 aa20.76■□□□□ 0.91
CIRBP-245ENST00000621399 LONP1P36776 959 aaKnown RBP20.76■□□□□ 0.91
CIRBP-245ENST00000621399 MAGEA10P43363 369 aaPredicted RBP20.76■□□□□ 0.91
CIRBP-245ENST00000621399 NPEPPSP55786 919 aa20.76■□□□□ 0.91
CIRBP-245ENST00000621399 GRIN1Q05586 938 aa20.76■□□□□ 0.91
CIRBP-245ENST00000621399 ZRSR1Q15695 479 aaKnown RBP20.76■□□□□ 0.91
CIRBP-245ENST00000621399 XKR9Q5GH70 373 aa20.76■□□□□ 0.91
CIRBP-245ENST00000621399 POTEGQ6S5H5 508 aa20.76■□□□□ 0.91
CIRBP-245ENST00000621399 PIGOQ8TEQ8 1089 aa20.76■□□□□ 0.91
CIRBP-245ENST00000621399 CCDC43Q96MW1 224 aaKnown RBP20.76■□□□□ 0.91
CIRBP-245ENST00000621399 ANKEF1Q9NU02 776 aa20.76■□□□□ 0.91
CIRBP-245ENST00000621399 FBXO2Q9UK22 296 aaPredicted RBP20.76■□□□□ 0.91
CIRBP-245ENST00000621399 KIAA1024Q9UPX6 916 aa20.76■□□□□ 0.91
CIRBP-245ENST00000621399 A0A087WWV3 80 aa20.75■□□□□ 0.91
CIRBP-245ENST00000621399 SPTLC2O15270 562 aa20.75■□□□□ 0.91
CIRBP-245ENST00000621399 CAND2O75155 1236 aa20.75■□□□□ 0.91
CIRBP-245ENST00000621399 RPLP2P05387 115 aaKnown RBP20.75■□□□□ 0.91
CIRBP-245ENST00000621399 IQCF3P0C7M6 154 aa20.75■□□□□ 0.91
CIRBP-245ENST00000621399 XRCC6P12956 609 aaKnown RBP eCLIP20.75■□□□□ 0.91
CIRBP-245ENST00000621399 NCLP19338 710 aaKnown RBP20.75■□□□□ 0.91
CIRBP-245ENST00000621399 FPGSQ05932 587 aa20.75■□□□□ 0.91
CIRBP-245ENST00000621399 ECM1Q16610 540 aa20.75■□□□□ 0.91
CIRBP-245ENST00000621399 ZNF618Q5T7W0 954 aa20.75■□□□□ 0.91
CIRBP-245ENST00000621399 EFCAB12Q6NXP0 572 aa20.75■□□□□ 0.91
CIRBP-245ENST00000621399 LRRC8DQ7L1W4 858 aa20.75■□□□□ 0.91
CIRBP-245ENST00000621399 RPAINQ86UA6 219 aa20.75■□□□□ 0.91
CIRBP-245ENST00000621399 KRI1Q8N9T8 703 aaKnown RBP20.75■□□□□ 0.91
CIRBP-245ENST00000621399 ZNF579Q8NAF0 562 aaKnown RBP20.75■□□□□ 0.91
CIRBP-245ENST00000621399 SCLYQ96I15 445 aa20.75■□□□□ 0.91
CIRBP-245ENST00000621399 MMTAG2Q9BU76 263 aaKnown RBP20.75■□□□□ 0.91
CIRBP-245ENST00000621399 CSRNP2Q9H175 543 aa20.75■□□□□ 0.91
CIRBP-245ENST00000621399 SUGCTQ9HAC7 445 aa20.75■□□□□ 0.91
CIRBP-245ENST00000621399 PPME1Q9Y570 386 aa20.75■□□□□ 0.91
CIRBP-245ENST00000621399 MORC2Q9Y6X9 1032 aaPredicted RBP20.75■□□□□ 0.91
CIRBP-245ENST00000621399 CEP290O15078 2479 aa20.75■□□□□ 0.91
CIRBP-245ENST00000621399 RSPH10B2B2RC85 870 aa20.74■□□□□ 0.91
CIRBP-245ENST00000621399 CTSHP09668 335 aa20.74■□□□□ 0.91
CIRBP-245ENST00000621399 RSPH10BP0C881 870 aa20.74■□□□□ 0.91
CIRBP-245ENST00000621399 CSF2RAP15509 400 aa20.74■□□□□ 0.91
CIRBP-245ENST00000621399 TMOD1P28289 359 aa20.74■□□□□ 0.91
CIRBP-245ENST00000621399 UBA7P41226 1012 aa20.74■□□□□ 0.91
CIRBP-245ENST00000621399 CABP7Q86V35 215 aa20.74■□□□□ 0.91
CIRBP-245ENST00000621399 KIAA0319LQ8IZA0 1049 aa20.74■□□□□ 0.91
CIRBP-245ENST00000621399 CLIC6Q96NY7 704 aa20.74■□□□□ 0.91
CIRBP-245ENST00000621399 CEP89Q96ST8 783 aa20.74■□□□□ 0.91
CIRBP-245ENST00000621399 DDX19AQ9NUU7 478 aaKnown RBP20.74■□□□□ 0.91
CIRBP-245ENST00000621399 PPP6R2O75170 966 aa20.73■□□□□ 0.91
CIRBP-245ENST00000621399 MAFO75444 373 aaPredicted RBP20.73■□□□□ 0.91
CIRBP-245ENST00000621399 RFC5P40937 340 aa20.73■□□□□ 0.91
CIRBP-245ENST00000621399 POLGP54098 1239 aaPredicted RBP20.73■□□□□ 0.91
CIRBP-245ENST00000621399 EXOC8Q8IYI6 725 aa20.73■□□□□ 0.91
CIRBP-245ENST00000621399 NME8Q8N427 588 aa20.73■□□□□ 0.91
CIRBP-245ENST00000621399 LRRC71Q8N4P6 559 aa20.73■□□□□ 0.91
CIRBP-245ENST00000621399 SLC7A3Q8WY07 619 aa20.73■□□□□ 0.91
CIRBP-245ENST00000621399 CDK5RAP3Q96JB5 506 aa20.73■□□□□ 0.91
CIRBP-245ENST00000621399 JPH2Q9BR39 696 aaPredicted RBP20.73■□□□□ 0.91
CIRBP-245ENST00000621399 MYH9P35579 1960 aaKnown RBP20.73■□□□□ 0.91
CIRBP-245ENST00000621399 KDM3AQ9Y4C1 1321 aa20.73■□□□□ 0.91
CIRBP-245ENST00000621399 RFC2P35250 354 aa20.72■□□□□ 0.91
CIRBP-245ENST00000621399 RARRES1P49788 294 aa20.72■□□□□ 0.91
CIRBP-245ENST00000621399 DNM2P50570 870 aa20.72■□□□□ 0.91
CIRBP-245ENST00000621399 CLCN3P51790 818 aa20.72■□□□□ 0.91
CIRBP-245ENST00000621399 KRT85P78386 507 aa20.72■□□□□ 0.91
CIRBP-245ENST00000621399 TMEM62Q0P6H9 643 aa20.72■□□□□ 0.91
CIRBP-245ENST00000621399 PPIGQ13427 754 aaKnown RBP eCLIP20.72■□□□□ 0.914e-12■■■□□ 16.7
CIRBP-245ENST00000621399 SPECC1Q5M775 1068 aa20.72■□□□□ 0.91
CIRBP-245ENST00000621399 IER5Q5VY09 327 aa20.72■□□□□ 0.91
CIRBP-245ENST00000621399 TRAF7Q6Q0C0 670 aa20.72■□□□□ 0.91
CIRBP-245ENST00000621399 KCNG4Q8TDN1 519 aa20.72■□□□□ 0.91
CIRBP-245ENST00000621399 GDF15Q99988 308 aa20.72■□□□□ 0.91
CIRBP-245ENST00000621399 DBR1Q9UK59 544 aaKnown RBP20.72■□□□□ 0.91
CIRBP-245ENST00000621399 CIZ1Q9ULV3 898 aaPredicted RBP20.72■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms