RNA–Protein interactions for RNA: ENST00000618902.1

SHMT1-211, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 5 BASIC

Gene SHMT1, Length 378 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-211ENST00000618902 ADAM17P78536 824 aa5.89□□□□□ -1.47
SHMT1-211ENST00000618902 KRT76Q01546 638 aa5.89□□□□□ -1.47
SHMT1-211ENST00000618902 PTGDRQ13258 359 aa5.89□□□□□ -1.47
SHMT1-211ENST00000618902 PPP2R5CQ13362 524 aa5.89□□□□□ -1.47
SHMT1-211ENST00000618902 ORC2Q13416 577 aaPredicted RBP5.89□□□□□ -1.47
SHMT1-211ENST00000618902 PLCB4Q15147 1175 aa5.89□□□□□ -1.47
SHMT1-211ENST00000618902 PTPAQ15257 358 aa5.89□□□□□ -1.47
SHMT1-211ENST00000618902 RAB30Q15771 203 aa5.89□□□□□ -1.47
SHMT1-211ENST00000618902 CALCRLQ16602 461 aa5.89□□□□□ -1.47
SHMT1-211ENST00000618902 PTGISQ16647 500 aa5.89□□□□□ -1.47
SHMT1-211ENST00000618902 KIAA0753Q2KHM9 967 aa5.89□□□□□ -1.47
SHMT1-211ENST00000618902 TRIM71Q2Q1W2 868 aaKnown RBP5.89□□□□□ -1.47
SHMT1-211ENST00000618902 GDF6Q6KF10 455 aaPredicted RBP5.89□□□□□ -1.47
SHMT1-211ENST00000618902 ZNF746Q6NUN9 644 aaPredicted RBP5.89□□□□□ -1.47
SHMT1-211ENST00000618902 SWSAP1Q6NVH7 229 aa5.89□□□□□ -1.47
SHMT1-211ENST00000618902 ZNF579Q8NAF0 562 aaKnown RBP5.89□□□□□ -1.47
SHMT1-211ENST00000618902 LRRC15Q8TF66 581 aa5.89□□□□□ -1.47
SHMT1-211ENST00000618902 TRAPPC12Q8WVT3 735 aa5.89□□□□□ -1.47
SHMT1-211ENST00000618902 DHX38Q92620 1227 aaKnown RBP5.89□□□□□ -1.47
SHMT1-211ENST00000618902 APBB2Q92870 758 aa5.89□□□□□ -1.47
SHMT1-211ENST00000618902 BADQ92934 168 aa5.89□□□□□ -1.47
SHMT1-211ENST00000618902 FAM20AQ96MK3 541 aa5.89□□□□□ -1.47
SHMT1-211ENST00000618902 USP28Q96RU2 1077 aa5.89□□□□□ -1.47
SHMT1-211ENST00000618902 CEP89Q96ST8 783 aa5.89□□□□□ -1.47
SHMT1-211ENST00000618902 TEKT3Q9BXF9 490 aa5.89□□□□□ -1.47
SHMT1-211ENST00000618902 OSBPL7Q9BZF2 842 aa5.89□□□□□ -1.47
SHMT1-211ENST00000618902 AZI2Q9H6S1 392 aa5.89□□□□□ -1.47
SHMT1-211ENST00000618902 DISC1Q9NRI5 854 aa5.89□□□□□ -1.47
SHMT1-211ENST00000618902 TRMT13Q9NUP7 481 aaKnown RBP5.89□□□□□ -1.47
SHMT1-211ENST00000618902 RGL1Q9NZL6 768 aa5.89□□□□□ -1.47
SHMT1-211ENST00000618902 HDAC6Q9UBN7 1215 aa5.89□□□□□ -1.47
SHMT1-211ENST00000618902 ZMYND8Q9ULU4 1186 aaPredicted RBP5.89□□□□□ -1.47
SHMT1-211ENST00000618902 CEP131Q9UPN4 1083 aa5.89□□□□□ -1.47
SHMT1-211ENST00000618902 UMODL1Q5DID0 1318 aa5.89□□□□□ -1.47
SHMT1-211ENST00000618902 IGSF9BQ9UPX0 1349 aa5.89□□□□□ -1.47
SHMT1-211ENST00000618902 MYH9P35579 1960 aaKnown RBP5.88□□□□□ -1.47
SHMT1-211ENST00000618902 ABHD14A-ACY1A0A1B0GW23 586 aa5.88□□□□□ -1.47
SHMT1-211ENST00000618902 C17orf102A2RUQ5 167 aa5.88□□□□□ -1.47
SHMT1-211ENST00000618902 POTEMA6NI47 508 aa5.88□□□□□ -1.47
SHMT1-211ENST00000618902 WDR64B1ANS9 1081 aa5.88□□□□□ -1.47
SHMT1-211ENST00000618902 TBX3O15119 743 aa5.88□□□□□ -1.47
SHMT1-211ENST00000618902 F13A1P00488 732 aa5.88□□□□□ -1.47
SHMT1-211ENST00000618902 OR52Z1P0C646 297 aa5.88□□□□□ -1.47
SHMT1-211ENST00000618902 SPATA31C1P0DKV0 1188 aa5.88□□□□□ -1.47
SHMT1-211ENST00000618902 SMIM10L2AP0DMW4 78 aa5.88□□□□□ -1.47
SHMT1-211ENST00000618902 SMIM10L2BP0DMW5 78 aa5.88□□□□□ -1.47
SHMT1-211ENST00000618902 CYP2C9P11712 490 aa5.88□□□□□ -1.47
SHMT1-211ENST00000618902 SELPP16109 830 aa5.88□□□□□ -1.47
SHMT1-211ENST00000618902 SYN1P17600 705 aa5.88□□□□□ -1.47
SHMT1-211ENST00000618902 CHMP4BP1P59074 171 aa5.88□□□□□ -1.47
SHMT1-211ENST00000618902 UBE2HP62256 183 aa5.88□□□□□ -1.47
SHMT1-211ENST00000618902 ATP2C1P98194 919 aaPredicted RBP5.88□□□□□ -1.47
SHMT1-211ENST00000618902 MDM2Q00987 491 aaPredicted RBP5.88□□□□□ -1.47
SHMT1-211ENST00000618902 GNL2Q13823 731 aaKnown RBP5.88□□□□□ -1.47
SHMT1-211ENST00000618902 GPNMBQ14956 572 aa5.88□□□□□ -1.47
SHMT1-211ENST00000618902 EPHA7Q15375 998 aa5.88□□□□□ -1.47
SHMT1-211ENST00000618902 ECM1Q16610 540 aa5.88□□□□□ -1.47
SHMT1-211ENST00000618902 FOXD4L6Q3SYB3 417 aaPredicted RBP5.88□□□□□ -1.47
SHMT1-211ENST00000618902 TPRNQ4KMQ1 711 aa5.88□□□□□ -1.47
SHMT1-211ENST00000618902 MARCH8Q5T0T0 291 aa5.88□□□□□ -1.47
SHMT1-211ENST00000618902 FAM160B1Q5W0V3 765 aa5.88□□□□□ -1.47
SHMT1-211ENST00000618902 ATL3Q6DD88 541 aa5.88□□□□□ -1.47
SHMT1-211ENST00000618902 NCAPH2Q6IBW4 605 aa5.88□□□□□ -1.47
SHMT1-211ENST00000618902 MIS18BP1Q6P0N0 1132 aa5.88□□□□□ -1.47
SHMT1-211ENST00000618902 TRAF7Q6Q0C0 670 aa5.88□□□□□ -1.47
SHMT1-211ENST00000618902 FOXD4L3Q6VB84 417 aaPredicted RBP5.88□□□□□ -1.47
SHMT1-211ENST00000618902 RUFY4Q6ZNE9 571 aa5.88□□□□□ -1.47
SHMT1-211ENST00000618902 MIER3Q7Z3K6 550 aa5.88□□□□□ -1.47
SHMT1-211ENST00000618902 BRAPQ7Z569 592 aa5.88□□□□□ -1.47
SHMT1-211ENST00000618902 SERINC5Q86VE9 423 aa5.88□□□□□ -1.47
SHMT1-211ENST00000618902 GAS2L3Q86XJ1 694 aa5.88□□□□□ -1.47
SHMT1-211ENST00000618902 KCTD17Q8N5Z5 321 aa5.88□□□□□ -1.47
SHMT1-211ENST00000618902 BANK1Q8NDB2 785 aa5.88□□□□□ -1.47
SHMT1-211ENST00000618902 DYDC2Q96IM9 177 aa5.88□□□□□ -1.47
SHMT1-211ENST00000618902 FAM167AQ96KS9 214 aa5.88□□□□□ -1.47
SHMT1-211ENST00000618902 RNPC3Q96LT9 517 aaKnown RBP5.88□□□□□ -1.47
SHMT1-211ENST00000618902 SLC9A7Q96T83 725 aa5.88□□□□□ -1.47
SHMT1-211ENST00000618902 HSD17B14Q9BPX1 270 aa5.88□□□□□ -1.47
SHMT1-211ENST00000618902 JPH2Q9BR39 696 aaPredicted RBP5.88□□□□□ -1.47
SHMT1-211ENST00000618902 MMTAG2Q9BU76 263 aaKnown RBP5.88□□□□□ -1.47
SHMT1-211ENST00000618902 SETD4Q9NVD3 440 aa5.88□□□□□ -1.47
SHMT1-211ENST00000618902 TFIP11Q9UBB9 837 aaKnown RBP5.88□□□□□ -1.47
SHMT1-211ENST00000618902 GABBR1Q9UBS5 961 aa5.88□□□□□ -1.47
SHMT1-211ENST00000618902 PCDHA10Q9Y5I2 948 aa5.88□□□□□ -1.47
SHMT1-211ENST00000618902 MAFBQ9Y5Q3 323 aaPredicted RBP5.88□□□□□ -1.47
SHMT1-211ENST00000618902 STK24Q9Y6E0 443 aa5.88□□□□□ -1.47
SHMT1-211ENST00000618902 COL1A2P08123 1366 aa5.88□□□□□ -1.47
SHMT1-211ENST00000618902 EVPLQ92817 2033 aa5.87□□□□□ -1.47
SHMT1-211ENST00000618902 MBLAC1A4D2B0 266 aaPredicted RBP5.87□□□□□ -1.47
SHMT1-211ENST00000618902 BACH1O14867 736 aa5.87□□□□□ -1.47
SHMT1-211ENST00000618902 MAGEB2O15479 319 aa5.87□□□□□ -1.47
SHMT1-211ENST00000618902 TREHO43280 583 aa5.87□□□□□ -1.47
SHMT1-211ENST00000618902 MED24O75448 989 aa5.87□□□□□ -1.47
SHMT1-211ENST00000618902 SLITRK3O94933 977 aa5.87□□□□□ -1.47
SHMT1-211ENST00000618902 IQCF3P0C7M6 154 aa5.87□□□□□ -1.47
SHMT1-211ENST00000618902 INSRRP14616 1297 aa5.87□□□□□ -1.47
SHMT1-211ENST00000618902 CDC25AP30304 524 aa5.87□□□□□ -1.47
SHMT1-211ENST00000618902 CYP2C18P33260 490 aa5.87□□□□□ -1.47
SHMT1-211ENST00000618902 TECP42680 631 aa5.87□□□□□ -1.47
SHMT1-211ENST00000618902 FXR2P51116 673 aaKnown RBP eCLIP5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 94.4 ms