RNA–Protein interactions for RNA: ENST00000618469.1

BRCA1-228, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 718 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-228ENST00000618469 ALYREFQ86V81 257 aaKnown RBP18.05■□□□□ 0.48
BRCA1-228ENST00000618469 CKAP2LQ8IYA6 745 aa18.05■□□□□ 0.48
BRCA1-228ENST00000618469 ETNPPLQ8TBG4 499 aa18.05■□□□□ 0.48
BRCA1-228ENST00000618469 ATP8B4Q8TF62 1192 aa18.05■□□□□ 0.48
BRCA1-228ENST00000618469 UNC45AQ9H3U1 944 aa18.05■□□□□ 0.48
BRCA1-228ENST00000618469 DISC1Q9NRI5 854 aa18.05■□□□□ 0.48
BRCA1-228ENST00000618469 GABBR1Q9UBS5 961 aa18.05■□□□□ 0.48
BRCA1-228ENST00000618469 BTBD18B2RXH4 712 aa18.04■□□□□ 0.48
BRCA1-228ENST00000618469 PSMD10O75832 226 aa18.04■□□□□ 0.48
BRCA1-228ENST00000618469 BAIAP3O94812 1187 aa18.04■□□□□ 0.48
BRCA1-228ENST00000618469 JAK3P52333 1124 aa18.04■□□□□ 0.48
BRCA1-228ENST00000618469 TRMT1LQ7Z2T5 733 aaKnown RBP18.04■□□□□ 0.48
BRCA1-228ENST00000618469 RSPH3Q86UC2 560 aa18.04■□□□□ 0.48
BRCA1-228ENST00000618469 FAM184AQ8NB25 1140 aa18.04■□□□□ 0.48
BRCA1-228ENST00000618469 C8orf76Q96K31 380 aa18.04■□□□□ 0.48
BRCA1-228ENST00000618469 NAP1L4Q99733 375 aaKnown RBP18.04■□□□□ 0.48
BRCA1-228ENST00000618469 FAM49AQ9H0Q0 323 aaPredicted RBP18.04■□□□□ 0.48
BRCA1-228ENST00000618469 MTUS1Q9ULD2 1270 aa18.04■□□□□ 0.48
BRCA1-228ENST00000618469 COG5Q9UP83 839 aa18.04■□□□□ 0.48
BRCA1-228ENST00000618469 MICAL3Q7RTP6 2002 aa18.04■□□□□ 0.48
BRCA1-228ENST00000618469 BRWD1Q9NSI6 2320 aa18.04■□□□□ 0.48
BRCA1-228ENST00000618469 LCHNA4D1U4 455 aa18.03■□□□□ 0.48
BRCA1-228ENST00000618469 HBP1O60381 514 aa18.03■□□□□ 0.48
BRCA1-228ENST00000618469 CD2BP2O95400 341 aaKnown RBP18.03■□□□□ 0.48
BRCA1-228ENST00000618469 POU3F3P20264 500 aaPredicted RBP18.03■□□□□ 0.48
BRCA1-228ENST00000618469 SFNP31947 248 aa18.03■□□□□ 0.48
BRCA1-228ENST00000618469 KCNJ6P48051 423 aa18.03■□□□□ 0.48
BRCA1-228ENST00000618469 TCTN1Q2MV58 587 aa18.03■□□□□ 0.48
BRCA1-228ENST00000618469 PPP4R3AQ6IN85 833 aa18.03■□□□□ 0.48
BRCA1-228ENST00000618469 MIER3Q7Z3K6 550 aa18.03■□□□□ 0.48
BRCA1-228ENST00000618469 POTEDQ86YR6 584 aa18.03■□□□□ 0.48
BRCA1-228ENST00000618469 HERC6Q8IVU3 1022 aa18.03■□□□□ 0.48
BRCA1-228ENST00000618469 GDPD5Q8WTR4 605 aa18.03■□□□□ 0.48
BRCA1-228ENST00000618469 DNAJB3Q8WWF6 145 aa18.03■□□□□ 0.48
BRCA1-228ENST00000618469 SLC9A7Q96T83 725 aa18.03■□□□□ 0.48
BRCA1-228ENST00000618469 MAFBQ9Y5Q3 323 aaPredicted RBP18.03■□□□□ 0.48
BRCA1-228ENST00000618469 COL1A2P08123 1366 aa18.03■□□□□ 0.48
BRCA1-228ENST00000618469 LPXNO60711 386 aa18.02■□□□□ 0.48
BRCA1-228ENST00000618469 ATP4AP20648 1035 aa18.02■□□□□ 0.48
BRCA1-228ENST00000618469 WDR5P61964 334 aaKnown RBP18.02■□□□□ 0.48
BRCA1-228ENST00000618469 PRKCEQ02156 737 aa18.02■□□□□ 0.48
BRCA1-228ENST00000618469 SAFBQ15424 915 aaKnown RBP eCLIP18.02■□□□□ 0.48
BRCA1-228ENST00000618469 UGCGQ16739 394 aa18.02■□□□□ 0.48
BRCA1-228ENST00000618469 BBXQ8WY36 941 aaPredicted RBP18.02■□□□□ 0.48
BRCA1-228ENST00000618469 KCNMB3Q9NPA1 279 aa18.02■□□□□ 0.48
BRCA1-228ENST00000618469 MTHFD1LQ6UB35 978 aa18.01■□□□□ 0.47
BRCA1-228ENST00000618469 RPAINQ86UA6 219 aa18.01■□□□□ 0.47
BRCA1-228ENST00000618469 RDM1Q8NG50 284 aa18.01■□□□□ 0.47
BRCA1-228ENST00000618469 FAM167AQ96KS9 214 aa18.01■□□□□ 0.47
BRCA1-228ENST00000618469 PCDHA2Q9Y5H9 948 aa18.01■□□□□ 0.47
BRCA1-228ENST00000618469 MUC6Q6W4X9 2439 aa18■□□□□ 0.47
BRCA1-228ENST00000618469 MARCH6O60337 910 aa18■□□□□ 0.47
BRCA1-228ENST00000618469 GPR37L1O60883 481 aa18■□□□□ 0.47
BRCA1-228ENST00000618469 CHRNA1P02708 482 aa18■□□□□ 0.47
BRCA1-228ENST00000618469 OATP04181 439 aa18■□□□□ 0.47
BRCA1-228ENST00000618469 RPLP2P05387 115 aaKnown RBP18■□□□□ 0.47
BRCA1-228ENST00000618469 GHRP10912 638 aa18■□□□□ 0.47
BRCA1-228ENST00000618469 DEFB103AP81534 67 aa18■□□□□ 0.47
BRCA1-228ENST00000618469 MRPS6P82932 125 aaKnown RBP18■□□□□ 0.47
BRCA1-228ENST00000618469 MGAT3Q09327 533 aa18■□□□□ 0.47
BRCA1-228ENST00000618469 TMEM62Q0P6H9 643 aa18■□□□□ 0.47
BRCA1-228ENST00000618469 PLEKHG4Q58EX7 1191 aa18■□□□□ 0.47
BRCA1-228ENST00000618469 ZNF484Q5JVG2 852 aa18■□□□□ 0.47
BRCA1-228ENST00000618469 FAM26DQ5JW98 314 aa18■□□□□ 0.47
BRCA1-228ENST00000618469 B3GNT9Q6UX72 402 aa18■□□□□ 0.47
BRCA1-228ENST00000618469 DBF4BQ8NFT6 615 aa18■□□□□ 0.47
BRCA1-228ENST00000618469 SEPT8Q92599 483 aa18■□□□□ 0.47
BRCA1-228ENST00000618469 TMX3Q96JJ7 454 aa18■□□□□ 0.47
BRCA1-228ENST00000618469 FAM20AQ96MK3 541 aa18■□□□□ 0.47
BRCA1-228ENST00000618469 BACH2Q9BYV9 841 aa18■□□□□ 0.47
BRCA1-228ENST00000618469 OSBPL7Q9BZF2 842 aa18■□□□□ 0.47
BRCA1-228ENST00000618469 VAV3Q9UKW4 847 aa18■□□□□ 0.47
BRCA1-228ENST00000618469 CDY2AQ9Y6F7 541 aa18■□□□□ 0.47
BRCA1-228ENST00000618469 ABHD14A-ACY1A0A1B0GW23 586 aa17.99■□□□□ 0.47
BRCA1-228ENST00000618469 ZBTB42B2RXF5 422 aa17.99■□□□□ 0.47
BRCA1-228ENST00000618469 KIF28PB7ZC32 967 aa17.99■□□□□ 0.47
BRCA1-228ENST00000618469 M0QZ92 97 aa17.99■□□□□ 0.47
BRCA1-228ENST00000618469 WNT7AO00755 349 aa17.99■□□□□ 0.47
BRCA1-228ENST00000618469 TBX3O15119 743 aa17.99■□□□□ 0.47
BRCA1-228ENST00000618469 ZNF862O60290 1169 aa17.99■□□□□ 0.47
BRCA1-228ENST00000618469 EFCAB14O75071 495 aa17.99■□□□□ 0.47
BRCA1-228ENST00000618469 C22orf31O95567 290 aa17.99■□□□□ 0.47
BRCA1-228ENST00000618469 KLRC1P26715 233 aa17.99■□□□□ 0.47
BRCA1-228ENST00000618469 IKBKEQ14164 716 aa17.99■□□□□ 0.47
BRCA1-228ENST00000618469 IFIH1Q9BYX4 1025 aaKnown RBP17.99■□□□□ 0.47
BRCA1-228ENST00000618469 CEP131Q9UPN4 1083 aa17.99■□□□□ 0.47
BRCA1-228ENST00000618469 LOXHD1Q8IVV2 1947 aa17.98■□□□□ 0.47
BRCA1-228ENST00000618469 SMIM35A0A1B0GVV1 85 aa17.98■□□□□ 0.47
BRCA1-228ENST00000618469 NEMFO60524 1076 aa17.98■□□□□ 0.47
BRCA1-228ENST00000618469 MCM2P49736 904 aa17.98■□□□□ 0.47
BRCA1-228ENST00000618469 PPP2R5CQ13362 524 aa17.98■□□□□ 0.47
BRCA1-228ENST00000618469 GNL2Q13823 731 aaKnown RBP17.98■□□□□ 0.47
BRCA1-228ENST00000618469 BANK1Q8NDB2 785 aa17.98■□□□□ 0.47
BRCA1-228ENST00000618469 FBXO18Q8NFZ0 1043 aa17.98■□□□□ 0.47
BRCA1-228ENST00000618469 PHOSPHO2Q8TCD6 241 aa17.98■□□□□ 0.47
BRCA1-228ENST00000618469 HAS1Q92839 578 aa17.98■□□□□ 0.47
BRCA1-228ENST00000618469 ZBED2Q9BTP6 218 aa17.98■□□□□ 0.47
BRCA1-228ENST00000618469 SEPT9Q9UHD8 586 aaPredicted RBP17.98■□□□□ 0.47
BRCA1-228ENST00000618469 TRPV2Q9Y5S1 764 aa17.98■□□□□ 0.47
BRCA1-228ENST00000618469 PI4K2BG5E9Z4 385 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms