RNA–Protein interactions for RNA: ENST00000618327.4

CIITA-213, Transcript of class II major histocompatibility complex transactivator, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CIITA, Length 4,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-213ENST00000618327 RGPD1P0DJD0 1748 aa15.08■□□□□ 0
CIITA-213ENST00000618327 HIP1RO75146 1068 aa15.08■□□□□ 0
CIITA-213ENST00000618327 HDXQ7Z353 690 aa15.08■□□□□ 0
CIITA-213ENST00000618327 SLC35F6Q8N357 371 aa15.08■□□□□ 0
CIITA-213ENST00000618327 DPF2Q92785 391 aa15.08■□□□□ 0
CIITA-213ENST00000618327 SPATA33Q96N06 139 aa15.08■□□□□ 0
CIITA-213ENST00000618327 RIT2Q99578 217 aa15.08■□□□□ 0
CIITA-213ENST00000618327 FAM198AQ9UFP1 575 aa15.08■□□□□ 0
CIITA-213ENST00000618327 NPHP3-ACAD11A0A0J9YXS1 232 aa15.08■□□□□ 0
CIITA-213ENST00000618327 TEX33O43247 280 aa15.08■□□□□ 0
CIITA-213ENST00000618327 ZEB2O60315 1214 aa15.08■□□□□ 0
CIITA-213ENST00000618327 SERPING1P05155 500 aa15.08■□□□□ 0
CIITA-213ENST00000618327 FMR1Q06787 632 aaKnown RBP eCLIP15.08■□□□□ 0
CIITA-213ENST00000618327 KCNH2Q12809 1159 aa15.08■□□□□ 0
CIITA-213ENST00000618327 PTPROQ16827 1216 aa15.08■□□□□ 0
CIITA-213ENST00000618327 ANKRD40Q6AI12 368 aa15.08■□□□□ 0
CIITA-213ENST00000618327 PSPC1Q8WXF1 523 aaKnown RBP15.08■□□□□ 0
CIITA-213ENST00000618327 UTP11Q9Y3A2 253 aaKnown RBP15.08■□□□□ 0
CIITA-213ENST00000618327 LDHAP00338 332 aaKnown RBP15.07■□□□□ 0
CIITA-213ENST00000618327 ZNF365Q70YC5 407 aa15.07■□□□□ 0
CIITA-213ENST00000618327 IFT20Q8IY31 132 aa15.07■□□□□ 0
CIITA-213ENST00000618327 ELOA2Q8IYF1 753 aaPredicted RBP15.07■□□□□ 0
CIITA-213ENST00000618327 ANKS4BQ8N8V4 417 aa15.07■□□□□ 0
CIITA-213ENST00000618327 XPOTO43592 962 aaKnown RBP15.07■□□□□ 0
CIITA-213ENST00000618327 DDNO94850 711 aaPredicted RBP15.07■□□□□ 0
CIITA-213ENST00000618327 RPA1P27694 616 aa15.07■□□□□ 0
CIITA-213ENST00000618327 STK4Q13043 487 aa15.07■□□□□ 0
CIITA-213ENST00000618327 MAPK6Q16659 721 aa15.07■□□□□ 0
CIITA-213ENST00000618327 KCNV1Q6PIU1 500 aa15.07■□□□□ 0
CIITA-213ENST00000618327 TTC16Q8NEE8 873 aa15.07■□□□□ 0
CIITA-213ENST00000618327 FAM49AQ9H0Q0 323 aaPredicted RBP15.07■□□□□ 0
CIITA-213ENST00000618327 SPTLC3Q9NUV7 552 aa15.07■□□□□ 0
CIITA-213ENST00000618327 TLR3O15455 904 aaKnown RBP15.07■□□□□ 0
CIITA-213ENST00000618327 CCDC144BQ3MJ40 725 aa15.07■□□□□ 0
CIITA-213ENST00000618327 CFAP58Q5T655 872 aa15.07■□□□□ 0
CIITA-213ENST00000618327 CHST13Q8NET6 341 aa15.07■□□□□ 0
CIITA-213ENST00000618327 HESX1Q9UBX0 185 aa15.07■□□□□ 0
CIITA-213ENST00000618327 A0A1W2PRG0 241 aa15.07■□□□□ 0
CIITA-213ENST00000618327 ONECUT3O60422 494 aaPredicted RBP15.07■□□□□ 0
CIITA-213ENST00000618327 CYP27A1Q02318 531 aa15.07■□□□□ 0
CIITA-213ENST00000618327 CYFIP1Q7L576 1253 aa15.07■□□□□ 0
CIITA-213ENST00000618327 KCNH7Q9NS40 1196 aa15.07■□□□□ 0
CIITA-213ENST00000618327 PPP2R3BQ9Y5P8 575 aa15.07■□□□□ 0
CIITA-213ENST00000618327 CLDN3O15551 220 aa15.06■□□□□ 0
CIITA-213ENST00000618327 SURF1Q15526 300 aa15.06■□□□□ 0
CIITA-213ENST00000618327 RNF34Q969K3 372 aa15.06■□□□□ 0
CIITA-213ENST00000618327 ZBTB9Q96C00 473 aa15.06■□□□□ 0
CIITA-213ENST00000618327 TRIM31Q9BZY9 425 aa15.06■□□□□ 0
CIITA-213ENST00000618327 LRRC37A3O60309 1634 aa15.06■□□□□ 0
CIITA-213ENST00000618327 SLC25A27O95847 323 aa15.06■□□□□ 0
CIITA-213ENST00000618327 POLR2BP30876 1174 aaKnown RBP15.06■□□□□ 0
CIITA-213ENST00000618327 KIF11P52732 1056 aa15.06■□□□□ 0
CIITA-213ENST00000618327 TAAR1Q96RJ0 339 aa15.06■□□□□ 0
CIITA-213ENST00000618327 RPS6KC1Q96S38 1066 aa15.06■□□□□ 0
CIITA-213ENST00000618327 POLR3FQ9H1D9 316 aaPredicted RBP15.06■□□□□ 0
CIITA-213ENST00000618327 MAFGO15525 162 aa15.06■□□□□ 0
CIITA-213ENST00000618327 COL9A3Q14050 684 aaPredicted RBP15.06■□□□□ 0
CIITA-213ENST00000618327 LONRF2Q1L5Z9 754 aa15.06■□□□□ 0
CIITA-213ENST00000618327 XRRA1Q6P2D8 792 aa15.06■□□□□ 0
CIITA-213ENST00000618327 HAUS6Q7Z4H7 955 aa15.06■□□□□ 0
CIITA-213ENST00000618327 LRRC45Q96CN5 670 aa15.06■□□□□ 0
CIITA-213ENST00000618327 REEP2Q9BRK0 252 aa15.06■□□□□ 0
CIITA-213ENST00000618327 KIAA1586Q9HCI6 787 aa15.06■□□□□ 0
CIITA-213ENST00000618327 PARP2Q9UGN5 583 aa15.06■□□□□ 0
CIITA-213ENST00000618327 HPSEQ9Y251 543 aa15.06■□□□□ 0
CIITA-213ENST00000618327 PFASO15067 1338 aa15.06■□□□□ 0
CIITA-213ENST00000618327 TXNP10599 105 aaKnown RBP15.05■□□□□ 0
CIITA-213ENST00000618327 VCAM1P19320 739 aa15.05■□□□□ 0
CIITA-213ENST00000618327 NMT1P30419 496 aaKnown RBP15.05■□□□□ 0
CIITA-213ENST00000618327 STAT5BP51692 787 aa15.05■□□□□ 0
CIITA-213ENST00000618327 MOXD1Q6UVY6 613 aa15.05■□□□□ 0
CIITA-213ENST00000618327 SH2D3AQ9BRG2 576 aa15.05■□□□□ 0
CIITA-213ENST00000618327 ABHD10Q9NUJ1 306 aa15.05■□□□□ 0
CIITA-213ENST00000618327 ODF2LQ9ULJ1 636 aa15.05■□□□□ 0
CIITA-213ENST00000618327 MSH4O15457 936 aa15.05■□□□□ 0
CIITA-213ENST00000618327 EHHADHQ08426 723 aa15.05■□□□□ 0
CIITA-213ENST00000618327 THNSL1Q8IYQ7 743 aa15.05■□□□□ 0
CIITA-213ENST00000618327 RPF1Q9H9Y2 349 aaKnown RBP15.05■□□□□ 0
CIITA-213ENST00000618327 CEP72Q9P209 647 aa15.05■□□□□ 0
CIITA-213ENST00000618327 PPP1R9AQ9ULJ8 1098 aa15.05■□□□□ 0
CIITA-213ENST00000618327 PDXKO00764 312 aa15.05■□□□□ -0
CIITA-213ENST00000618327 GGPS1O95749 300 aa15.05■□□□□ -0
CIITA-213ENST00000618327 EPHX2P34913 555 aa15.05■□□□□ -0
CIITA-213ENST00000618327 SREBF1P36956 1147 aa15.05■□□□□ -0
CIITA-213ENST00000618327 CPLX4Q7Z7G2 160 aa15.05■□□□□ -0
CIITA-213ENST00000618327 PCDHAC2Q9Y5I4 1007 aa15.05■□□□□ -0
CIITA-213ENST00000618327 ENC1O14682 589 aa15.05■□□□□ -0
CIITA-213ENST00000618327 XKR3Q5GH77 459 aa15.05■□□□□ -0
CIITA-213ENST00000618327 CCDC105Q8IYK2 499 aa15.05■□□□□ -0
CIITA-213ENST00000618327 GPC2Q8N158 579 aa15.05■□□□□ -0
CIITA-213ENST00000618327 NXF1Q9UBU9 619 aaKnown RBP15.05■□□□□ -0
CIITA-213ENST00000618327 ADAMTS1Q9UHI8 967 aa15.05■□□□□ -0
CIITA-213ENST00000618327 CYTH3O43739 400 aa15.04■□□□□ -0
CIITA-213ENST00000618327 GCLMP48507 274 aa15.04■□□□□ -0
CIITA-213ENST00000618327 ERCC6LQ2NKX8 1250 aa15.04■□□□□ -0
CIITA-213ENST00000618327 DNAJC21Q5F1R6 531 aaKnown RBP15.04■□□□□ -0
CIITA-213ENST00000618327 ERO1BQ86YB8 467 aa15.04■□□□□ -0
CIITA-213ENST00000618327 MAIP1Q8WWC4 291 aa15.04■□□□□ -0
CIITA-213ENST00000618327 MIS12Q9H081 205 aa15.04■□□□□ -0
CIITA-213ENST00000618327 CDC23Q9UJX2 597 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms