RNA–Protein interactions for RNA: ENST00000618056.4

PMS1-220, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5 BASIC

Gene PMS1, Length 1,468 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-220ENST00000618056 GUCD1Q96NT3 240 aa28■■■□□ 2.07
PMS1-220ENST00000618056 IFIH1Q9BYX4 1025 aaKnown RBP28■■■□□ 2.07
PMS1-220ENST00000618056 YBX2Q9Y2T7 364 aaKnown RBP28■■■□□ 2.07
PMS1-220ENST00000618056 SQORQ9Y6N5 450 aa28■■■□□ 2.07
PMS1-220ENST00000618056 KDM3AQ9Y4C1 1321 aa28■■■□□ 2.07
PMS1-220ENST00000618056 M0QZ92 97 aa27.99■■■□□ 2.07
PMS1-220ENST00000618056 MAGEB2O15479 319 aa27.99■■■□□ 2.07
PMS1-220ENST00000618056 NEMFO60524 1076 aa27.99■■■□□ 2.07
PMS1-220ENST00000618056 FBXO47Q5MNV8 452 aa27.99■■■□□ 2.07
PMS1-220ENST00000618056 KIAA0319LQ8IZA0 1049 aa27.99■■■□□ 2.07
PMS1-220ENST00000618056 FAM161BQ96MY7 647 aa27.99■■■□□ 2.07
PMS1-220ENST00000618056 ZNF576Q9H609 170 aa27.99■■■□□ 2.07
PMS1-220ENST00000618056 TRPV2Q9Y5S1 764 aa27.99■■■□□ 2.07
PMS1-220ENST00000618056 GHRP10912 638 aa27.98■■■□□ 2.07
PMS1-220ENST00000618056 PSMC5P62195 406 aa27.98■■■□□ 2.07
PMS1-220ENST00000618056 DEFB103AP81534 67 aa27.98■■■□□ 2.07
PMS1-220ENST00000618056 LPIN1Q14693 890 aa27.98■■■□□ 2.07
PMS1-220ENST00000618056 CALCRLQ16602 461 aa27.98■■■□□ 2.07
PMS1-220ENST00000618056 XKR3Q5GH77 459 aa27.98■■■□□ 2.07
PMS1-220ENST00000618056 NOSTRINQ8IVI9 506 aa27.98■■■□□ 2.07
PMS1-220ENST00000618056 NIFKQ9BYG3 293 aaKnown RBP27.98■■■□□ 2.07
PMS1-220ENST00000618056 TRANK1O15050 2925 aa27.98■■■□□ 2.07
PMS1-220ENST00000618056 STBD1O95210 358 aa27.97■■■□□ 2.07
PMS1-220ENST00000618056 U2AF2P26368 475 aaKnown RBP eCLIP27.97■■■□□ 2.072e-7■■■■□ 24.4
PMS1-220ENST00000618056 ORC2Q13416 577 aaPredicted RBP27.97■■■□□ 2.07
PMS1-220ENST00000618056 TARBP2Q15633 366 aaKnown RBP27.97■■■□□ 2.07
PMS1-220ENST00000618056 TSHZ1Q6ZSZ6 1077 aa27.97■■■□□ 2.07
PMS1-220ENST00000618056 USP38Q8NB14 1042 aa27.97■■■□□ 2.07
PMS1-220ENST00000618056 MTMR9Q96QG7 549 aa27.97■■■□□ 2.07
PMS1-220ENST00000618056 CELF4Q9BZC1 486 aaKnown RBP27.97■■■□□ 2.07
PMS1-220ENST00000618056 TTC3P53804 2025 aa27.97■■■□□ 2.07
PMS1-220ENST00000618056 RBAK-RBAKDNI3L0D1 243 aa27.96■■■□□ 2.07
PMS1-220ENST00000618056 TMEM62Q0P6H9 643 aa27.96■■■□□ 2.07
PMS1-220ENST00000618056 GNL2Q13823 731 aaKnown RBP27.96■■■□□ 2.07
PMS1-220ENST00000618056 EPHA7Q15375 998 aa27.96■■■□□ 2.07
PMS1-220ENST00000618056 BANK1Q8NDB2 785 aa27.96■■■□□ 2.07
PMS1-220ENST00000618056 NKX2-4Q9H2Z4 354 aa27.96■■■□□ 2.07
PMS1-220ENST00000618056 PCDHA12Q9UN75 941 aa27.96■■■□□ 2.07
PMS1-220ENST00000618056 KIF28PB7ZC32 967 aa27.95■■■□□ 2.07
PMS1-220ENST00000618056 DKC1O60832 514 aaKnown RBP eCLIP27.95■■■□□ 2.07
PMS1-220ENST00000618056 P4HBP07237 508 aaKnown RBP27.95■■■□□ 2.07
PMS1-220ENST00000618056 QARSP47897 775 aaKnown RBP27.95■■■□□ 2.07
PMS1-220ENST00000618056 TRAPPC10P48553 1259 aa27.95■■■□□ 2.07
PMS1-220ENST00000618056 LINC01465Q8N7H1 131 aa27.95■■■□□ 2.07
PMS1-220ENST00000618056 SLC28A3Q9HAS3 691 aa27.95■■■□□ 2.07
PMS1-220ENST00000618056 STXBP5LQ9Y2K9 1186 aa27.95■■■□□ 2.07
PMS1-220ENST00000618056 EYSQ5T1H1 3165 aa27.95■■■□□ 2.07
PMS1-220ENST00000618056 MYOGP15173 224 aa27.95■■■□□ 2.06
PMS1-220ENST00000618056 LIN28BQ6ZN17 250 aaKnown RBP eCLIP27.95■■■□□ 2.06
PMS1-220ENST00000618056 METTL13Q8N6R0 699 aa27.95■■■□□ 2.06
PMS1-220ENST00000618056 SEPT9Q9UHD8 586 aaPredicted RBP27.95■■■□□ 2.06
PMS1-220ENST00000618056 ZSCAN21Q9Y5A6 473 aaPredicted RBP27.95■■■□□ 2.06
PMS1-220ENST00000618056 GJB5O95377 273 aa27.94■■■□□ 2.06
PMS1-220ENST00000618056 AMHP03971 560 aa27.94■■■□□ 2.06
PMS1-220ENST00000618056 ATP2B1P20020 1258 aa27.94■■■□□ 2.06
PMS1-220ENST00000618056 GJB2P29033 226 aa27.94■■■□□ 2.06
PMS1-220ENST00000618056 NCAPH2Q6IBW4 605 aa27.94■■■□□ 2.06
PMS1-220ENST00000618056 CEP89Q96ST8 783 aa27.94■■■□□ 2.06
PMS1-220ENST00000618056 CDX2Q99626 313 aaPredicted RBP27.94■■■□□ 2.06
PMS1-220ENST00000618056 TTC12Q9H892 705 aaPredicted RBP27.94■■■□□ 2.06
PMS1-220ENST00000618056 AGO3Q9H9G7 860 aaKnown RBP27.94■■■□□ 2.06
PMS1-220ENST00000618056 ARID2Q68CP9 1835 aa27.94■■■□□ 2.06
PMS1-220ENST00000618056 TMOD1P28289 359 aa27.93■■■□□ 2.06
PMS1-220ENST00000618056 MCM7P33993 719 aa27.93■■■□□ 2.06
PMS1-220ENST00000618056 EFCAB12Q6NXP0 572 aa27.93■■■□□ 2.06
PMS1-220ENST00000618056 ANO5Q75V66 913 aa27.93■■■□□ 2.06
PMS1-220ENST00000618056 ZNF710Q8N1W2 664 aa27.93■■■□□ 2.06
PMS1-220ENST00000618056 TMEM60Q9H2L4 133 aa27.93■■■□□ 2.06
PMS1-220ENST00000618056 LOC101059915A0A1B0GWI6 518 aaPredicted RBP27.92■■■□□ 2.06
PMS1-220ENST00000618056 TLL1O43897 1013 aa27.92■■■□□ 2.06
PMS1-220ENST00000618056 TBC1D8BQ0IIM8 1120 aa27.92■■■□□ 2.06
PMS1-220ENST00000618056 GRIN2CQ14957 1233 aa27.92■■■□□ 2.06
PMS1-220ENST00000618056 FAM43BQ6ZT52 329 aaPredicted RBP27.92■■■□□ 2.06
PMS1-220ENST00000618056 LXNQ9BS40 222 aa27.92■■■□□ 2.06
PMS1-220ENST00000618056 NOL7Q9UMY1 257 aaKnown RBP27.92■■■□□ 2.06
PMS1-220ENST00000618056 SMC3Q9UQE7 1217 aa27.92■■■□□ 2.06
PMS1-220ENST00000618056 DDX11L8A8MPP1 907 aa27.91■■■□□ 2.06
PMS1-220ENST00000618056 CA3P07451 260 aa27.91■■■□□ 2.06
PMS1-220ENST00000618056 TXKP42681 527 aa27.91■■■□□ 2.06
PMS1-220ENST00000618056 CLCN3P51790 818 aa27.91■■■□□ 2.06
PMS1-220ENST00000618056 CUL4AQ13619 759 aa27.91■■■□□ 2.06
PMS1-220ENST00000618056 MTERF2Q49AM1 385 aa27.91■■■□□ 2.06
PMS1-220ENST00000618056 TTC38Q5R3I4 469 aa27.91■■■□□ 2.06
PMS1-220ENST00000618056 PPP2R2DQ66LE6 453 aa27.91■■■□□ 2.06
PMS1-220ENST00000618056 TMCO2Q7Z6W1 182 aaPredicted RBP27.91■■■□□ 2.06
PMS1-220ENST00000618056 C4orf19Q8IY42 314 aa27.91■■■□□ 2.06
PMS1-220ENST00000618056 MYOCDQ8IZQ8 938 aa27.91■■■□□ 2.06
PMS1-220ENST00000618056 MAP7D2Q96T17 732 aa27.91■■■□□ 2.06
PMS1-220ENST00000618056 RAD9AQ99638 391 aa27.91■■■□□ 2.06
PMS1-220ENST00000618056 ZBED2Q9BTP6 218 aa27.91■■■□□ 2.06
PMS1-220ENST00000618056 WRAP73Q9P2S5 460 aaPredicted RBP27.91■■■□□ 2.06
PMS1-220ENST00000618056 PRUNE2Q8WUY3 3088 aa27.91■■■□□ 2.06
PMS1-220ENST00000618056 TMEM150BA6NC51 233 aa27.9■■■□□ 2.06
PMS1-220ENST00000618056 CD52P31358 61 aa27.9■■■□□ 2.06
PMS1-220ENST00000618056 LRRC71Q8N4P6 559 aa27.9■■■□□ 2.06
PMS1-220ENST00000618056 TOP1MTQ969P6 601 aa27.9■■■□□ 2.06
PMS1-220ENST00000618056 ZSWIM4Q9H7M6 989 aa27.9■■■□□ 2.06
PMS1-220ENST00000618056 PPME1Q9Y570 386 aa27.9■■■□□ 2.06
PMS1-220ENST00000618056 IGKV6-21A0A0C4DH24 114 aa27.89■■■□□ 2.06
PMS1-220ENST00000618056 GPR32O75388 356 aa27.89■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms