RNA–Protein interactions for RNA: ENST00000613214.4

TNXB-209, Transcript of tenascin XB, humanhuman

TSL 5 BASIC

Gene TNXB, Length 6,842 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNXB-209ENST00000613214 KRT80Q6KB66 452 aa16.58■□□□□ 0.24
TNXB-209ENST00000613214 NHEJ1Q9H9Q4 299 aaPredicted RBP16.58■□□□□ 0.24
TNXB-209ENST00000613214 PCDHB6Q9Y5E3 794 aa16.58■□□□□ 0.24
TNXB-209ENST00000613214 TMEM247A6NEH6 219 aa16.57■□□□□ 0.24
TNXB-209ENST00000613214 USP17L5A8MUK1 530 aa16.57■□□□□ 0.24
TNXB-209ENST00000613214 MTMR1Q13613 665 aa16.57■□□□□ 0.24
TNXB-209ENST00000613214 ADCK2Q7Z695 626 aa16.57■□□□□ 0.24
TNXB-209ENST00000613214 NUDCD3Q8IVD9 361 aa16.57■□□□□ 0.24
TNXB-209ENST00000613214 SEPT12Q8IYM1 358 aa16.57■□□□□ 0.24
TNXB-209ENST00000613214 MMP19Q99542 508 aa16.57■□□□□ 0.24
TNXB-209ENST00000613214 CARMIL3Q8ND23 1372 aa16.57■□□□□ 0.24
TNXB-209ENST00000613214 CHEK2O96017 543 aa16.57■□□□□ 0.24
TNXB-209ENST00000613214 MXI1P50539 228 aa16.57■□□□□ 0.24
TNXB-209ENST00000613214 PSMC1P62191 440 aaKnown RBP16.57■□□□□ 0.24
TNXB-209ENST00000613214 ZNF772Q68DY9 489 aaPredicted RBP16.57■□□□□ 0.24
TNXB-209ENST00000613214 TTLL6Q8N841 843 aa16.57■□□□□ 0.24
TNXB-209ENST00000613214 BBOF1Q8ND07 529 aa16.57■□□□□ 0.24
TNXB-209ENST00000613214 SRPK1Q96SB4 655 aaKnown RBP16.57■□□□□ 0.24
TNXB-209ENST00000613214 BHMT2Q9H2M3 363 aa16.57■□□□□ 0.24
TNXB-209ENST00000613214 NOVA2Q9UNW9 492 aaKnown RBP16.57■□□□□ 0.24
TNXB-209ENST00000613214 PCDHA5Q9Y5H7 936 aa16.57■□□□□ 0.24
TNXB-209ENST00000613214 RASSF3Q86WH2 238 aa16.57■□□□□ 0.24
TNXB-209ENST00000613214 GJB4Q9NTQ9 266 aa16.57■□□□□ 0.24
TNXB-209ENST00000613214 TMEM260Q9NX78 707 aa16.57■□□□□ 0.24
TNXB-209ENST00000613214 FOSP01100 380 aaPredicted RBP16.57■□□□□ 0.24
TNXB-209ENST00000613214 STAT3P40763 770 aa16.57■□□□□ 0.24
TNXB-209ENST00000613214 ANKRD40Q6AI12 368 aa16.57■□□□□ 0.24
TNXB-209ENST00000613214 C11orf57Q6ZUT1 292 aaPredicted RBP16.57■□□□□ 0.24
TNXB-209ENST00000613214 TRAIPQ9BWF2 469 aa16.57■□□□□ 0.24
TNXB-209ENST00000613214 KANSL2Q9H9L4 492 aa16.57■□□□□ 0.24
TNXB-209ENST00000613214 SAYSD1Q9NPB0 183 aa16.57■□□□□ 0.24
TNXB-209ENST00000613214 PYCARDQ9ULZ3 195 aa16.57■□□□□ 0.24
TNXB-209ENST00000613214 SPAG7O75391 227 aa16.57■□□□□ 0.24
TNXB-209ENST00000613214 RAET1EQ8TD07 263 aa16.57■□□□□ 0.24
TNXB-209ENST00000613214 GPT2Q8TD30 523 aa16.57■□□□□ 0.24
TNXB-209ENST00000613214 DOLKQ9UPQ8 538 aa16.57■□□□□ 0.24
TNXB-209ENST00000613214 CMA1P23946 247 aa16.56■□□□□ 0.24
TNXB-209ENST00000613214 CENPAP49450 140 aa16.56■□□□□ 0.24
TNXB-209ENST00000613214 CATSPER3Q86XQ3 398 aa16.56■□□□□ 0.24
TNXB-209ENST00000613214 LEMD3Q9Y2U8 911 aa16.56■□□□□ 0.24
TNXB-209ENST00000613214 MAP3K7O43318 606 aa16.56■□□□□ 0.24
TNXB-209ENST00000613214 GRAMD1BQ3KR37 738 aa16.56■□□□□ 0.24
TNXB-209ENST00000613214 GPATCH4Q5T3I0 446 aaKnown RBP16.56■□□□□ 0.24
TNXB-209ENST00000613214 CCNYL1Q8N7R7 359 aa16.56■□□□□ 0.24
TNXB-209ENST00000613214 ULK4Q96C45 1275 aa16.56■□□□□ 0.24
TNXB-209ENST00000613214 TRPV6Q9H1D0 765 aa16.56■□□□□ 0.24
TNXB-209ENST00000613214 SP110Q9HB58 689 aa16.56■□□□□ 0.24
TNXB-209ENST00000613214 KLHL11Q9NVR0 708 aa16.56■□□□□ 0.24
TNXB-209ENST00000613214 DBNLQ9UJU6 430 aaKnown RBP16.56■□□□□ 0.24
TNXB-209ENST00000613214 EDC4Q6P2E9 1401 aaKnown RBP16.56■□□□□ 0.24
TNXB-209ENST00000613214 TSPY1Q01534 308 aa16.56■□□□□ 0.24
TNXB-209ENST00000613214 COBLL1Q53SF7 1204 aa16.56■□□□□ 0.24
TNXB-209ENST00000613214 MDH1BQ5I0G3 518 aa16.56■□□□□ 0.24
TNXB-209ENST00000613214 SH2D3AQ9BRG2 576 aa16.56■□□□□ 0.24
TNXB-209ENST00000613214 CCDC197Q8NCU1 140 aa16.56■□□□□ 0.24
TNXB-209ENST00000613214 RMDN3Q96TC7 470 aa16.56■□□□□ 0.24
TNXB-209ENST00000613214 JPH2Q9BR39 696 aaPredicted RBP16.56■□□□□ 0.24
TNXB-209ENST00000613214 MTMR6Q9Y217 621 aa16.56■□□□□ 0.24
TNXB-209ENST00000613214 M0QYV0 167 aa16.56■□□□□ 0.24
TNXB-209ENST00000613214 ZNF699Q32M78 642 aa16.56■□□□□ 0.24
TNXB-209ENST00000613214 LMBRD2Q68DH5 695 aaPredicted RBP16.56■□□□□ 0.24
TNXB-209ENST00000613214 ELMSAN1Q6PJG2 1045 aa16.56■□□□□ 0.24
TNXB-209ENST00000613214 SLC13A1Q9BZW2 595 aa16.56■□□□□ 0.24
TNXB-209ENST00000613214 GAP43P17677 238 aa16.56■□□□□ 0.24
TNXB-209ENST00000613214 MAP2K2P36507 400 aa16.56■□□□□ 0.24
TNXB-209ENST00000613214 PRAMEF18Q5VWM3 479 aa16.56■□□□□ 0.24
TNXB-209ENST00000613214 SWSAP1Q6NVH7 229 aa16.56■□□□□ 0.24
TNXB-209ENST00000613214 NDUFAF2Q8N183 169 aa16.56■□□□□ 0.24
TNXB-209ENST00000613214 SLC26A7Q8TE54 656 aa16.56■□□□□ 0.24
TNXB-209ENST00000613214 CCDC51Q96ER9 411 aa16.56■□□□□ 0.24
TNXB-209ENST00000613214 LBHD1Q9BQE6 289 aaPredicted RBP16.56■□□□□ 0.24
TNXB-209ENST00000613214 PCDHA13Q9Y5I0 950 aa16.56■□□□□ 0.24
TNXB-209ENST00000613214 GRIK1P39086 918 aa16.55■□□□□ 0.24
TNXB-209ENST00000613214 NNMTP40261 264 aa16.55■□□□□ 0.24
TNXB-209ENST00000613214 SLC10A5Q5PT55 438 aa16.55■□□□□ 0.24
TNXB-209ENST00000613214 ZNF746Q6NUN9 644 aaPredicted RBP16.55■□□□□ 0.24
TNXB-209ENST00000613214 TMEM270Q6UE05 265 aa16.55■□□□□ 0.24
TNXB-209ENST00000613214 SAAL1Q96ER3 474 aa16.55■□□□□ 0.24
TNXB-209ENST00000613214 DYRK4Q9NR20 520 aa16.55■□□□□ 0.24
TNXB-209ENST00000613214 AOX1Q06278 1338 aa16.55■□□□□ 0.24
TNXB-209ENST00000613214 ITSN2Q9NZM3 1697 aa16.55■□□□□ 0.24
TNXB-209ENST00000613214 CAPN15O75808 1086 aa16.55■□□□□ 0.24
TNXB-209ENST00000613214 TCP1P17987 556 aaKnown RBP16.55■□□□□ 0.24
TNXB-209ENST00000613214 CRKP46108 304 aa16.55■□□□□ 0.24
TNXB-209ENST00000613214 GCLMP48507 274 aa16.55■□□□□ 0.24
TNXB-209ENST00000613214 POLE2P56282 527 aa16.55■□□□□ 0.24
TNXB-209ENST00000613214 LMNB2Q03252 620 aa16.55■□□□□ 0.24
TNXB-209ENST00000613214 FLOT2Q14254 428 aa16.55■□□□□ 0.24
TNXB-209ENST00000613214 WDR11Q9BZH6 1224 aa16.55■□□□□ 0.24
TNXB-209ENST00000613214 TMEM206Q9H813 350 aa16.55■□□□□ 0.24
TNXB-209ENST00000613214 ZSWIM5Q9P217 1185 aa16.55■□□□□ 0.24
TNXB-209ENST00000613214 MKRN4PQ13434 485 aaPredicted RBP16.55■□□□□ 0.24
TNXB-209ENST00000613214 CLDN3O15551 220 aa16.55■□□□□ 0.24
TNXB-209ENST00000613214 KLHL29Q96CT2 875 aa16.55■□□□□ 0.24
TNXB-209ENST00000613214 DACH2Q96NX9 599 aa16.55■□□□□ 0.24
TNXB-209ENST00000613214 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.55■□□□□ 0.24
TNXB-209ENST00000613214 GPC3P51654 580 aa16.55■□□□□ 0.24
TNXB-209ENST00000613214 MRPL47Q9HD33 250 aaKnown RBP16.55■□□□□ 0.24
TNXB-209ENST00000613214 FAM217BQ9NTX9 383 aaPredicted RBP16.55■□□□□ 0.24
TNXB-209ENST00000613214 ANAPC7Q9UJX3 599 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms