RNA–Protein interactions for RNA: ENST00000612350.1

PTCHD3P1-201, Transcript of patched domain containing 3 pseudogene 1, humanhuman

BASIC

Gene PTCHD3P1, Length 537 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3P1-201ENST00000612350 CD52P31358 61 aa8.38□□□□□ -1.07
PTCHD3P1-201ENST00000612350 ARHGAP4P98171 946 aa8.38□□□□□ -1.07
PTCHD3P1-201ENST00000612350 N4BP2L1Q5TBK1 243 aaPredicted RBP8.38□□□□□ -1.07
PTCHD3P1-201ENST00000612350 XRRA1Q6P2D8 792 aa8.38□□□□□ -1.07
PTCHD3P1-201ENST00000612350 LRSAM1Q6UWE0 723 aa8.38□□□□□ -1.07
PTCHD3P1-201ENST00000612350 MRPL43Q8N983 215 aaKnown RBP8.38□□□□□ -1.07
PTCHD3P1-201ENST00000612350 SECISBP2LQ93073 1101 aaKnown RBP8.38□□□□□ -1.07
PTCHD3P1-201ENST00000612350 OSBP2Q969R2 916 aa8.38□□□□□ -1.07
PTCHD3P1-201ENST00000612350 ACSF2Q96CM8 615 aaPredicted RBP8.38□□□□□ -1.07
PTCHD3P1-201ENST00000612350 KCNK17Q96T54 332 aa8.38□□□□□ -1.07
PTCHD3P1-201ENST00000612350 FTHL17Q9BXU8 183 aa8.38□□□□□ -1.07
PTCHD3P1-201ENST00000612350 CWH43Q9H720 699 aa8.38□□□□□ -1.07
PTCHD3P1-201ENST00000612350 GPCPD1Q9NPB8 672 aa8.38□□□□□ -1.07
PTCHD3P1-201ENST00000612350 ENTPD7Q9NQZ7 604 aa8.38□□□□□ -1.07
PTCHD3P1-201ENST00000612350 TYW1Q9NV66 732 aaKnown RBP8.38□□□□□ -1.07
PTCHD3P1-201ENST00000612350 IGSF9Q9P2J2 1179 aa8.38□□□□□ -1.07
PTCHD3P1-201ENST00000612350 PUF60Q9UHX1 559 aaKnown RBP8.38□□□□□ -1.07
PTCHD3P1-201ENST00000612350 CA14Q9ULX7 337 aa8.38□□□□□ -1.07
PTCHD3P1-201ENST00000612350 SMG5Q9UPR3 1016 aaKnown RBP8.38□□□□□ -1.07
PTCHD3P1-201ENST00000612350 DYNC1LI1Q9Y6G9 523 aaKnown RBP8.38□□□□□ -1.07
PTCHD3P1-201ENST00000612350 LOXHD1Q8IVV2 1947 aa8.38□□□□□ -1.07
PTCHD3P1-201ENST00000612350 C2orf71A6NGG8 1288 aa8.37□□□□□ -1.07
PTCHD3P1-201ENST00000612350 UBA1P22314 1058 aaKnown RBP8.37□□□□□ -1.07
PTCHD3P1-201ENST00000612350 TDO2P48775 406 aa8.37□□□□□ -1.07
PTCHD3P1-201ENST00000612350 SPOUT1Q5T280 376 aaKnown RBP8.37□□□□□ -1.07
PTCHD3P1-201ENST00000612350 FAM102BQ5T8I3 360 aa8.37□□□□□ -1.07
PTCHD3P1-201ENST00000612350 ARHGEF16Q5VV41 709 aa8.37□□□□□ -1.07
PTCHD3P1-201ENST00000612350 ZSCAN25Q6NSZ9 544 aa8.37□□□□□ -1.07
PTCHD3P1-201ENST00000612350 TAF2Q6P1X5 1199 aa8.37□□□□□ -1.07
PTCHD3P1-201ENST00000612350 KCNV1Q6PIU1 500 aa8.37□□□□□ -1.07
PTCHD3P1-201ENST00000612350 OTOP3Q7RTS5 596 aa8.37□□□□□ -1.07
PTCHD3P1-201ENST00000612350 IFNL3Q8IZI9 196 aa8.37□□□□□ -1.07
PTCHD3P1-201ENST00000612350 ZNF454Q8N9F8 522 aa8.37□□□□□ -1.07
PTCHD3P1-201ENST00000612350 KDF1Q8NAX2 398 aaPredicted RBP8.37□□□□□ -1.07
PTCHD3P1-201ENST00000612350 RSAD2Q8WXG1 361 aa8.37□□□□□ -1.07
PTCHD3P1-201ENST00000612350 GPKOWQ92917 476 aaPredicted RBP eCLIP8.37□□□□□ -1.07
PTCHD3P1-201ENST00000612350 GPR20Q99678 358 aa8.37□□□□□ -1.07
PTCHD3P1-201ENST00000612350 USP26Q9BXU7 913 aa8.37□□□□□ -1.07
PTCHD3P1-201ENST00000612350 TMX1Q9H3N1 280 aa8.37□□□□□ -1.07
PTCHD3P1-201ENST00000612350 PXMP2Q9NR77 195 aa8.37□□□□□ -1.07
PTCHD3P1-201ENST00000612350 FBXO4Q9UKT5 387 aa8.37□□□□□ -1.07
PTCHD3P1-201ENST00000612350 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.37□□□□□ -1.07
PTCHD3P1-201ENST00000612350 PCDHGA2Q9Y5H1 932 aa8.37□□□□□ -1.07
PTCHD3P1-201ENST00000612350 CDY2AQ9Y6F7 541 aa8.37□□□□□ -1.07
PTCHD3P1-201ENST00000612350 SQORQ9Y6N5 450 aa8.37□□□□□ -1.07
PTCHD3P1-201ENST00000612350 FLNBO75369 2602 aaKnown RBP8.36□□□□□ -1.07
PTCHD3P1-201ENST00000612350 NRCAMQ92823 1304 aa8.36□□□□□ -1.07
PTCHD3P1-201ENST00000612350 LOC105378220A0A1B0GUY1 285 aaPredicted RBP8.36□□□□□ -1.07
PTCHD3P1-201ENST00000612350 TBKBP1A7MCY6 615 aa8.36□□□□□ -1.07
PTCHD3P1-201ENST00000612350 C1QTNF9BB2RNN3 333 aa8.36□□□□□ -1.07
PTCHD3P1-201ENST00000612350 PATL2C9JE40 543 aaKnown RBP8.36□□□□□ -1.07
PTCHD3P1-201ENST00000612350 TBC1D4O60343 1298 aa8.36□□□□□ -1.07
PTCHD3P1-201ENST00000612350 LRRN2O75325 713 aa8.36□□□□□ -1.07
PTCHD3P1-201ENST00000612350 C1QTNF9P0C862 333 aa8.36□□□□□ -1.07
PTCHD3P1-201ENST00000612350 TGFB3P10600 412 aa8.36□□□□□ -1.07
PTCHD3P1-201ENST00000612350 RFX1P22670 979 aa8.36□□□□□ -1.07
PTCHD3P1-201ENST00000612350 SARSP49591 514 aaKnown RBP8.36□□□□□ -1.07
PTCHD3P1-201ENST00000612350 SPEM2Q0P670 501 aa8.36□□□□□ -1.07
PTCHD3P1-201ENST00000612350 HDAC1Q13547 482 aaPredicted RBP8.36□□□□□ -1.07
PTCHD3P1-201ENST00000612350 USH1GQ495M9 461 aa8.36□□□□□ -1.07
PTCHD3P1-201ENST00000612350 TMC7Q7Z402 723 aa8.36□□□□□ -1.07
PTCHD3P1-201ENST00000612350 GPR149Q86SP6 731 aa8.36□□□□□ -1.07
PTCHD3P1-201ENST00000612350 TRIM50Q86XT4 487 aa8.36□□□□□ -1.07
PTCHD3P1-201ENST00000612350 SIRT2Q8IXJ6 389 aa8.36□□□□□ -1.07
PTCHD3P1-201ENST00000612350 CLASRPQ8N2M8 674 aaKnown RBP8.36□□□□□ -1.07
PTCHD3P1-201ENST00000612350 SLC44A3Q8N4M1 653 aa8.36□□□□□ -1.07
PTCHD3P1-201ENST00000612350 SLC22A17Q8WUG5 538 aa8.36□□□□□ -1.07
PTCHD3P1-201ENST00000612350 DNAJB3Q8WWF6 145 aa8.36□□□□□ -1.07
PTCHD3P1-201ENST00000612350 ATRIPQ8WXE1 791 aa8.36□□□□□ -1.07
PTCHD3P1-201ENST00000612350 KIF1BPQ96EK5 621 aa8.36□□□□□ -1.07
PTCHD3P1-201ENST00000612350 DDX27Q96GQ7 796 aaKnown RBP8.36□□□□□ -1.07
PTCHD3P1-201ENST00000612350 PDCD2LQ9BRP1 358 aa8.36□□□□□ -1.07
PTCHD3P1-201ENST00000612350 LARP6Q9BRS8 491 aaKnown RBP8.36□□□□□ -1.07
PTCHD3P1-201ENST00000612350 FOXQ1Q9C009 403 aa8.36□□□□□ -1.07
PTCHD3P1-201ENST00000612350 MLXIPQ9HAP2 919 aa8.36□□□□□ -1.07
PTCHD3P1-201ENST00000612350 LRFN2Q9ULH4 789 aa8.36□□□□□ -1.07
PTCHD3P1-201ENST00000612350 PADI3Q9ULW8 664 aa8.36□□□□□ -1.07
PTCHD3P1-201ENST00000612350 TELO2Q9Y4R8 837 aa8.36□□□□□ -1.07
PTCHD3P1-201ENST00000612350 FRYLO94915 3013 aa8.36□□□□□ -1.07
PTCHD3P1-201ENST00000612350 PATJQ8NI35 1801 aa8.36□□□□□ -1.07
PTCHD3P1-201ENST00000612350 C2orf16Q68DN1 1984 aa8.35□□□□□ -1.07
PTCHD3P1-201ENST00000612350 MIA3Q5JRA6 1907 aa8.35□□□□□ -1.07
PTCHD3P1-201ENST00000612350 DOCK8Q8NF50 2099 aa8.35□□□□□ -1.07
PTCHD3P1-201ENST00000612350 MBLAC1A4D2B0 266 aaPredicted RBP8.35□□□□□ -1.07
PTCHD3P1-201ENST00000612350 TSPY2A6NKD2 308 aa8.35□□□□□ -1.07
PTCHD3P1-201ENST00000612350 TM4SF5O14894 197 aa8.35□□□□□ -1.07
PTCHD3P1-201ENST00000612350 GPAA1O43292 621 aa8.35□□□□□ -1.07
PTCHD3P1-201ENST00000612350 N4BP1O75113 896 aaKnown RBP8.35□□□□□ -1.07
PTCHD3P1-201ENST00000612350 IFIT2P09913 472 aaKnown RBP8.35□□□□□ -1.07
PTCHD3P1-201ENST00000612350 PDHBP11177 359 aa8.35□□□□□ -1.07
PTCHD3P1-201ENST00000612350 SRFP11831 508 aa8.35□□□□□ -1.07
PTCHD3P1-201ENST00000612350 EPCAMP16422 314 aa8.35□□□□□ -1.07
PTCHD3P1-201ENST00000612350 LAG3P18627 525 aa8.35□□□□□ -1.07
PTCHD3P1-201ENST00000612350 FOSBP53539 338 aa8.35□□□□□ -1.07
PTCHD3P1-201ENST00000612350 STARD6P59095 220 aa8.35□□□□□ -1.07
PTCHD3P1-201ENST00000612350 MRPS6P82932 125 aaKnown RBP8.35□□□□□ -1.07
PTCHD3P1-201ENST00000612350 CSTF1Q05048 431 aaKnown RBP8.35□□□□□ -1.07
PTCHD3P1-201ENST00000612350 RING1Q06587 406 aa8.35□□□□□ -1.07
PTCHD3P1-201ENST00000612350 PPARAQ07869 468 aa8.35□□□□□ -1.07
PTCHD3P1-201ENST00000612350 ZNF543Q08ER8 600 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms