RNA–Protein interactions for RNA: ENST00000611848.1

SMAD4-217, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-217ENST00000611848 MARK3P27448 753 aa9.88□□□□□ -0.83
SMAD4-217ENST00000611848 TOB1P50616 345 aaPredicted RBP9.88□□□□□ -0.83
SMAD4-217ENST00000611848 PPFIA1Q13136 1202 aa9.88□□□□□ -0.83
SMAD4-217ENST00000611848 STK38Q15208 465 aa9.88□□□□□ -0.83
SMAD4-217ENST00000611848 ANO6Q4KMQ2 910 aa9.88□□□□□ -0.83
SMAD4-217ENST00000611848 AXDND1Q5T1B0 1012 aaPredicted RBP9.88□□□□□ -0.83
SMAD4-217ENST00000611848 POTEBQ6S5H4 581 aa9.88□□□□□ -0.83
SMAD4-217ENST00000611848 CCDC155Q8N6L0 562 aa9.88□□□□□ -0.83
SMAD4-217ENST00000611848 CAGE1Q8TC20 777 aa9.88□□□□□ -0.83
SMAD4-217ENST00000611848 ATP8B4Q8TF62 1192 aa9.88□□□□□ -0.83
SMAD4-217ENST00000611848 PPP1R13LQ8WUF5 828 aa9.88□□□□□ -0.83
SMAD4-217ENST00000611848 ATP6V0A1Q93050 837 aa9.88□□□□□ -0.83
SMAD4-217ENST00000611848 RNF25Q96BH1 459 aaPredicted RBP9.88□□□□□ -0.83
SMAD4-217ENST00000611848 FAM167AQ96KS9 214 aa9.88□□□□□ -0.83
SMAD4-217ENST00000611848 LBHD1Q9BQE6 289 aaPredicted RBP9.88□□□□□ -0.83
SMAD4-217ENST00000611848 TMEM60Q9H2L4 133 aa9.88□□□□□ -0.83
SMAD4-217ENST00000611848 HIPK3Q9H422 1215 aa9.88□□□□□ -0.83
SMAD4-217ENST00000611848 TTC12Q9H892 705 aaPredicted RBP9.88□□□□□ -0.83
SMAD4-217ENST00000611848 CBX8Q9HC52 389 aa9.88□□□□□ -0.83
SMAD4-217ENST00000611848 SETD4Q9NVD3 440 aa9.88□□□□□ -0.83
SMAD4-217ENST00000611848 TRPC6Q9Y210 931 aa9.88□□□□□ -0.83
SMAD4-217ENST00000611848 IGSF9BQ9UPX0 1349 aa9.88□□□□□ -0.83
SMAD4-217ENST00000611848 EVPLQ92817 2033 aa9.88□□□□□ -0.83
SMAD4-217ENST00000611848 LTBP2Q14767 1821 aa9.87□□□□□ -0.83
SMAD4-217ENST00000611848 LAD1O00515 517 aa9.87□□□□□ -0.83
SMAD4-217ENST00000611848 RIOK3O14730 519 aaKnown RBP9.87□□□□□ -0.83
SMAD4-217ENST00000611848 DKC1O60832 514 aaKnown RBP eCLIP9.87□□□□□ -0.83
SMAD4-217ENST00000611848 KINO60870 393 aaKnown RBP9.87□□□□□ -0.83
SMAD4-217ENST00000611848 PPP6R2O75170 966 aa9.87□□□□□ -0.83
SMAD4-217ENST00000611848 OR52Z1P0C646 297 aa9.87□□□□□ -0.83
SMAD4-217ENST00000611848 INSRRP14616 1297 aa9.87□□□□□ -0.83
SMAD4-217ENST00000611848 CMA1P23946 247 aa9.87□□□□□ -0.83
SMAD4-217ENST00000611848 TXKP42681 527 aa9.87□□□□□ -0.83
SMAD4-217ENST00000611848 ADAM17P78536 824 aa9.87□□□□□ -0.83
SMAD4-217ENST00000611848 SPIRE1Q08AE8 756 aa9.87□□□□□ -0.83
SMAD4-217ENST00000611848 PTK7Q13308 1070 aa9.87□□□□□ -0.83
SMAD4-217ENST00000611848 BFSP2Q13515 415 aa9.87□□□□□ -0.83
SMAD4-217ENST00000611848 EPHA7Q15375 998 aa9.87□□□□□ -0.83
SMAD4-217ENST00000611848 SF3A1Q15459 793 aaKnown RBP9.87□□□□□ -0.83
SMAD4-217ENST00000611848 GRIK4Q16099 956 aa9.87□□□□□ -0.83
SMAD4-217ENST00000611848 MFSD5Q6N075 450 aa9.87□□□□□ -0.83
SMAD4-217ENST00000611848 NOC4LQ9BVI4 516 aaKnown RBP9.87□□□□□ -0.83
SMAD4-217ENST00000611848 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.87□□□□□ -0.83
SMAD4-217ENST00000611848 NRBP2Q9NSY0 501 aa9.87□□□□□ -0.83
SMAD4-217ENST00000611848 PCDHB6Q9Y5E3 794 aa9.87□□□□□ -0.83
SMAD4-217ENST00000611848 FAM237AA0A1B0GTK4 181 aa9.86□□□□□ -0.83
SMAD4-217ENST00000611848 EML1O00423 815 aa9.86□□□□□ -0.83
SMAD4-217ENST00000611848 PITPNM1O00562 1244 aa9.86□□□□□ -0.83
SMAD4-217ENST00000611848 TREHO43280 583 aa9.86□□□□□ -0.83
SMAD4-217ENST00000611848 RPLP2P05387 115 aaKnown RBP9.86□□□□□ -0.83
SMAD4-217ENST00000611848 P4HBP07237 508 aaKnown RBP9.86□□□□□ -0.83
SMAD4-217ENST00000611848 CYP2C9P11712 490 aa9.86□□□□□ -0.83
SMAD4-217ENST00000611848 ATP4AP20648 1035 aa9.86□□□□□ -0.83
SMAD4-217ENST00000611848 MAGEA10P43363 369 aaPredicted RBP9.86□□□□□ -0.83
SMAD4-217ENST00000611848 NDUFA8P51970 172 aa9.86□□□□□ -0.83
SMAD4-217ENST00000611848 PSMC5P62195 406 aa9.86□□□□□ -0.83
SMAD4-217ENST00000611848 ZNF200P98182 395 aaPredicted RBP9.86□□□□□ -0.83
SMAD4-217ENST00000611848 RBL2Q08999 1139 aa9.86□□□□□ -0.83
SMAD4-217ENST00000611848 HIC1Q14526 733 aa9.86□□□□□ -0.83
SMAD4-217ENST00000611848 PTPAQ15257 358 aa9.86□□□□□ -0.83
SMAD4-217ENST00000611848 TMEM266Q2M3C6 531 aa9.86□□□□□ -0.83
SMAD4-217ENST00000611848 ZNF484Q5JVG2 852 aa9.86□□□□□ -0.83
SMAD4-217ENST00000611848 NCAPH2Q6IBW4 605 aa9.86□□□□□ -0.83
SMAD4-217ENST00000611848 TAF2Q6P1X5 1199 aa9.86□□□□□ -0.83
SMAD4-217ENST00000611848 SERINC5Q86VE9 423 aa9.86□□□□□ -0.83
SMAD4-217ENST00000611848 C4orf32Q8N8J7 132 aa9.86□□□□□ -0.83
SMAD4-217ENST00000611848 RETREG2Q8NC44 543 aa9.86□□□□□ -0.83
SMAD4-217ENST00000611848 LMBR1Q8WVP7 490 aa9.86□□□□□ -0.83
SMAD4-217ENST00000611848 BADQ92934 168 aa9.86□□□□□ -0.83
SMAD4-217ENST00000611848 CTAGE1Q96RT6 745 aa9.86□□□□□ -0.83
SMAD4-217ENST00000611848 PPP1R12CQ9BZL4 782 aa9.86□□□□□ -0.83
SMAD4-217ENST00000611848 CEP131Q9UPN4 1083 aa9.86□□□□□ -0.83
SMAD4-217ENST00000611848 COL1A2P08123 1366 aa9.86□□□□□ -0.83
SMAD4-217ENST00000611848 MBLAC1A4D2B0 266 aaPredicted RBP9.85□□□□□ -0.83
SMAD4-217ENST00000611848 TULP1O00294 542 aaPredicted RBP9.85□□□□□ -0.83
SMAD4-217ENST00000611848 ZNF862O60290 1169 aa9.85□□□□□ -0.83
SMAD4-217ENST00000611848 CAND2O75155 1236 aa9.85□□□□□ -0.83
SMAD4-217ENST00000611848 BMP15O95972 392 aa9.85□□□□□ -0.83
SMAD4-217ENST00000611848 OATP04181 439 aa9.85□□□□□ -0.83
SMAD4-217ENST00000611848 PTMAP06454 111 aaKnown RBP9.85□□□□□ -0.83
SMAD4-217ENST00000611848 ITGB8P26012 769 aa9.85□□□□□ -0.83
SMAD4-217ENST00000611848 BMP8BP34820 402 aa9.85□□□□□ -0.83
SMAD4-217ENST00000611848 PRPHP41219 470 aa9.85□□□□□ -0.83
SMAD4-217ENST00000611848 QARSP47897 775 aaKnown RBP9.85□□□□□ -0.83
SMAD4-217ENST00000611848 ZNF165P49910 485 aa9.85□□□□□ -0.83
SMAD4-217ENST00000611848 MDM2Q00987 491 aaPredicted RBP9.85□□□□□ -0.83
SMAD4-217ENST00000611848 PRKCEQ02156 737 aa9.85□□□□□ -0.83
SMAD4-217ENST00000611848 PTGDRQ13258 359 aa9.85□□□□□ -0.83
SMAD4-217ENST00000611848 STX1AQ16623 288 aa9.85□□□□□ -0.83
SMAD4-217ENST00000611848 XKR3Q5GH77 459 aa9.85□□□□□ -0.83
SMAD4-217ENST00000611848 LUZP1Q86V48 1076 aa9.85□□□□□ -0.83
SMAD4-217ENST00000611848 TMEM199Q8N511 208 aa9.85□□□□□ -0.83
SMAD4-217ENST00000611848 NEK9Q8TD19 979 aa9.85□□□□□ -0.83
SMAD4-217ENST00000611848 GDF15Q99988 308 aa9.85□□□□□ -0.83
SMAD4-217ENST00000611848 RAB34Q9BZG1 259 aa9.85□□□□□ -0.83
SMAD4-217ENST00000611848 TUBE1Q9UJT0 475 aa9.85□□□□□ -0.83
SMAD4-217ENST00000611848 STK24Q9Y6E0 443 aa9.85□□□□□ -0.83
SMAD4-217ENST00000611848 TRIOBPQ9H2D6 2365 aa9.85□□□□□ -0.83
SMAD4-217ENST00000611848 A0A1B0GVL5 298 aa9.85□□□□□ -0.83
SMAD4-217ENST00000611848 GTPBP6O43824 516 aaPredicted RBP9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms