RNA–Protein interactions for RNA: ENST00000607187.1

CTSA-215, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 509 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-215ENST00000607187 RPAINQ86UA6 219 aa11.29□□□□□ -0.6
CTSA-215ENST00000607187 SMAP1Q8IYB5 467 aaPredicted RBP11.29□□□□□ -0.6
CTSA-215ENST00000607187 SLC5A5Q92911 643 aa11.29□□□□□ -0.6
CTSA-215ENST00000607187 TNPO1Q92973 898 aaKnown RBP11.29□□□□□ -0.6
CTSA-215ENST00000607187 GLMNQ92990 594 aa11.29□□□□□ -0.6
CTSA-215ENST00000607187 RIT2Q99578 217 aa11.29□□□□□ -0.6
CTSA-215ENST00000607187 FTOQ9C0B1 505 aaKnown RBP eCLIP11.29□□□□□ -0.6
CTSA-215ENST00000607187 SLC4A7Q9Y6M7 1214 aa11.29□□□□□ -0.6
CTSA-215ENST00000607187 TMEM265A0A087WTH1 108 aa11.28□□□□□ -0.6
CTSA-215ENST00000607187 CCDC194A0A1B0GVG4 234 aa11.28□□□□□ -0.6
CTSA-215ENST00000607187 POTEB3A0JP26 581 aa11.28□□□□□ -0.6
CTSA-215ENST00000607187 RRN3P2A6NIE6 340 aa11.28□□□□□ -0.6
CTSA-215ENST00000607187 ZBBXA8MT70 800 aa11.28□□□□□ -0.6
CTSA-215ENST00000607187 BACH1O14867 736 aa11.28□□□□□ -0.6
CTSA-215ENST00000607187 BAIAP3O94812 1187 aa11.28□□□□□ -0.6
CTSA-215ENST00000607187 FOSBP53539 338 aa11.28□□□□□ -0.6
CTSA-215ENST00000607187 RABEP1Q15276 862 aa11.28□□□□□ -0.6
CTSA-215ENST00000607187 FAM26DQ5JW98 314 aa11.28□□□□□ -0.6
CTSA-215ENST00000607187 FAM160B1Q5W0V3 765 aa11.28□□□□□ -0.6
CTSA-215ENST00000607187 SWSAP1Q6NVH7 229 aa11.28□□□□□ -0.6
CTSA-215ENST00000607187 POTEBQ6S5H4 581 aa11.28□□□□□ -0.6
CTSA-215ENST00000607187 RUFY4Q6ZNE9 571 aa11.28□□□□□ -0.6
CTSA-215ENST00000607187 CCDC60Q8IWA6 550 aaPredicted RBP11.28□□□□□ -0.6
CTSA-215ENST00000607187 TNFRSF25Q93038 417 aa11.28□□□□□ -0.6
CTSA-215ENST00000607187 ZSCAN31Q96LW9 406 aaPredicted RBP11.28□□□□□ -0.6
CTSA-215ENST00000607187 LLPHQ9BRT6 129 aaKnown RBP11.28□□□□□ -0.6
CTSA-215ENST00000607187 PBX4Q9BYU1 374 aa11.28□□□□□ -0.6
CTSA-215ENST00000607187 TTYH1Q9H313 450 aaPredicted RBP11.28□□□□□ -0.6
CTSA-215ENST00000607187 SEMA6BQ9H3T3 888 aa11.28□□□□□ -0.6
CTSA-215ENST00000607187 UPF2Q9HAU5 1272 aaKnown RBP11.28□□□□□ -0.6
CTSA-215ENST00000607187 ZNF302Q9NR11 478 aa11.28□□□□□ -0.6
CTSA-215ENST00000607187 SH2B1Q9NRF2 756 aaPredicted RBP11.28□□□□□ -0.6
CTSA-215ENST00000607187 TUBE1Q9UJT0 475 aa11.28□□□□□ -0.6
CTSA-215ENST00000607187 PCDHA10Q9Y5I2 948 aa11.28□□□□□ -0.6
CTSA-215ENST00000607187 MAFBQ9Y5Q3 323 aaPredicted RBP11.28□□□□□ -0.6
CTSA-215ENST00000607187 REV3LO60673 3130 aa11.27□□□□□ -0.6
CTSA-215ENST00000607187 WDR64B1ANS9 1081 aa11.27□□□□□ -0.61
CTSA-215ENST00000607187 HBP1O60381 514 aa11.27□□□□□ -0.61
CTSA-215ENST00000607187 GAS7O60861 476 aa11.27□□□□□ -0.61
CTSA-215ENST00000607187 PSMD10O75832 226 aa11.27□□□□□ -0.61
CTSA-215ENST00000607187 MMP1P03956 469 aa11.27□□□□□ -0.61
CTSA-215ENST00000607187 PSAPP07602 524 aa11.27□□□□□ -0.61
CTSA-215ENST00000607187 ATP2A2P16615 1042 aaKnown RBP11.27□□□□□ -0.61
CTSA-215ENST00000607187 ATP4AP20648 1035 aa11.27□□□□□ -0.61
CTSA-215ENST00000607187 KRT2P35908 639 aa11.27□□□□□ -0.61
CTSA-215ENST00000607187 PBX2P40425 430 aa11.27□□□□□ -0.61
CTSA-215ENST00000607187 IGBP1P78318 339 aa11.27□□□□□ -0.61
CTSA-215ENST00000607187 RAB30Q15771 203 aa11.27□□□□□ -0.61
CTSA-215ENST00000607187 TCTN1Q2MV58 587 aa11.27□□□□□ -0.61
CTSA-215ENST00000607187 LETM2Q2VYF4 491 aa11.27□□□□□ -0.61
CTSA-215ENST00000607187 EARS2Q5JPH6 523 aaKnown RBP11.27□□□□□ -0.61
CTSA-215ENST00000607187 LRCH2Q5VUJ6 765 aa11.27□□□□□ -0.61
CTSA-215ENST00000607187 PPP4R3AQ6IN85 833 aa11.27□□□□□ -0.61
CTSA-215ENST00000607187 PDXDC2PQ6P474 469 aa11.27□□□□□ -0.61
CTSA-215ENST00000607187 CNKSR3Q6P9H4 555 aa11.27□□□□□ -0.61
CTSA-215ENST00000607187 PIK3AP1Q6ZUJ8 805 aa11.27□□□□□ -0.61
CTSA-215ENST00000607187 NEK8Q86SG6 692 aa11.27□□□□□ -0.61
CTSA-215ENST00000607187 CCDC83Q8IWF9 413 aa11.27□□□□□ -0.61
CTSA-215ENST00000607187 ETNPPLQ8TBG4 499 aa11.27□□□□□ -0.61
CTSA-215ENST00000607187 PHOSPHO2Q8TCD6 241 aa11.27□□□□□ -0.61
CTSA-215ENST00000607187 ATP8B4Q8TF62 1192 aa11.27□□□□□ -0.61
CTSA-215ENST00000607187 GJA10Q969M2 543 aa11.27□□□□□ -0.61
CTSA-215ENST00000607187 TIFAQ96CG3 184 aa11.27□□□□□ -0.61
CTSA-215ENST00000607187 FAM161BQ96MY7 647 aa11.27□□□□□ -0.61
CTSA-215ENST00000607187 SLC9A7Q96T83 725 aa11.27□□□□□ -0.61
CTSA-215ENST00000607187 BRMS1Q9HCU9 246 aa11.27□□□□□ -0.61
CTSA-215ENST00000607187 PRM3Q9NNZ6 103 aa11.27□□□□□ -0.61
CTSA-215ENST00000607187 DDX25Q9UHL0 483 aaKnown RBP11.27□□□□□ -0.61
CTSA-215ENST00000607187 TCEAL9Q9UHQ7 104 aa11.27□□□□□ -0.61
CTSA-215ENST00000607187 ABHD14A-ACY1A0A1B0GW23 586 aa11.26□□□□□ -0.61
CTSA-215ENST00000607187 ZBTB42B2RXF5 422 aa11.26□□□□□ -0.61
CTSA-215ENST00000607187 SLC37A4O43826 429 aa11.26□□□□□ -0.61
CTSA-215ENST00000607187 CHRNA1P02708 482 aa11.26□□□□□ -0.61
CTSA-215ENST00000607187 RPLP2P05387 115 aaKnown RBP11.26□□□□□ -0.61
CTSA-215ENST00000607187 CTSHP09668 335 aa11.26□□□□□ -0.61
CTSA-215ENST00000607187 GCFC2P16383 781 aaKnown RBP11.26□□□□□ -0.61
CTSA-215ENST00000607187 SFNP31947 248 aa11.26□□□□□ -0.61
CTSA-215ENST00000607187 NR5A1Q13285 461 aa11.26□□□□□ -0.61
CTSA-215ENST00000607187 CSPP1Q1MSJ5 1256 aa11.26□□□□□ -0.61
CTSA-215ENST00000607187 PLEKHG4Q58EX7 1191 aa11.26□□□□□ -0.61
CTSA-215ENST00000607187 KRT40Q6A162 431 aa11.26□□□□□ -0.61
CTSA-215ENST00000607187 B3GNT9Q6UX72 402 aa11.26□□□□□ -0.61
CTSA-215ENST00000607187 RSPH3Q86UC2 560 aa11.26□□□□□ -0.61
CTSA-215ENST00000607187 RDM1Q8NG50 284 aa11.26□□□□□ -0.61
CTSA-215ENST00000607187 TRAPPC12Q8WVT3 735 aa11.26□□□□□ -0.61
CTSA-215ENST00000607187 DNAJB3Q8WWF6 145 aa11.26□□□□□ -0.61
CTSA-215ENST00000607187 TBC1D32Q96NH3 1257 aa11.26□□□□□ -0.61
CTSA-215ENST00000607187 GUCD1Q96NT3 240 aa11.26□□□□□ -0.61
CTSA-215ENST00000607187 TEKT3Q9BXF9 490 aa11.26□□□□□ -0.61
CTSA-215ENST00000607187 OSBPL7Q9BZF2 842 aa11.26□□□□□ -0.61
CTSA-215ENST00000607187 UNC45AQ9H3U1 944 aa11.26□□□□□ -0.61
CTSA-215ENST00000607187 ZNF576Q9H609 170 aa11.26□□□□□ -0.61
CTSA-215ENST00000607187 KCNMB3Q9NPA1 279 aa11.26□□□□□ -0.61
CTSA-215ENST00000607187 DISC1Q9NRI5 854 aa11.26□□□□□ -0.61
CTSA-215ENST00000607187 GABBR1Q9UBS5 961 aa11.26□□□□□ -0.61
CTSA-215ENST00000607187 SAMM50Q9Y512 469 aa11.26□□□□□ -0.61
CTSA-215ENST00000607187 PCDHA2Q9Y5H9 948 aa11.26□□□□□ -0.61
CTSA-215ENST00000607187 IGSF9BQ9UPX0 1349 aa11.26□□□□□ -0.61
CTSA-215ENST00000607187 COL1A2P08123 1366 aa11.26□□□□□ -0.61
CTSA-215ENST00000607187 FAM205CA6NFA0 338 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms