RNA–Protein interactions for RNA: ENST00000605895.5

RER1-209, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RER1, Length 3,044 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-209ENST00000605895 POP1Q99575 1024 aaKnown RBP16.75■□□□□ 0.27
RER1-209ENST00000605895 MKNK2Q9HBH9 465 aa16.75■□□□□ 0.27
RER1-209ENST00000605895 STXBP3O00186 592 aa16.75■□□□□ 0.27
RER1-209ENST00000605895 KIF3CO14782 793 aa16.75■□□□□ 0.27
RER1-209ENST00000605895 FGFR1OPO95684 399 aaKnown RBP16.75■□□□□ 0.27
RER1-209ENST00000605895 ATP4AP20648 1035 aa16.75■□□□□ 0.27
RER1-209ENST00000605895 MXRA7P84157 204 aa16.75■□□□□ 0.27
RER1-209ENST00000605895 TRIM28Q13263 835 aaKnown RBP16.75■□□□□ 0.27
RER1-209ENST00000605895 ZNF268Q14587 947 aaPredicted RBP16.75■□□□□ 0.27
RER1-209ENST00000605895 NONOQ15233 471 aaKnown RBP eCLIP16.75■□□□□ 0.273e-7■■■■□ 21.6
RER1-209ENST00000605895 HERC4Q5GLZ8 1057 aaPredicted RBP16.75■□□□□ 0.27
RER1-209ENST00000605895 LRRC57Q8N9N7 239 aa16.75■□□□□ 0.27
RER1-209ENST00000605895 PBKQ96KB5 322 aa16.75■□□□□ 0.27
RER1-209ENST00000605895 PPP1R12CQ9BZL4 782 aa16.75■□□□□ 0.27
RER1-209ENST00000605895 DCP1AQ9NPI6 582 aaPredicted RBP16.75■□□□□ 0.27
RER1-209ENST00000605895 SAP30BPQ9UHR5 308 aaKnown RBP16.75■□□□□ 0.27
RER1-209ENST00000605895 E9PMD0 336 aa16.75■□□□□ 0.27
RER1-209ENST00000605895 SNX3O60493 162 aa16.75■□□□□ 0.27
RER1-209ENST00000605895 PRDX5P30044 214 aa16.75■□□□□ 0.27
RER1-209ENST00000605895 PSMD2Q13200 908 aa16.75■□□□□ 0.27
RER1-209ENST00000605895 GUF1Q8N442 669 aaKnown RBP16.75■□□□□ 0.27
RER1-209ENST00000605895 C3orf20Q8ND61 904 aa16.75■□□□□ 0.27
RER1-209ENST00000605895 RBM46Q8TBY0 533 aaKnown RBP16.75■□□□□ 0.27
RER1-209ENST00000605895 ACTRT1Q8TDG2 376 aa16.75■□□□□ 0.27
RER1-209ENST00000605895 FER1L4A9Z1Z3 1794 aa16.75■□□□□ 0.27
RER1-209ENST00000605895 SCN11AQ9UI33 1791 aa16.74■□□□□ 0.27
RER1-209ENST00000605895 MYL1P05976 194 aa16.74■□□□□ 0.27
RER1-209ENST00000605895 COPS2P61201 443 aa16.74■□□□□ 0.27
RER1-209ENST00000605895 ADCY2Q08462 1091 aa16.74■□□□□ 0.27
RER1-209ENST00000605895 COASYQ13057 564 aa16.74■□□□□ 0.27
RER1-209ENST00000605895 ZNF449Q6P9G9 518 aa16.74■□□□□ 0.27
RER1-209ENST00000605895 CCDC24Q8N4L8 307 aa16.74■□□□□ 0.27
RER1-209ENST00000605895 COA7Q96BR5 231 aa16.74■□□□□ 0.27
RER1-209ENST00000605895 BATF3Q9NR55 127 aa16.74■□□□□ 0.27
RER1-209ENST00000605895 AFF2P51816 1311 aa16.74■□□□□ 0.27
RER1-209ENST00000605895 SRRM3A6NNA2 597 aaPredicted RBP16.74■□□□□ 0.27
RER1-209ENST00000605895 SNUPNO95149 360 aaKnown RBP16.74■□□□□ 0.27
RER1-209ENST00000605895 STARD3NLO95772 234 aa16.74■□□□□ 0.27
RER1-209ENST00000605895 MMP13P45452 471 aa16.74■□□□□ 0.27
RER1-209ENST00000605895 RAD23BP54727 409 aa16.74■□□□□ 0.27
RER1-209ENST00000605895 LACTBP83111 547 aaPredicted RBP16.74■□□□□ 0.27
RER1-209ENST00000605895 ATP11AP98196 1134 aa16.74■□□□□ 0.27
RER1-209ENST00000605895 CALCRLQ16602 461 aa16.74■□□□□ 0.27
RER1-209ENST00000605895 NEK8Q86SG6 692 aa16.74■□□□□ 0.27
RER1-209ENST00000605895 GLYCTKQ8IVS8 523 aa16.74■□□□□ 0.27
RER1-209ENST00000605895 NAF1Q96HR8 494 aaKnown RBP16.74■□□□□ 0.27
RER1-209ENST00000605895 ETAA1Q9NY74 926 aa16.74■□□□□ 0.27
RER1-209ENST00000605895 ZFATQ9P243 1243 aa16.74■□□□□ 0.27
RER1-209ENST00000605895 MAD2L2Q9UI95 211 aa16.74■□□□□ 0.27
RER1-209ENST00000605895 USP15Q9Y4E8 981 aaPredicted RBP16.74■□□□□ 0.27
RER1-209ENST00000605895 MYH4Q9Y623 1939 aa16.73■□□□□ 0.27
RER1-209ENST00000605895 KLRF2D3W0D1 207 aa16.73■□□□□ 0.27
RER1-209ENST00000605895 KRT18P05783 430 aaKnown RBP16.73■□□□□ 0.27
RER1-209ENST00000605895 POLE2P56282 527 aa16.73■□□□□ 0.27
RER1-209ENST00000605895 RBBP5Q15291 538 aaKnown RBP16.73■□□□□ 0.27
RER1-209ENST00000605895 DCAF12L1Q5VU92 463 aa16.73■□□□□ 0.27
RER1-209ENST00000605895 CRELD2Q6UXH1 353 aaPredicted RBP16.73■□□□□ 0.27
RER1-209ENST00000605895 BARGINQ6ZT62 677 aa16.73■□□□□ 0.27
RER1-209ENST00000605895 PIGBQ92521 554 aa16.73■□□□□ 0.27
RER1-209ENST00000605895 TSC22D3Q99576 134 aa16.73■□□□□ 0.27
RER1-209ENST00000605895 ANAPC4Q9UJX5 808 aa16.73■□□□□ 0.27
RER1-209ENST00000605895 ASAP2O43150 1006 aa16.73■□□□□ 0.27
RER1-209ENST00000605895 TNNI2P48788 182 aa16.73■□□□□ 0.27
RER1-209ENST00000605895 FAM26FQ5R3K3 315 aa16.73■□□□□ 0.27
RER1-209ENST00000605895 IRF2BP2Q7Z5L9 587 aa16.73■□□□□ 0.27
RER1-209ENST00000605895 MRRFQ96E11 262 aaKnown RBP16.73■□□□□ 0.27
RER1-209ENST00000605895 PWWP2AQ96N64 755 aa16.73■□□□□ 0.27
RER1-209ENST00000605895 PABPC3Q9H361 631 aaKnown RBP16.73■□□□□ 0.27
RER1-209ENST00000605895 ANKRD63C9JTQ0 380 aa16.72■□□□□ 0.27
RER1-209ENST00000605895 M0R2N6 131 aa16.72■□□□□ 0.27
RER1-209ENST00000605895 RASGRF2O14827 1237 aa16.72■□□□□ 0.27
RER1-209ENST00000605895 H2AFZP0C0S5 128 aa16.72■□□□□ 0.27
RER1-209ENST00000605895 CCND1P24385 295 aa16.72■□□□□ 0.27
RER1-209ENST00000605895 VPS41P49754 854 aa16.72■□□□□ 0.27
RER1-209ENST00000605895 TRIP13Q15645 432 aaPredicted RBP16.72■□□□□ 0.27
RER1-209ENST00000605895 CNGA2Q16280 664 aa16.72■□□□□ 0.27
RER1-209ENST00000605895 RNF220Q5VTB9 566 aa16.72■□□□□ 0.27
RER1-209ENST00000605895 H2AFVQ71UI9 128 aa16.72■□□□□ 0.27
RER1-209ENST00000605895 KCNMB3Q9NPA1 279 aa16.72■□□□□ 0.27
RER1-209ENST00000605895 FAM114A2Q9NRY5 505 aa16.72■□□□□ 0.27
RER1-209ENST00000605895 IGSF9BQ9UPX0 1349 aa16.72■□□□□ 0.27
RER1-209ENST00000605895 TMEM120BA0PK00 339 aa16.72■□□□□ 0.27
RER1-209ENST00000605895 CCDC169A6NNP5 214 aa16.72■□□□□ 0.27
RER1-209ENST00000605895 CLIC2O15247 247 aa16.72■□□□□ 0.27
RER1-209ENST00000605895 UCHL3P15374 230 aa16.72■□□□□ 0.27
RER1-209ENST00000605895 TARSP26639 723 aaKnown RBP16.72■□□□□ 0.27
RER1-209ENST00000605895 MARCKSL1P49006 195 aa16.72■□□□□ 0.27
RER1-209ENST00000605895 GALCP54803 685 aa16.72■□□□□ 0.27
RER1-209ENST00000605895 LRRC63Q05C16 580 aa16.72■□□□□ 0.27
RER1-209ENST00000605895 NT5DC3Q86UY8 548 aa16.72■□□□□ 0.27
RER1-209ENST00000605895 P3H4Q92791 437 aa16.72■□□□□ 0.27
RER1-209ENST00000605895 AMFRQ9UKV5 643 aa16.72■□□□□ 0.27
RER1-209ENST00000605895 CFAP73A6NFT4 308 aa16.72■□□□□ 0.27
RER1-209ENST00000605895 PPFIA2O75334 1257 aa16.72■□□□□ 0.27
RER1-209ENST00000605895 EIF6P56537 245 aaKnown RBP16.72■□□□□ 0.27
RER1-209ENST00000605895 MECOMQ03112 1051 aa16.72■□□□□ 0.27
RER1-209ENST00000605895 BLMHQ13867 455 aa16.72■□□□□ 0.27
RER1-209ENST00000605895 ITIH4Q14624 930 aa16.72■□□□□ 0.27
RER1-209ENST00000605895 SLC30A9Q6PML9 568 aa16.72■□□□□ 0.27
RER1-209ENST00000605895 JAMLQ86YT9 394 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms