RNA–Protein interactions for RNA: ENST00000604967.1

TUBE1-210, Transcript of tubulin epsilon 1, humanhuman

TSL 5

Gene TUBE1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-210ENST00000604967 MMP1P03956 469 aa12.06□□□□□ -0.48
TUBE1-210ENST00000604967 PSAPP07602 524 aa12.06□□□□□ -0.48
TUBE1-210ENST00000604967 KCNJ6P48051 423 aa12.06□□□□□ -0.48
TUBE1-210ENST00000604967 SLC26A2P50443 739 aa12.06□□□□□ -0.48
TUBE1-210ENST00000604967 CLCN3P51790 818 aa12.06□□□□□ -0.48
TUBE1-210ENST00000604967 PRKCEQ02156 737 aa12.06□□□□□ -0.48
TUBE1-210ENST00000604967 TARBP2Q15633 366 aaKnown RBP12.06□□□□□ -0.48
TUBE1-210ENST00000604967 TMEM266Q2M3C6 531 aa12.06□□□□□ -0.48
TUBE1-210ENST00000604967 MOXD1Q6UVY6 613 aa12.06□□□□□ -0.48
TUBE1-210ENST00000604967 SMAP1Q8IYB5 467 aaPredicted RBP12.06□□□□□ -0.48
TUBE1-210ENST00000604967 SP7Q8TDD2 431 aaPredicted RBP12.06□□□□□ -0.48
TUBE1-210ENST00000604967 SEPT8Q92599 483 aa12.06□□□□□ -0.48
TUBE1-210ENST00000604967 TOP1MTQ969P6 601 aa12.06□□□□□ -0.48
TUBE1-210ENST00000604967 ZNF668Q96K58 619 aaPredicted RBP12.06□□□□□ -0.48
TUBE1-210ENST00000604967 DDX25Q9UHL0 483 aaKnown RBP12.06□□□□□ -0.48
TUBE1-210ENST00000604967 LIMCH1Q9UPQ0 1083 aa12.06□□□□□ -0.48
TUBE1-210ENST00000604967 LOXHD1Q8IVV2 1947 aa12.05□□□□□ -0.48
TUBE1-210ENST00000604967 WDR64B1ANS9 1081 aa12.05□□□□□ -0.48
TUBE1-210ENST00000604967 KIF28PB7ZC32 967 aa12.05□□□□□ -0.48
TUBE1-210ENST00000604967 ZBTB39O15060 712 aa12.05□□□□□ -0.48
TUBE1-210ENST00000604967 GPR32O75388 356 aa12.05□□□□□ -0.48
TUBE1-210ENST00000604967 VTNP04004 478 aa12.05□□□□□ -0.48
TUBE1-210ENST00000604967 ZNF484Q5JVG2 852 aa12.05□□□□□ -0.48
TUBE1-210ENST00000604967 FAM160B1Q5W0V3 765 aa12.05□□□□□ -0.48
TUBE1-210ENST00000604967 PPP4R3AQ6IN85 833 aa12.05□□□□□ -0.48
TUBE1-210ENST00000604967 ANO5Q75V66 913 aa12.05□□□□□ -0.48
TUBE1-210ENST00000604967 NEK8Q86SG6 692 aa12.05□□□□□ -0.48
TUBE1-210ENST00000604967 MYOCDQ8IZQ8 938 aa12.05□□□□□ -0.48
TUBE1-210ENST00000604967 LRRC71Q8N4P6 559 aa12.05□□□□□ -0.48
TUBE1-210ENST00000604967 BANK1Q8NDB2 785 aa12.05□□□□□ -0.48
TUBE1-210ENST00000604967 SLC17A8Q8NDX2 589 aa12.05□□□□□ -0.48
TUBE1-210ENST00000604967 BBXQ8WY36 941 aaPredicted RBP12.05□□□□□ -0.48
TUBE1-210ENST00000604967 ARNTL2Q8WYA1 636 aa12.05□□□□□ -0.48
TUBE1-210ENST00000604967 RAD9AQ99638 391 aa12.05□□□□□ -0.48
TUBE1-210ENST00000604967 C17orf80Q9BSJ5 609 aa12.05□□□□□ -0.48
TUBE1-210ENST00000604967 TEKT3Q9BXF9 490 aa12.05□□□□□ -0.48
TUBE1-210ENST00000604967 CELF4Q9BZC1 486 aaKnown RBP12.05□□□□□ -0.48
TUBE1-210ENST00000604967 ADAMTS10Q9H324 1103 aa12.05□□□□□ -0.48
TUBE1-210ENST00000604967 PADI3Q9ULW8 664 aa12.05□□□□□ -0.48
TUBE1-210ENST00000604967 NOC2LQ9Y3T9 749 aaKnown RBP12.05□□□□□ -0.48
TUBE1-210ENST00000604967 TRPV2Q9Y5S1 764 aa12.05□□□□□ -0.48
TUBE1-210ENST00000604967 KDM3AQ9Y4C1 1321 aa12.05□□□□□ -0.48
TUBE1-210ENST00000604967 COL1A2P08123 1366 aa12.05□□□□□ -0.48
TUBE1-210ENST00000604967 PRRC2BQ5JSZ5 2229 aaKnown RBP12.05□□□□□ -0.48
TUBE1-210ENST00000604967 EVPLQ92817 2033 aa12.04□□□□□ -0.48
TUBE1-210ENST00000604967 CCDC194A0A1B0GVG4 234 aa12.04□□□□□ -0.48
TUBE1-210ENST00000604967 CCNT1O60563 726 aaKnown RBP12.04□□□□□ -0.48
TUBE1-210ENST00000604967 UPP2O95045 317 aa12.04□□□□□ -0.48
TUBE1-210ENST00000604967 OATP04181 439 aa12.04□□□□□ -0.48
TUBE1-210ENST00000604967 KRT2P35908 639 aa12.04□□□□□ -0.48
TUBE1-210ENST00000604967 GATMP50440 423 aa12.04□□□□□ -0.48
TUBE1-210ENST00000604967 GRB10Q13322 594 aa12.04□□□□□ -0.48
TUBE1-210ENST00000604967 PPP2R5CQ13362 524 aa12.04□□□□□ -0.48
TUBE1-210ENST00000604967 CCDC85BQ15834 202 aaPredicted RBP12.04□□□□□ -0.48
TUBE1-210ENST00000604967 KIZQ2M2Z5 673 aa12.04□□□□□ -0.48
TUBE1-210ENST00000604967 PLA2G4FQ68DD2 849 aa12.04□□□□□ -0.48
TUBE1-210ENST00000604967 TSHZ1Q6ZSZ6 1077 aa12.04□□□□□ -0.48
TUBE1-210ENST00000604967 MIER3Q7Z3K6 550 aa12.04□□□□□ -0.48
TUBE1-210ENST00000604967 DIS3L2Q8IYB7 885 aaKnown RBP12.04□□□□□ -0.48
TUBE1-210ENST00000604967 GDPD5Q8WTR4 605 aa12.04□□□□□ -0.48
TUBE1-210ENST00000604967 TMEM60Q9H2L4 133 aa12.04□□□□□ -0.48
TUBE1-210ENST00000604967 SUGCTQ9HAC7 445 aa12.04□□□□□ -0.48
TUBE1-210ENST00000604967 ERVK-5Q9HDB9 667 aa12.04□□□□□ -0.48
TUBE1-210ENST00000604967 RGL1Q9NZL6 768 aa12.04□□□□□ -0.48
TUBE1-210ENST00000604967 MTUS1Q9ULD2 1270 aa12.04□□□□□ -0.48
TUBE1-210ENST00000604967 SAMM50Q9Y512 469 aa12.04□□□□□ -0.48
TUBE1-210ENST00000604967 MTCH2Q9Y6C9 303 aa12.04□□□□□ -0.48
TUBE1-210ENST00000604967 ERVK-21P61565 698 aa12.03□□□□□ -0.48
TUBE1-210ENST00000604967 FAM228AQ86W67 206 aa12.03□□□□□ -0.48
TUBE1-210ENST00000604967 CKAP2LQ8IYA6 745 aa12.03□□□□□ -0.48
TUBE1-210ENST00000604967 PPM1EQ8WY54 764 aa12.03□□□□□ -0.48
TUBE1-210ENST00000604967 OSMRQ99650 979 aa12.03□□□□□ -0.48
TUBE1-210ENST00000604967 NIFKQ9BYG3 293 aaKnown RBP12.03□□□□□ -0.48
TUBE1-210ENST00000604967 MYH9P35579 1960 aaKnown RBP12.03□□□□□ -0.48
TUBE1-210ENST00000604967 TTC3P53804 2025 aa12.03□□□□□ -0.48
TUBE1-210ENST00000604967 A0A087WWV3 80 aa12.02□□□□□ -0.49
TUBE1-210ENST00000604967 IGKV6-21A0A0C4DH24 114 aa12.02□□□□□ -0.49
TUBE1-210ENST00000604967 EFCAB14O75071 495 aa12.02□□□□□ -0.49
TUBE1-210ENST00000604967 CSDE1O75534 798 aaKnown RBP12.02□□□□□ -0.49
TUBE1-210ENST00000604967 AMHP03971 560 aa12.02□□□□□ -0.49
TUBE1-210ENST00000604967 POU3F3P20264 500 aaPredicted RBP12.02□□□□□ -0.49
TUBE1-210ENST00000604967 IGFBP4P22692 258 aa12.02□□□□□ -0.49
TUBE1-210ENST00000604967 SFNP31947 248 aa12.02□□□□□ -0.49
TUBE1-210ENST00000604967 JAK3P52333 1124 aa12.02□□□□□ -0.49
TUBE1-210ENST00000604967 NPEPPSP55786 919 aa12.02□□□□□ -0.49
TUBE1-210ENST00000604967 DSC3Q14574 896 aa12.02□□□□□ -0.49
TUBE1-210ENST00000604967 NBR1Q14596 966 aa12.02□□□□□ -0.49
TUBE1-210ENST00000604967 EFCAB12Q6NXP0 572 aa12.02□□□□□ -0.49
TUBE1-210ENST00000604967 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.02□□□□□ -0.49
TUBE1-210ENST00000604967 METTL13Q8N6R0 699 aa12.02□□□□□ -0.49
TUBE1-210ENST00000604967 APBB2Q92870 758 aa12.02□□□□□ -0.49
TUBE1-210ENST00000604967 ZNF689Q96CS4 500 aaPredicted RBP12.02□□□□□ -0.49
TUBE1-210ENST00000604967 TBC1D32Q96NH3 1257 aa12.02□□□□□ -0.49
TUBE1-210ENST00000604967 MTMR9Q96QG7 549 aa12.02□□□□□ -0.49
TUBE1-210ENST00000604967 ZBED2Q9BTP6 218 aa12.02□□□□□ -0.49
TUBE1-210ENST00000604967 TSPYL2Q9H2G4 693 aaPredicted RBP12.02□□□□□ -0.49
TUBE1-210ENST00000604967 HCSTQ9UBK5 93 aa12.02□□□□□ -0.49
TUBE1-210ENST00000604967 GINS2Q9Y248 185 aa12.02□□□□□ -0.49
TUBE1-210ENST00000604967 MUC3AQ02505 3323 aa12.02□□□□□ -0.49
TUBE1-210ENST00000604967 FGFR4P22455 802 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms