RNA–Protein interactions for RNA: ENST00000601372.5

ZNF558-207, Transcript of zinc finger protein 558, humanhuman

APPRIS P1 TSL 2 BASIC

Gene ZNF558, Length 7,032 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-207ENST00000601372 URGCPQ8TCY9 931 aa12.01□□□□□ -0.49
ZNF558-207ENST00000601372 SNX25Q9H3E2 840 aa12.01□□□□□ -0.49
ZNF558-207ENST00000601372 ASIC3Q9UHC3 531 aa12.01□□□□□ -0.49
ZNF558-207ENST00000601372 POTEMA6NI47 508 aa12.01□□□□□ -0.49
ZNF558-207ENST00000601372 SFI1A8K8P3 1242 aa12.01□□□□□ -0.49
ZNF558-207ENST00000601372 NR2F2P24468 414 aa12.01□□□□□ -0.49
ZNF558-207ENST00000601372 PEX3P56589 373 aa12.01□□□□□ -0.49
ZNF558-207ENST00000601372 POTEDQ86YR6 584 aa12.01□□□□□ -0.49
ZNF558-207ENST00000601372 PPP1R14CQ8TAE6 165 aa12.01□□□□□ -0.49
ZNF558-207ENST00000601372 RPGRIP1Q96KN7 1286 aa12.01□□□□□ -0.49
ZNF558-207ENST00000601372 POLD4Q9HCU8 107 aa12.01□□□□□ -0.49
ZNF558-207ENST00000601372 CAPN9O14815 690 aa12.01□□□□□ -0.49
ZNF558-207ENST00000601372 BACE1P56817 501 aa12.01□□□□□ -0.49
ZNF558-207ENST00000601372 GRIN1Q05586 938 aa12.01□□□□□ -0.49
ZNF558-207ENST00000601372 DPF3Q92784 378 aa12.01□□□□□ -0.49
ZNF558-207ENST00000601372 AGBL1Q96MI9 1066 aa12.01□□□□□ -0.49
ZNF558-207ENST00000601372 TRPA1O75762 1119 aa12.01□□□□□ -0.49
ZNF558-207ENST00000601372 DCUN1D2Q6PH85 259 aa12.01□□□□□ -0.49
ZNF558-207ENST00000601372 PLEKHH3Q7Z736 793 aa12.01□□□□□ -0.49
ZNF558-207ENST00000601372 ZNF579Q8NAF0 562 aaKnown RBP12.01□□□□□ -0.49
ZNF558-207ENST00000601372 DYDC2Q96IM9 177 aa12.01□□□□□ -0.49
ZNF558-207ENST00000601372 RPF1Q9H9Y2 349 aaKnown RBP12.01□□□□□ -0.49
ZNF558-207ENST00000601372 POLIQ9UNA4 740 aa12.01□□□□□ -0.49
ZNF558-207ENST00000601372 STAT1P42224 750 aa12.01□□□□□ -0.49
ZNF558-207ENST00000601372 DEFB115Q30KQ5 88 aa12.01□□□□□ -0.49
ZNF558-207ENST00000601372 DACT2Q5SW24 774 aa12.01□□□□□ -0.49
ZNF558-207ENST00000601372 SRBD1Q8N5C6 995 aaKnown RBP12.01□□□□□ -0.49
ZNF558-207ENST00000601372 IRX2Q9BZI1 471 aaPredicted RBP12.01□□□□□ -0.49
ZNF558-207ENST00000601372 EPB41L5Q9HCM4 733 aa12.01□□□□□ -0.49
ZNF558-207ENST00000601372 PTPN22Q9Y2R2 807 aa12.01□□□□□ -0.49
ZNF558-207ENST00000601372 KRT76Q01546 638 aa12□□□□□ -0.49
ZNF558-207ENST00000601372 EXOC3L4Q17RC7 722 aa12□□□□□ -0.49
ZNF558-207ENST00000601372 CCDC63Q8NA47 563 aa12□□□□□ -0.49
ZNF558-207ENST00000601372 RIC8AQ9NPQ8 531 aa12□□□□□ -0.49
ZNF558-207ENST00000601372 SLC9A2Q9UBY0 812 aa12□□□□□ -0.49
ZNF558-207ENST00000601372 K7ERI5 159 aa12□□□□□ -0.49
ZNF558-207ENST00000601372 ACTN4O43707 911 aaKnown RBP12□□□□□ -0.49
ZNF558-207ENST00000601372 DDTLA6NHG4 134 aaPredicted RBP12□□□□□ -0.49
ZNF558-207ENST00000601372 ALDH1A1P00352 501 aa12□□□□□ -0.49
ZNF558-207ENST00000601372 KCNJ6P48051 423 aa12□□□□□ -0.49
ZNF558-207ENST00000601372 KRT71Q3SY84 523 aa12□□□□□ -0.49
ZNF558-207ENST00000601372 KATNAL1Q9BW62 490 aa12□□□□□ -0.49
ZNF558-207ENST00000601372 PARVGQ9HBI0 331 aa12□□□□□ -0.49
ZNF558-207ENST00000601372 AFDNP55196 1824 aaKnown RBP12□□□□□ -0.49
ZNF558-207ENST00000601372 GH1P01241 217 aa12□□□□□ -0.49
ZNF558-207ENST00000601372 IPO5O00410 1097 aaKnown RBP12□□□□□ -0.49
ZNF558-207ENST00000601372 PDHBP11177 359 aa12□□□□□ -0.49
ZNF558-207ENST00000601372 CCT5P48643 541 aa12□□□□□ -0.49
ZNF558-207ENST00000601372 PPP4CP60510 307 aa12□□□□□ -0.49
ZNF558-207ENST00000601372 MAN2A1Q16706 1144 aa12□□□□□ -0.49
ZNF558-207ENST00000601372 RNF180Q86T96 592 aa12□□□□□ -0.49
ZNF558-207ENST00000601372 ACER1Q8TDN7 264 aa12□□□□□ -0.49
ZNF558-207ENST00000601372 HPS3Q969F9 1004 aa12□□□□□ -0.49
ZNF558-207ENST00000601372 IQCDQ96DY2 449 aa12□□□□□ -0.49
ZNF558-207ENST00000601372 CUEDC2Q9H467 287 aa12□□□□□ -0.49
ZNF558-207ENST00000601372 GINM1Q9NU53 330 aa12□□□□□ -0.49
ZNF558-207ENST00000601372 ELF1P32519 619 aa12□□□□□ -0.49
ZNF558-207ENST00000601372 PHKA2P46019 1235 aa12□□□□□ -0.49
ZNF558-207ENST00000601372 KIF11P52732 1056 aa12□□□□□ -0.49
ZNF558-207ENST00000601372 IQCGQ9H095 443 aaKnown RBP12□□□□□ -0.49
ZNF558-207ENST00000601372 JPH1Q9HDC5 661 aaPredicted RBP12□□□□□ -0.49
ZNF558-207ENST00000601372 STK25O00506 426 aa11.99□□□□□ -0.49
ZNF558-207ENST00000601372 LLGL1Q15334 1064 aa11.99□□□□□ -0.49
ZNF558-207ENST00000601372 DENND2CQ68D51 928 aa11.99□□□□□ -0.49
ZNF558-207ENST00000601372 MAGEF1Q9HAY2 307 aa11.99□□□□□ -0.49
ZNF558-207ENST00000601372 VIL1P09327 827 aaKnown RBP11.99□□□□□ -0.49
ZNF558-207ENST00000601372 MXRA7P84157 204 aa11.99□□□□□ -0.49
ZNF558-207ENST00000601372 GFPT1Q06210 699 aaPredicted RBP11.99□□□□□ -0.49
ZNF558-207ENST00000601372 CASP8Q14790 479 aa11.99□□□□□ -0.49
ZNF558-207ENST00000601372 ELMSAN1Q6PJG2 1045 aa11.99□□□□□ -0.49
ZNF558-207ENST00000601372 DSTYKQ6XUX3 929 aa11.99□□□□□ -0.49
ZNF558-207ENST00000601372 CHST13Q8NET6 341 aa11.99□□□□□ -0.49
ZNF558-207ENST00000601372 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.99□□□□□ -0.49
ZNF558-207ENST00000601372 CTSHP09668 335 aa11.99□□□□□ -0.49
ZNF558-207ENST00000601372 HOXA10P31260 410 aaPredicted RBP11.99□□□□□ -0.49
ZNF558-207ENST00000601372 ANKRD42Q8N9B4 389 aa11.99□□□□□ -0.49
ZNF558-207ENST00000601372 TRIM17Q9Y577 477 aa11.99□□□□□ -0.49
ZNF558-207ENST00000601372 TCP1P17987 556 aaKnown RBP11.99□□□□□ -0.49
ZNF558-207ENST00000601372 CCNE1P24864 410 aa11.99□□□□□ -0.49
ZNF558-207ENST00000601372 LIG3P49916 1009 aa11.99□□□□□ -0.49
ZNF558-207ENST00000601372 TRPM4Q8TD43 1214 aa11.99□□□□□ -0.49
ZNF558-207ENST00000601372 AP1M1Q9BXS5 423 aa11.99□□□□□ -0.49
ZNF558-207ENST00000601372 ZCCHC17Q9NP64 241 aaKnown RBP11.99□□□□□ -0.49
ZNF558-207ENST00000601372 NCK2O43639 380 aa11.99□□□□□ -0.49
ZNF558-207ENST00000601372 FGFR2P21802 821 aa11.99□□□□□ -0.49
ZNF558-207ENST00000601372 GCLCP48506 637 aaPredicted RBP11.99□□□□□ -0.49
ZNF558-207ENST00000601372 CC2D1AQ6P1N0 951 aaPredicted RBP11.99□□□□□ -0.49
ZNF558-207ENST00000601372 USP49Q70CQ1 688 aa11.99□□□□□ -0.49
ZNF558-207ENST00000601372 PHLDB2Q86SQ0 1253 aa11.99□□□□□ -0.49
ZNF558-207ENST00000601372 BHMT2Q9H2M3 363 aa11.99□□□□□ -0.49
ZNF558-207ENST00000601372 HESX1Q9UBX0 185 aa11.99□□□□□ -0.49
ZNF558-207ENST00000601372 N4BP1O75113 896 aaKnown RBP11.98□□□□□ -0.49
ZNF558-207ENST00000601372 GFPT2O94808 682 aa11.98□□□□□ -0.49
ZNF558-207ENST00000601372 SFNP31947 248 aa11.98□□□□□ -0.49
ZNF558-207ENST00000601372 ABCD1P33897 745 aa11.98□□□□□ -0.49
ZNF558-207ENST00000601372 LACTBP83111 547 aaPredicted RBP11.98□□□□□ -0.49
ZNF558-207ENST00000601372 TERF2Q15554 542 aa11.98□□□□□ -0.49
ZNF558-207ENST00000601372 BCAS4Q8TDM0 211 aa11.98□□□□□ -0.49
ZNF558-207ENST00000601372 MSTO1Q9BUK6 570 aa11.98□□□□□ -0.49
ZNF558-207ENST00000601372 NDST4Q9H3R1 872 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms