RNA–Protein interactions for RNA: ENST00000600031.1

VRK3-218, Transcript of vaccinia related kinase 3, humanhuman

Gene VRK3, Length 2,110 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-218ENST00000600031 MAML3Q96JK9 1138 aa16.81■□□□□ 0.28
VRK3-218ENST00000600031 SH2D3AQ9BRG2 576 aa16.81■□□□□ 0.28
VRK3-218ENST00000600031 FGFBP2Q9BYJ0 223 aa16.81■□□□□ 0.28
VRK3-218ENST00000600031 GTPBP4Q9BZE4 634 aaKnown RBP16.81■□□□□ 0.28
VRK3-218ENST00000600031 TBC1D7Q9P0N9 293 aa16.81■□□□□ 0.28
VRK3-218ENST00000600031 DBR1Q9UK59 544 aaKnown RBP16.81■□□□□ 0.28
VRK3-218ENST00000600031 LOXHD1Q8IVV2 1947 aa16.8■□□□□ 0.28
VRK3-218ENST00000600031 TRIM49BA6NDI0 452 aa16.8■□□□□ 0.28
VRK3-218ENST00000600031 STIM1Q13586 685 aa16.8■□□□□ 0.28
VRK3-218ENST00000600031 LRRC41Q15345 812 aa16.8■□□□□ 0.28
VRK3-218ENST00000600031 FAM26FQ5R3K3 315 aa16.8■□□□□ 0.28
VRK3-218ENST00000600031 UTP14CQ5TAP6 766 aaKnown RBP16.8■□□□□ 0.28
VRK3-218ENST00000600031 KCNV1Q6PIU1 500 aa16.8■□□□□ 0.28
VRK3-218ENST00000600031 TMC6Q7Z403 805 aa16.8■□□□□ 0.28
VRK3-218ENST00000600031 DIS3Q9Y2L1 958 aaKnown RBP16.8■□□□□ 0.28
VRK3-218ENST00000600031 GSTTP1A0A1W2PQM5 241 aa16.79■□□□□ 0.28
VRK3-218ENST00000600031 PSMA7O14818 248 aa16.79■□□□□ 0.28
VRK3-218ENST00000600031 AOC2O75106 756 aa16.79■□□□□ 0.28
VRK3-218ENST00000600031 STBD1O95210 358 aa16.79■□□□□ 0.28
VRK3-218ENST00000600031 ZNF18P17022 549 aa16.79■□□□□ 0.28
VRK3-218ENST00000600031 SFPQP23246 707 aaKnown RBP eCLIP16.79■□□□□ 0.28
VRK3-218ENST00000600031 CBX1P83916 185 aa16.79■□□□□ 0.28
VRK3-218ENST00000600031 MORN1Q5T089 497 aa16.79■□□□□ 0.28
VRK3-218ENST00000600031 PADI6Q6TGC4 694 aa16.79■□□□□ 0.28
VRK3-218ENST00000600031 METTL7BQ6UX53 244 aa16.79■□□□□ 0.28
VRK3-218ENST00000600031 MAMDC4Q6UXC1 1216 aa16.79■□□□□ 0.28
VRK3-218ENST00000600031 ATP6V0A1Q93050 837 aa16.79■□□□□ 0.28
VRK3-218ENST00000600031 DHTKD1Q96HY7 919 aaPredicted RBP16.79■□□□□ 0.28
VRK3-218ENST00000600031 MLXIPQ9HAP2 919 aa16.79■□□□□ 0.28
VRK3-218ENST00000600031 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.79■□□□□ 0.28
VRK3-218ENST00000600031 SFI1A8K8P3 1242 aa16.79■□□□□ 0.28
VRK3-218ENST00000600031 BACH1O14867 736 aa16.79■□□□□ 0.28
VRK3-218ENST00000600031 CBFA2T2O43439 604 aa16.79■□□□□ 0.28
VRK3-218ENST00000600031 CA12O43570 354 aa16.79■□□□□ 0.28
VRK3-218ENST00000600031 SNAI1O95863 264 aaPredicted RBP16.79■□□□□ 0.28
VRK3-218ENST00000600031 DEFB115Q30KQ5 88 aa16.79■□□□□ 0.28
VRK3-218ENST00000600031 CELF3Q5SZQ8 465 aaKnown RBP16.79■□□□□ 0.28
VRK3-218ENST00000600031 PLA2G4FQ68DD2 849 aa16.79■□□□□ 0.28
VRK3-218ENST00000600031 TAPT1Q6NXT6 567 aa16.79■□□□□ 0.28
VRK3-218ENST00000600031 ANO5Q75V66 913 aa16.79■□□□□ 0.28
VRK3-218ENST00000600031 COPS5Q92905 334 aa16.79■□□□□ 0.28
VRK3-218ENST00000600031 KATNBL1Q9H079 304 aa16.79■□□□□ 0.28
VRK3-218ENST00000600031 KCND2Q9NZV8 630 aa16.79■□□□□ 0.28
VRK3-218ENST00000600031 ZNF236Q9UL36 1845 aa16.78■□□□□ 0.28
VRK3-218ENST00000600031 TXNP10599 105 aaKnown RBP16.78■□□□□ 0.28
VRK3-218ENST00000600031 YY1P25490 414 aa16.78■□□□□ 0.28
VRK3-218ENST00000600031 NPEPPSP55786 919 aa16.78■□□□□ 0.28
VRK3-218ENST00000600031 FANCCQ00597 558 aa16.78■□□□□ 0.28
VRK3-218ENST00000600031 NOGQ13253 232 aa16.78■□□□□ 0.28
VRK3-218ENST00000600031 SFR1Q86XK3 245 aa16.78■□□□□ 0.28
VRK3-218ENST00000600031 GUF1Q8N442 669 aaKnown RBP16.78■□□□□ 0.28
VRK3-218ENST00000600031 P2RX5Q93086 422 aa16.78■□□□□ 0.28
VRK3-218ENST00000600031 ERO1AQ96HE7 468 aa16.78■□□□□ 0.28
VRK3-218ENST00000600031 ANKEF1Q9NU02 776 aa16.78■□□□□ 0.28
VRK3-218ENST00000600031 TRMT1Q9NXH9 659 aaKnown RBP16.78■□□□□ 0.28
VRK3-218ENST00000600031 IGSF9BQ9UPX0 1349 aa16.78■□□□□ 0.28
VRK3-218ENST00000600031 IGKV6D-21A0A0A0MT36 114 aa16.78■□□□□ 0.28
VRK3-218ENST00000600031 RASSF10A6NK89 507 aa16.78■□□□□ 0.28
VRK3-218ENST00000600031 CCP110O43303 1012 aa16.78■□□□□ 0.28
VRK3-218ENST00000600031 TBCAO75347 108 aaKnown RBP16.78■□□□□ 0.28
VRK3-218ENST00000600031 ATP4AP20648 1035 aa16.78■□□□□ 0.28
VRK3-218ENST00000600031 CCNE1P24864 410 aa16.78■□□□□ 0.28
VRK3-218ENST00000600031 GUCY2CP25092 1073 aa16.78■□□□□ 0.28
VRK3-218ENST00000600031 PPP1R2P41236 205 aa16.78■□□□□ 0.28
VRK3-218ENST00000600031 MAP2K5Q13163 448 aa16.78■□□□□ 0.28
VRK3-218ENST00000600031 TTLL4Q14679 1199 aa16.78■□□□□ 0.28
VRK3-218ENST00000600031 TTI2Q6NXR4 508 aa16.78■□□□□ 0.28
VRK3-218ENST00000600031 SCFD2Q8WU76 684 aa16.78■□□□□ 0.28
VRK3-218ENST00000600031 CAPNS2Q96L46 248 aa16.78■□□□□ 0.28
VRK3-218ENST00000600031 PCYT2Q99447 389 aa16.78■□□□□ 0.28
VRK3-218ENST00000600031 SEMA6BQ9H3T3 888 aa16.78■□□□□ 0.28
VRK3-218ENST00000600031 VTA1Q9NP79 307 aa16.78■□□□□ 0.28
VRK3-218ENST00000600031 ZNF302Q9NR11 478 aa16.78■□□□□ 0.28
VRK3-218ENST00000600031 CREBZFQ9NS37 354 aa16.78■□□□□ 0.28
VRK3-218ENST00000600031 OGFRQ9NZT2 677 aa16.78■□□□□ 0.28
VRK3-218ENST00000600031 COL4A3BPQ9Y5P4 624 aa16.78■□□□□ 0.28
VRK3-218ENST00000600031 MAFBQ9Y5Q3 323 aaPredicted RBP16.78■□□□□ 0.28
VRK3-218ENST00000600031 MYH9P35579 1960 aaKnown RBP16.78■□□□□ 0.28
VRK3-218ENST00000600031 DKC1O60832 514 aaKnown RBP eCLIP16.77■□□□□ 0.28
VRK3-218ENST00000600031 PRKCEQ02156 737 aa16.77■□□□□ 0.28
VRK3-218ENST00000600031 HSDL1Q3SXM5 330 aa16.77■□□□□ 0.28
VRK3-218ENST00000600031 XKR9Q5GH70 373 aa16.77■□□□□ 0.28
VRK3-218ENST00000600031 ANKRD40Q6AI12 368 aa16.77■□□□□ 0.28
VRK3-218ENST00000600031 ARMCX5Q6P1M9 558 aa16.77■□□□□ 0.28
VRK3-218ENST00000600031 PKNOX2Q96KN3 472 aa16.77■□□□□ 0.28
VRK3-218ENST00000600031 TINF2Q9BSI4 451 aa16.77■□□□□ 0.28
VRK3-218ENST00000600031 USO1O60763 962 aaKnown RBP16.76■□□□□ 0.27
VRK3-218ENST00000600031 FAM13AO94988 1023 aa16.76■□□□□ 0.27
VRK3-218ENST00000600031 CTGFP29279 349 aa16.76■□□□□ 0.27
VRK3-218ENST00000600031 CASP5P51878 434 aa16.76■□□□□ 0.27
VRK3-218ENST00000600031 MAPK7Q13164 816 aa16.76■□□□□ 0.27
VRK3-218ENST00000600031 CDKAL1Q5VV42 579 aa16.76■□□□□ 0.27
VRK3-218ENST00000600031 E4F1Q66K89 784 aaPredicted RBP16.76■□□□□ 0.27
VRK3-218ENST00000600031 CENPPQ6IPU0 288 aa16.76■□□□□ 0.27
VRK3-218ENST00000600031 MAEAQ7L5Y9 396 aa16.76■□□□□ 0.27
VRK3-218ENST00000600031 DHX37Q8IY37 1157 aaKnown RBP16.76■□□□□ 0.27
VRK3-218ENST00000600031 MYOCDQ8IZQ8 938 aa16.76■□□□□ 0.27
VRK3-218ENST00000600031 DAW1Q8N136 415 aa16.76■□□□□ 0.27
VRK3-218ENST00000600031 SEPT1Q8WYJ6 367 aa16.76■□□□□ 0.27
VRK3-218ENST00000600031 DUSP9Q99956 384 aaKnown RBP16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms