RNA–Protein interactions for RNA: ENST00000598159.6

SSBP4-205, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 747 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-205ENST00000598159 STK36Q9NRP7 1315 aa26.01■■□□□ 1.75
SSBP4-205ENST00000598159 NRBP2Q9NSY0 501 aa26.01■■□□□ 1.75
SSBP4-205ENST00000598159 PADI3Q9ULW8 664 aa26.01■■□□□ 1.75
SSBP4-205ENST00000598159 TTC3P53804 2025 aa26■■□□□ 1.75
SSBP4-205ENST00000598159 ZBTB42B2RXF5 422 aa26■■□□□ 1.75
SSBP4-205ENST00000598159 MAGEB2O15479 319 aa26■■□□□ 1.75
SSBP4-205ENST00000598159 JAK3P52333 1124 aa26■■□□□ 1.75
SSBP4-205ENST00000598159 LRCH2Q5VUJ6 765 aa26■■□□□ 1.75
SSBP4-205ENST00000598159 KCNJ14Q9UNX9 436 aa26■■□□□ 1.75
SSBP4-205ENST00000598159 WDR81Q562E7 1941 aa26■■□□□ 1.75
SSBP4-205ENST00000598159 PSMD10O75832 226 aa25.99■■□□□ 1.75
SSBP4-205ENST00000598159 PAK2Q13177 524 aa25.99■■□□□ 1.75
SSBP4-205ENST00000598159 AAK1Q2M2I8 961 aa25.99■■□□□ 1.75
SSBP4-205ENST00000598159 EPC2Q52LR7 807 aa25.99■■□□□ 1.75
SSBP4-205ENST00000598159 ODR4Q5SWX8 454 aa25.99■■□□□ 1.75
SSBP4-205ENST00000598159 TRMT1LQ7Z2T5 733 aaKnown RBP25.99■■□□□ 1.75
SSBP4-205ENST00000598159 RTN4RL1Q86UN2 441 aaPredicted RBP25.99■■□□□ 1.75
SSBP4-205ENST00000598159 RDM1Q8NG50 284 aa25.99■■□□□ 1.75
SSBP4-205ENST00000598159 WASF1Q92558 559 aa25.99■■□□□ 1.75
SSBP4-205ENST00000598159 MBOAT7Q96N66 472 aa25.99■■□□□ 1.75
SSBP4-205ENST00000598159 COG5Q9UP83 839 aa25.99■■□□□ 1.75
SSBP4-205ENST00000598159 C22orf31O95567 290 aa25.98■■□□□ 1.75
SSBP4-205ENST00000598159 TMEM192Q8IY95 271 aa25.98■■□□□ 1.75
SSBP4-205ENST00000598159 FIBCD1Q8N539 461 aa25.98■■□□□ 1.75
SSBP4-205ENST00000598159 TDP2O95551 362 aa25.97■■□□□ 1.75
SSBP4-205ENST00000598159 METTL13Q8N6R0 699 aa25.97■■□□□ 1.75
SSBP4-205ENST00000598159 UNC45AQ9H3U1 944 aa25.97■■□□□ 1.75
SSBP4-205ENST00000598159 ORC3Q9UBD5 711 aaPredicted RBP25.97■■□□□ 1.75
SSBP4-205ENST00000598159 COL4A6Q14031 1691 aa25.96■■□□□ 1.75
SSBP4-205ENST00000598159 CCDC194A0A1B0GVG4 234 aa25.96■■□□□ 1.75
SSBP4-205ENST00000598159 CTDNEP1O95476 244 aa25.96■■□□□ 1.75
SSBP4-205ENST00000598159 TMOD1P28289 359 aa25.96■■□□□ 1.75
SSBP4-205ENST00000598159 INF2Q27J81 1249 aa25.96■■□□□ 1.75
SSBP4-205ENST00000598159 MIER3Q7Z3K6 550 aa25.96■■□□□ 1.75
SSBP4-205ENST00000598159 ZNF710Q8N1W2 664 aa25.96■■□□□ 1.75
SSBP4-205ENST00000598159 IL27Q8NEV9 243 aa25.96■■□□□ 1.75
SSBP4-205ENST00000598159 ZNF689Q96CS4 500 aaPredicted RBP25.96■■□□□ 1.75
SSBP4-205ENST00000598159 CDHR5Q9HBB8 845 aa25.96■■□□□ 1.75
SSBP4-205ENST00000598159 DDX25Q9UHL0 483 aaKnown RBP25.96■■□□□ 1.75
SSBP4-205ENST00000598159 GINS2Q9Y248 185 aa25.96■■□□□ 1.75
SSBP4-205ENST00000598159 TRANK1O15050 2925 aa25.95■■□□□ 1.75
SSBP4-205ENST00000598159 H3BNC9 293 aa25.95■■□□□ 1.74
SSBP4-205ENST00000598159 GPR182O15218 404 aa25.95■■□□□ 1.74
SSBP4-205ENST00000598159 CHMP2AO43633 222 aa25.95■■□□□ 1.74
SSBP4-205ENST00000598159 ZNF862O60290 1169 aa25.95■■□□□ 1.74
SSBP4-205ENST00000598159 RPS6KA5O75582 802 aa25.95■■□□□ 1.74
SSBP4-205ENST00000598159 DGKIO75912 1065 aa25.95■■□□□ 1.74
SSBP4-205ENST00000598159 OATP04181 439 aa25.95■■□□□ 1.74
SSBP4-205ENST00000598159 STAG3L1P0CL83 205 aa25.95■■□□□ 1.74
SSBP4-205ENST00000598159 NEK4P51957 841 aa25.95■■□□□ 1.74
SSBP4-205ENST00000598159 CRYBB1P53674 252 aaPredicted RBP25.95■■□□□ 1.74
SSBP4-205ENST00000598159 NFX1Q12986 1120 aaKnown RBP25.95■■□□□ 1.74
SSBP4-205ENST00000598159 ME3Q16798 604 aa25.95■■□□□ 1.74
SSBP4-205ENST00000598159 PTPROQ16827 1216 aa25.95■■□□□ 1.74
SSBP4-205ENST00000598159 HLA-CQ95604 372 aa25.95■■□□□ 1.74
SSBP4-205ENST00000598159 GJA10Q969M2 543 aa25.95■■□□□ 1.74
SSBP4-205ENST00000598159 RWDD3Q9Y3V2 267 aa25.95■■□□□ 1.74
SSBP4-205ENST00000598159 COL4A4P53420 1690 aaPredicted RBP25.95■■□□□ 1.74
SSBP4-205ENST00000598159 RB1P06400 928 aa25.94■■□□□ 1.74
SSBP4-205ENST00000598159 GPM6BQ13491 265 aa25.94■■□□□ 1.74
SSBP4-205ENST00000598159 LETM2Q2VYF4 491 aa25.94■■□□□ 1.74
SSBP4-205ENST00000598159 PPP4R3AQ6IN85 833 aa25.94■■□□□ 1.74
SSBP4-205ENST00000598159 EFCAB12Q6NXP0 572 aa25.94■■□□□ 1.74
SSBP4-205ENST00000598159 B3GNT9Q6UX72 402 aa25.94■■□□□ 1.74
SSBP4-205ENST00000598159 NPAS4Q8IUM7 802 aa25.94■■□□□ 1.74
SSBP4-205ENST00000598159 CRIPAKQ8N1N5 446 aa25.94■■□□□ 1.74
SSBP4-205ENST00000598159 ETNPPLQ8TBG4 499 aa25.94■■□□□ 1.74
SSBP4-205ENST00000598159 LINC01599Q8WXQ3 324 aa25.94■■□□□ 1.74
SSBP4-205ENST00000598159 NAP1L4Q99733 375 aaKnown RBP25.94■■□□□ 1.74
SSBP4-205ENST00000598159 RC3H2Q9HBD1 1191 aaKnown RBP25.94■■□□□ 1.74
SSBP4-205ENST00000598159 ERVK-5Q9HDB9 667 aa25.94■■□□□ 1.74
SSBP4-205ENST00000598159 RNF216Q9NWF9 866 aaPredicted RBP25.94■■□□□ 1.74
SSBP4-205ENST00000598159 NOC2LQ9Y3T9 749 aaKnown RBP25.94■■□□□ 1.74
SSBP4-205ENST00000598159 CUL9Q8IWT3 2517 aa25.94■■□□□ 1.74
SSBP4-205ENST00000598159 ADGRA3Q8IWK6 1321 aa25.93■■□□□ 1.74
SSBP4-205ENST00000598159 GPR32O75388 356 aa25.93■■□□□ 1.74
SSBP4-205ENST00000598159 GCFC2P16383 781 aaKnown RBP25.93■■□□□ 1.74
SSBP4-205ENST00000598159 PRKCEQ02156 737 aa25.93■■□□□ 1.74
SSBP4-205ENST00000598159 TMEM266Q2M3C6 531 aa25.93■■□□□ 1.74
SSBP4-205ENST00000598159 NEK8Q86SG6 692 aa25.93■■□□□ 1.74
SSBP4-205ENST00000598159 NECAB1Q8N987 351 aa25.93■■□□□ 1.74
SSBP4-205ENST00000598159 MRPL38Q96DV4 380 aaKnown RBP25.93■■□□□ 1.74
SSBP4-205ENST00000598159 FAM20AQ96MK3 541 aa25.93■■□□□ 1.74
SSBP4-205ENST00000598159 TMX1Q9H3N1 280 aa25.93■■□□□ 1.74
SSBP4-205ENST00000598159 NLRC5Q86WI3 1866 aa25.92■■□□□ 1.74
SSBP4-205ENST00000598159 C5orf67F2Z3F1 127 aa25.92■■□□□ 1.74
SSBP4-205ENST00000598159 SEC24BO95487 1268 aa25.92■■□□□ 1.74
SSBP4-205ENST00000598159 FDPSP14324 419 aaKnown RBP25.92■■□□□ 1.74
SSBP4-205ENST00000598159 BMPR1AP36894 532 aa25.92■■□□□ 1.74
SSBP4-205ENST00000598159 TFF2Q03403 129 aa25.92■■□□□ 1.74
SSBP4-205ENST00000598159 BTG3Q14201 252 aaPredicted RBP25.92■■□□□ 1.74
SSBP4-205ENST00000598159 KIZQ2M2Z5 673 aa25.92■■□□□ 1.74
SSBP4-205ENST00000598159 TMEM40Q8WWA1 233 aa25.92■■□□□ 1.74
SSBP4-205ENST00000598159 CLP1Q92989 425 aaKnown RBP25.92■■□□□ 1.74
SSBP4-205ENST00000598159 GTF3C6Q969F1 213 aa25.92■■□□□ 1.74
SSBP4-205ENST00000598159 MAP7D2Q96T17 732 aa25.92■■□□□ 1.74
SSBP4-205ENST00000598159 GJB4Q9NTQ9 266 aa25.92■■□□□ 1.74
SSBP4-205ENST00000598159 ST3GAL5Q9UNP4 418 aa25.92■■□□□ 1.74
SSBP4-205ENST00000598159 VCANP13611 3396 aa25.92■■□□□ 1.74
SSBP4-205ENST00000598159 RALGAPA2Q2PPJ7 1873 aa25.91■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms