RNA–Protein interactions for RNA: ENST00000596445.5

VRK3-211, Transcript of vaccinia related kinase 3, humanhuman

TSL 5

Gene VRK3, Length 840 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-211ENST00000596445 TMEM150BA6NC51 233 aa9.34□□□□□ -0.91
VRK3-211ENST00000596445 ZBTB39O15060 712 aa9.34□□□□□ -0.91
VRK3-211ENST00000596445 KIAA0355O15063 1070 aa9.34□□□□□ -0.91
VRK3-211ENST00000596445 MAGEB2O15479 319 aa9.34□□□□□ -0.91
VRK3-211ENST00000596445 CUTAO60888 179 aa9.34□□□□□ -0.91
VRK3-211ENST00000596445 CYP2C9P11712 490 aa9.34□□□□□ -0.91
VRK3-211ENST00000596445 KLRC1P26715 233 aa9.34□□□□□ -0.91
VRK3-211ENST00000596445 UBA7P41226 1012 aa9.34□□□□□ -0.91
VRK3-211ENST00000596445 ME1P48163 572 aa9.34□□□□□ -0.91
VRK3-211ENST00000596445 MLLT1Q03111 559 aaPredicted RBP9.34□□□□□ -0.91
VRK3-211ENST00000596445 ECM1Q16610 540 aa9.34□□□□□ -0.91
VRK3-211ENST00000596445 MTERF2Q49AM1 385 aa9.34□□□□□ -0.91
VRK3-211ENST00000596445 XKR9Q5GH70 373 aa9.34□□□□□ -0.91
VRK3-211ENST00000596445 HYIQ5T013 277 aa9.34□□□□□ -0.91
VRK3-211ENST00000596445 TAF2Q6P1X5 1199 aa9.34□□□□□ -0.91
VRK3-211ENST00000596445 POTEGQ6S5H5 508 aa9.34□□□□□ -0.91
VRK3-211ENST00000596445 MTHFD1LQ6UB35 978 aa9.34□□□□□ -0.91
VRK3-211ENST00000596445 CABP7Q86V35 215 aa9.34□□□□□ -0.91
VRK3-211ENST00000596445 KCTD17Q8N5Z5 321 aa9.34□□□□□ -0.91
VRK3-211ENST00000596445 ZNF579Q8NAF0 562 aaKnown RBP9.34□□□□□ -0.91
VRK3-211ENST00000596445 PIGOQ8TEQ8 1089 aa9.34□□□□□ -0.91
VRK3-211ENST00000596445 EPSTI1Q96J88 318 aa9.34□□□□□ -0.91
VRK3-211ENST00000596445 CHAMP1Q96JM3 812 aa9.34□□□□□ -0.91
VRK3-211ENST00000596445 SPATA32Q96LK8 384 aa9.34□□□□□ -0.91
VRK3-211ENST00000596445 CLIC6Q96NY7 704 aa9.34□□□□□ -0.91
VRK3-211ENST00000596445 NT5C3AQ9H0P0 336 aa9.34□□□□□ -0.91
VRK3-211ENST00000596445 CYP26B1Q9NR63 512 aa9.34□□□□□ -0.91
VRK3-211ENST00000596445 PRKAG2Q9UGJ0 569 aa9.34□□□□□ -0.91
VRK3-211ENST00000596445 DBR1Q9UK59 544 aaKnown RBP9.34□□□□□ -0.91
VRK3-211ENST00000596445 TBX21Q9UL17 535 aa9.34□□□□□ -0.91
VRK3-211ENST00000596445 KIAA1024Q9UPX6 916 aa9.34□□□□□ -0.91
VRK3-211ENST00000596445 PCDHA2Q9Y5H9 948 aa9.34□□□□□ -0.91
VRK3-211ENST00000596445 SMIM35A0A1B0GVV1 85 aa9.33□□□□□ -0.92
VRK3-211ENST00000596445 TRIM43BA6NCK2 446 aa9.33□□□□□ -0.92
VRK3-211ENST00000596445 PITPNM1O00562 1244 aa9.33□□□□□ -0.92
VRK3-211ENST00000596445 C22orf31O95567 290 aa9.33□□□□□ -0.92
VRK3-211ENST00000596445 RPLP2P05387 115 aaKnown RBP9.33□□□□□ -0.92
VRK3-211ENST00000596445 NPEPPSP55786 919 aa9.33□□□□□ -0.92
VRK3-211ENST00000596445 RBL2Q08999 1139 aa9.33□□□□□ -0.92
VRK3-211ENST00000596445 TBC1D8BQ0IIM8 1120 aa9.33□□□□□ -0.92
VRK3-211ENST00000596445 GRB10Q13322 594 aa9.33□□□□□ -0.92
VRK3-211ENST00000596445 BFSP2Q13515 415 aa9.33□□□□□ -0.92
VRK3-211ENST00000596445 SPECC1Q5M775 1068 aa9.33□□□□□ -0.92
VRK3-211ENST00000596445 AXDND1Q5T1B0 1012 aaPredicted RBP9.33□□□□□ -0.92
VRK3-211ENST00000596445 PLA2G4FQ68DD2 849 aa9.33□□□□□ -0.92
VRK3-211ENST00000596445 USP49Q70CQ1 688 aa9.33□□□□□ -0.92
VRK3-211ENST00000596445 SH3RF1Q7Z6J0 888 aa9.33□□□□□ -0.92
VRK3-211ENST00000596445 RPAINQ86UA6 219 aa9.33□□□□□ -0.92
VRK3-211ENST00000596445 EXOC8Q8IYI6 725 aa9.33□□□□□ -0.92
VRK3-211ENST00000596445 CCDC155Q8N6L0 562 aa9.33□□□□□ -0.92
VRK3-211ENST00000596445 RETREG2Q8NC44 543 aa9.33□□□□□ -0.92
VRK3-211ENST00000596445 CAGE1Q8TC20 777 aa9.33□□□□□ -0.92
VRK3-211ENST00000596445 DHX38Q92620 1227 aaKnown RBP9.33□□□□□ -0.92
VRK3-211ENST00000596445 SYMPKQ92797 1274 aaKnown RBP9.33□□□□□ -0.92
VRK3-211ENST00000596445 TRIM43Q96BQ3 446 aaPredicted RBP9.33□□□□□ -0.92
VRK3-211ENST00000596445 CALML4Q96GE6 196 aa9.33□□□□□ -0.92
VRK3-211ENST00000596445 CDK5RAP3Q96JB5 506 aa9.33□□□□□ -0.92
VRK3-211ENST00000596445 CEP170P1Q96L14 293 aa9.33□□□□□ -0.92
VRK3-211ENST00000596445 CEP89Q96ST8 783 aa9.33□□□□□ -0.92
VRK3-211ENST00000596445 JPH2Q9BR39 696 aaPredicted RBP9.33□□□□□ -0.92
VRK3-211ENST00000596445 SH2D3AQ9BRG2 576 aa9.33□□□□□ -0.92
VRK3-211ENST00000596445 NOC4LQ9BVI4 516 aaKnown RBP9.33□□□□□ -0.92
VRK3-211ENST00000596445 CCSER1Q9C0I3 900 aa9.33□□□□□ -0.92
VRK3-211ENST00000596445 HIPK3Q9H422 1215 aa9.33□□□□□ -0.92
VRK3-211ENST00000596445 PRDM5Q9NQX1 630 aaPredicted RBP9.33□□□□□ -0.92
VRK3-211ENST00000596445 DDX19AQ9NUU7 478 aaKnown RBP9.33□□□□□ -0.92
VRK3-211ENST00000596445 PCDHA7Q9UN72 937 aa9.33□□□□□ -0.92
VRK3-211ENST00000596445 DNM3Q9UQ16 869 aa9.33□□□□□ -0.92
VRK3-211ENST00000596445 RANBP2P49792 3224 aaKnown RBP9.33□□□□□ -0.92
VRK3-211ENST00000596445 TANC1Q9C0D5 1861 aa9.32□□□□□ -0.92
VRK3-211ENST00000596445 A0A087WWV3 80 aa9.32□□□□□ -0.92
VRK3-211ENST00000596445 ARHGEF35A5YM69 484 aa9.32□□□□□ -0.92
VRK3-211ENST00000596445 GAS2O43903 313 aaKnown RBP9.32□□□□□ -0.92
VRK3-211ENST00000596445 CAND2O75155 1236 aa9.32□□□□□ -0.92
VRK3-211ENST00000596445 MAFO75444 373 aaPredicted RBP9.32□□□□□ -0.92
VRK3-211ENST00000596445 EYA4O95677 639 aa9.32□□□□□ -0.92
VRK3-211ENST00000596445 TIMP1P01033 207 aa9.32□□□□□ -0.92
VRK3-211ENST00000596445 CKBP12277 381 aa9.32□□□□□ -0.92
VRK3-211ENST00000596445 RAG1P15918 1043 aa9.32□□□□□ -0.92
VRK3-211ENST00000596445 TMOD1P28289 359 aa9.32□□□□□ -0.92
VRK3-211ENST00000596445 TXLNAP40222 546 aa9.32□□□□□ -0.92
VRK3-211ENST00000596445 RFC5P40937 340 aa9.32□□□□□ -0.92
VRK3-211ENST00000596445 RARRES1P49788 294 aa9.32□□□□□ -0.92
VRK3-211ENST00000596445 POLGP54098 1239 aaPredicted RBP9.32□□□□□ -0.92
VRK3-211ENST00000596445 ZRSR1Q15695 479 aaKnown RBP9.32□□□□□ -0.92
VRK3-211ENST00000596445 TRIM71Q2Q1W2 868 aaKnown RBP9.32□□□□□ -0.92
VRK3-211ENST00000596445 TMEM119Q4V9L6 283 aa9.32□□□□□ -0.92
VRK3-211ENST00000596445 EFCAB12Q6NXP0 572 aa9.32□□□□□ -0.92
VRK3-211ENST00000596445 RUFY4Q6ZNE9 571 aa9.32□□□□□ -0.92
VRK3-211ENST00000596445 RSPH3Q86UC2 560 aa9.32□□□□□ -0.92
VRK3-211ENST00000596445 KIAA0319LQ8IZA0 1049 aa9.32□□□□□ -0.92
VRK3-211ENST00000596445 NME8Q8N427 588 aa9.32□□□□□ -0.92
VRK3-211ENST00000596445 METTL13Q8N6R0 699 aa9.32□□□□□ -0.92
VRK3-211ENST00000596445 RASSF8Q8NHQ8 419 aa9.32□□□□□ -0.92
VRK3-211ENST00000596445 SLC7A3Q8WY07 619 aa9.32□□□□□ -0.92
VRK3-211ENST00000596445 WNT8BQ93098 351 aa9.32□□□□□ -0.92
VRK3-211ENST00000596445 ZBTB10Q96DT7 871 aa9.32□□□□□ -0.92
VRK3-211ENST00000596445 CCDC43Q96MW1 224 aaKnown RBP9.32□□□□□ -0.92
VRK3-211ENST00000596445 PNMA5Q96PV4 448 aa9.32□□□□□ -0.92
VRK3-211ENST00000596445 DHX33Q9H6R0 707 aaKnown RBP9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms