RNA–Protein interactions for RNA: ENST00000591545.5

SMARCA4-216, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 5,193 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-216ENST00000591545 ASPHQ12797 758 aa14.36□□□□□ -0.11
SMARCA4-216ENST00000591545 SCARF1Q14162 830 aa14.36□□□□□ -0.11
SMARCA4-216ENST00000591545 MAPK6Q16659 721 aa14.36□□□□□ -0.11
SMARCA4-216ENST00000591545 HHIPL2Q6UWX4 724 aa14.36□□□□□ -0.11
SMARCA4-216ENST00000591545 LPAR1Q92633 364 aa14.36□□□□□ -0.11
SMARCA4-216ENST00000591545 SDCCAG3Q96C92 435 aa14.36□□□□□ -0.11
SMARCA4-216ENST00000591545 PCIF1Q9H4Z3 704 aa14.36□□□□□ -0.11
SMARCA4-216ENST00000591545 DAGLAQ9Y4D2 1042 aa14.36□□□□□ -0.11
SMARCA4-216ENST00000591545 TTC36A6NLP5 189 aa14.35□□□□□ -0.11
SMARCA4-216ENST00000591545 ECE1P42892 770 aa14.35□□□□□ -0.11
SMARCA4-216ENST00000591545 DPCR1Q3MIW9 517 aa14.35□□□□□ -0.11
SMARCA4-216ENST00000591545 ZNF70Q9UC06 446 aaPredicted RBP14.35□□□□□ -0.11
SMARCA4-216ENST00000591545 IPO11Q9UI26 975 aaKnown RBP14.35□□□□□ -0.11
SMARCA4-216ENST00000591545 PRELPP51888 382 aa14.35□□□□□ -0.11
SMARCA4-216ENST00000591545 RCAN1P53805 252 aa14.35□□□□□ -0.11
SMARCA4-216ENST00000591545 TRIM68Q6AZZ1 485 aa14.35□□□□□ -0.11
SMARCA4-216ENST00000591545 THEM5Q8N1Q8 247 aa14.35□□□□□ -0.11
SMARCA4-216ENST00000591545 FAM20AQ96MK3 541 aa14.35□□□□□ -0.11
SMARCA4-216ENST00000591545 SLITRK6Q9H5Y7 841 aa14.35□□□□□ -0.11
SMARCA4-216ENST00000591545 RNF139Q8WU17 664 aa14.35□□□□□ -0.11
SMARCA4-216ENST00000591545 PSPC1Q8WXF1 523 aaKnown RBP14.35□□□□□ -0.11
SMARCA4-216ENST00000591545 OSBPL5Q9H0X9 879 aaPredicted RBP14.35□□□□□ -0.11
SMARCA4-216ENST00000591545 EMILIN3Q9NT22 766 aa14.35□□□□□ -0.11
SMARCA4-216ENST00000591545 SPTLC3Q9NUV7 552 aa14.35□□□□□ -0.11
SMARCA4-216ENST00000591545 PPP1R9AQ9ULJ8 1098 aa14.35□□□□□ -0.11
SMARCA4-216ENST00000591545 ZBTB12Q9Y330 459 aaPredicted RBP14.35□□□□□ -0.11
SMARCA4-216ENST00000591545 ADAMTS13Q76LX8 1427 aa14.35□□□□□ -0.11
SMARCA4-216ENST00000591545 VPS41P49754 854 aa14.35□□□□□ -0.11
SMARCA4-216ENST00000591545 RBBP5Q15291 538 aaKnown RBP14.35□□□□□ -0.11
SMARCA4-216ENST00000591545 NXNQ6DKJ4 435 aa14.35□□□□□ -0.11
SMARCA4-216ENST00000591545 SIX6OS1Q8N1H7 587 aa14.35□□□□□ -0.11
SMARCA4-216ENST00000591545 BHMT2Q9H2M3 363 aa14.35□□□□□ -0.11
SMARCA4-216ENST00000591545 ZNF302Q9NR11 478 aa14.35□□□□□ -0.11
SMARCA4-216ENST00000591545 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.35□□□□□ -0.11
SMARCA4-216ENST00000591545 EPB41L3Q9Y2J2 1087 aaPredicted RBP14.35□□□□□ -0.11
SMARCA4-216ENST00000591545 RFX7Q2KHR2 1363 aa14.34□□□□□ -0.11
SMARCA4-216ENST00000591545 PSMD14O00487 310 aa14.34□□□□□ -0.11
SMARCA4-216ENST00000591545 C11orf57Q6ZUT1 292 aaPredicted RBP14.34□□□□□ -0.11
SMARCA4-216ENST00000591545 TECPR2O15040 1411 aa14.34□□□□□ -0.11
SMARCA4-216ENST00000591545 KBTBD13C9JR72 458 aa14.34□□□□□ -0.11
SMARCA4-216ENST00000591545 GRM4Q14833 912 aa14.34□□□□□ -0.11
SMARCA4-216ENST00000591545 ZNF280CQ8ND82 737 aa14.34□□□□□ -0.11
SMARCA4-216ENST00000591545 AGBL3Q8NEM8 1001 aa14.34□□□□□ -0.11
SMARCA4-216ENST00000591545 FAM151AQ8WW52 585 aa14.34□□□□□ -0.11
SMARCA4-216ENST00000591545 CCDC68Q9H2F9 335 aa14.34□□□□□ -0.11
SMARCA4-216ENST00000591545 TXLNGQ9NUQ3 528 aa14.34□□□□□ -0.11
SMARCA4-216ENST00000591545 MAN1B1Q9UKM7 699 aa14.34□□□□□ -0.11
SMARCA4-216ENST00000591545 INPP5FQ9Y2H2 1132 aa14.34□□□□□ -0.11
SMARCA4-216ENST00000591545 PPLO60437 1756 aa14.34□□□□□ -0.11
SMARCA4-216ENST00000591545 WDR46O15213 610 aaKnown RBP14.34□□□□□ -0.11
SMARCA4-216ENST00000591545 CETPP11597 493 aa14.34□□□□□ -0.11
SMARCA4-216ENST00000591545 MXI1P50539 228 aa14.34□□□□□ -0.11
SMARCA4-216ENST00000591545 MTMR2Q13614 643 aa14.34□□□□□ -0.11
SMARCA4-216ENST00000591545 ELMOD1Q8N336 334 aa14.34□□□□□ -0.11
SMARCA4-216ENST00000591545 NRBP1Q9UHY1 535 aa14.34□□□□□ -0.11
SMARCA4-216ENST00000591545 VGLL3A8MV65 326 aa14.34□□□□□ -0.11
SMARCA4-216ENST00000591545 CLIC2O15247 247 aa14.34□□□□□ -0.11
SMARCA4-216ENST00000591545 CELF2O95319 508 aaKnown RBP14.34□□□□□ -0.11
SMARCA4-216ENST00000591545 ECEL1O95672 775 aa14.34□□□□□ -0.11
SMARCA4-216ENST00000591545 NECTIN1Q15223 517 aa14.34□□□□□ -0.11
SMARCA4-216ENST00000591545 LRRC41Q15345 812 aa14.34□□□□□ -0.11
SMARCA4-216ENST00000591545 PFKFB3Q16875 520 aaPredicted RBP14.34□□□□□ -0.11
SMARCA4-216ENST00000591545 SPATA33Q96N06 139 aa14.34□□□□□ -0.11
SMARCA4-216ENST00000591545 EPB41L5Q9HCM4 733 aa14.34□□□□□ -0.11
SMARCA4-216ENST00000591545 CEP170BQ9Y4F5 1589 aaPredicted RBP14.34□□□□□ -0.11
SMARCA4-216ENST00000591545 PPFIA2O75334 1257 aa14.33□□□□□ -0.11
SMARCA4-216ENST00000591545 DNAJC8O75937 253 aaPredicted RBP14.33□□□□□ -0.11
SMARCA4-216ENST00000591545 TTC4O95801 387 aa14.33□□□□□ -0.11
SMARCA4-216ENST00000591545 PEX3P56589 373 aa14.33□□□□□ -0.11
SMARCA4-216ENST00000591545 IFT88Q13099 833 aa14.33□□□□□ -0.11
SMARCA4-216ENST00000591545 PPP2R5CQ13362 524 aa14.33□□□□□ -0.11
SMARCA4-216ENST00000591545 TKFCQ3LXA3 575 aa14.33□□□□□ -0.11
SMARCA4-216ENST00000591545 ANKRD20A4Q4UJ75 823 aa14.33□□□□□ -0.11
SMARCA4-216ENST00000591545 ANKRD20A8PQ5CZ79 823 aa14.33□□□□□ -0.11
SMARCA4-216ENST00000591545 ANKRD20A2Q5SQ80 823 aa14.33□□□□□ -0.11
SMARCA4-216ENST00000591545 ANKRD20A1Q5TYW2 823 aa14.33□□□□□ -0.11
SMARCA4-216ENST00000591545 TEX13BQ9BXU2 312 aa14.33□□□□□ -0.11
SMARCA4-216ENST00000591545 C2orf40Q9H1Z8 148 aa14.33□□□□□ -0.11
SMARCA4-216ENST00000591545 BAG5Q9UL15 447 aa14.33□□□□□ -0.11
SMARCA4-216ENST00000591545 RIMS1Q86UR5 1692 aaKnown RBP14.33□□□□□ -0.11
SMARCA4-216ENST00000591545 NEURL4Q96JN8 1562 aa14.33□□□□□ -0.12
SMARCA4-216ENST00000591545 CCNE1P24864 410 aa14.33□□□□□ -0.12
SMARCA4-216ENST00000591545 TGFB2P61812 414 aa14.33□□□□□ -0.12
SMARCA4-216ENST00000591545 YWHAGP61981 247 aaKnown RBP eCLIP14.33□□□□□ -0.124e-6■■■□□ 14.9
SMARCA4-216ENST00000591545 PRPSAP1Q14558 356 aa14.33□□□□□ -0.12
SMARCA4-216ENST00000591545 QRICH1Q2TAL8 776 aa14.33□□□□□ -0.12
SMARCA4-216ENST00000591545 C4orf50Q6ZRC1 276 aa14.33□□□□□ -0.12
SMARCA4-216ENST00000591545 TBC1D10CQ8IV04 446 aa14.33□□□□□ -0.12
SMARCA4-216ENST00000591545 RYBPQ8N488 228 aaPredicted RBP14.33□□□□□ -0.12
SMARCA4-216ENST00000591545 SCYL1Q96KG9 808 aa14.33□□□□□ -0.12
SMARCA4-216ENST00000591545 KIF9Q9HAQ2 790 aa14.33□□□□□ -0.12
SMARCA4-216ENST00000591545 PREX1Q8TCU6 1659 aa14.33□□□□□ -0.12
SMARCA4-216ENST00000591545 AP1ARQ63HQ0 302 aa14.33□□□□□ -0.12
SMARCA4-216ENST00000591545 THNSL1Q8IYQ7 743 aa14.33□□□□□ -0.12
SMARCA4-216ENST00000591545 ANKRD13AQ8IZ07 590 aa14.33□□□□□ -0.12
SMARCA4-216ENST00000591545 FBXO41Q8TF61 875 aa14.33□□□□□ -0.12
SMARCA4-216ENST00000591545 SLC38A10Q9HBR0 1119 aa14.33□□□□□ -0.12
SMARCA4-216ENST00000591545 SEPT10Q9P0V9 454 aa14.33□□□□□ -0.12
SMARCA4-216ENST00000591545 POLIQ9UNA4 740 aa14.33□□□□□ -0.12
SMARCA4-216ENST00000591545 WDR19Q8NEZ3 1342 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms