RNA–Protein interactions for RNA: ENST00000590619.1

DNMT1-222, Transcript of DNA methyltransferase 1, humanhuman

TSL 1 (best)

Gene DNMT1, Length 231 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-222ENST00000590619 KIF1BPQ96EK5 621 aa7.53□□□□□ -1.2
DNMT1-222ENST00000590619 SPATA6Q9NWH7 488 aaPredicted RBP7.53□□□□□ -1.2
DNMT1-222ENST00000590619 MTF2Q9Y483 593 aaPredicted RBP7.53□□□□□ -1.2
DNMT1-222ENST00000590619 CNOT1A5YKK6 2376 aaKnown RBP7.53□□□□□ -1.2
DNMT1-222ENST00000590619 SPEGQ15772 3267 aa7.53□□□□□ -1.2
DNMT1-222ENST00000590619 ABCB11O95342 1321 aa7.52□□□□□ -1.2
DNMT1-222ENST00000590619 C9IYK1 514 aa7.52□□□□□ -1.21
DNMT1-222ENST00000590619 NOP56O00567 594 aaKnown RBP7.52□□□□□ -1.21
DNMT1-222ENST00000590619 OPLAHO14841 1288 aa7.52□□□□□ -1.21
DNMT1-222ENST00000590619 TM4SF5O14894 197 aa7.52□□□□□ -1.21
DNMT1-222ENST00000590619 CFBP00751 764 aa7.52□□□□□ -1.21
DNMT1-222ENST00000590619 SNHG28P0DPA3 235 aa7.52□□□□□ -1.21
DNMT1-222ENST00000590619 KCNA4P22459 653 aa7.52□□□□□ -1.21
DNMT1-222ENST00000590619 PDE4AP27815 886 aa7.52□□□□□ -1.21
DNMT1-222ENST00000590619 TMEM62Q0P6H9 643 aa7.52□□□□□ -1.21
DNMT1-222ENST00000590619 NFX1Q12986 1120 aaKnown RBP7.52□□□□□ -1.21
DNMT1-222ENST00000590619 PGM5Q15124 567 aa7.52□□□□□ -1.21
DNMT1-222ENST00000590619 TMEM266Q2M3C6 531 aa7.52□□□□□ -1.21
DNMT1-222ENST00000590619 LETM2Q2VYF4 491 aa7.52□□□□□ -1.21
DNMT1-222ENST00000590619 DCLRE1AQ6PJP8 1040 aa7.52□□□□□ -1.21
DNMT1-222ENST00000590619 TSSK4Q6SA08 328 aa7.52□□□□□ -1.21
DNMT1-222ENST00000590619 METTL7BQ6UX53 244 aa7.52□□□□□ -1.21
DNMT1-222ENST00000590619 CCDC149Q6ZUS6 474 aa7.52□□□□□ -1.21
DNMT1-222ENST00000590619 IL31RAQ8NI17 732 aa7.52□□□□□ -1.21
DNMT1-222ENST00000590619 CASD1Q96PB1 797 aa7.52□□□□□ -1.21
DNMT1-222ENST00000590619 SEC62Q99442 399 aaKnown RBP7.52□□□□□ -1.21
DNMT1-222ENST00000590619 ADAM2Q99965 735 aa7.52□□□□□ -1.21
DNMT1-222ENST00000590619 CELF4Q9BZC1 486 aaKnown RBP7.52□□□□□ -1.21
DNMT1-222ENST00000590619 ARHGEF3Q9NR81 526 aa7.52□□□□□ -1.21
DNMT1-222ENST00000590619 RGS18Q9NS28 235 aa7.52□□□□□ -1.21
DNMT1-222ENST00000590619 DZANK1Q9NVP4 752 aa7.52□□□□□ -1.21
DNMT1-222ENST00000590619 SPG21Q9NZD8 308 aa7.52□□□□□ -1.21
DNMT1-222ENST00000590619 GMEB2Q9UKD1 530 aa7.52□□□□□ -1.21
DNMT1-222ENST00000590619 MRPL11Q9Y3B7 192 aaKnown RBP7.52□□□□□ -1.21
DNMT1-222ENST00000590619 FRYQ5TBA9 3013 aa7.52□□□□□ -1.21
DNMT1-222ENST00000590619 ZZEF1O43149 2961 aa7.51□□□□□ -1.21
DNMT1-222ENST00000590619 KIAA1671Q9BY89 1806 aa7.51□□□□□ -1.21
DNMT1-222ENST00000590619 SRRM3A6NNA2 597 aaPredicted RBP7.51□□□□□ -1.21
DNMT1-222ENST00000590619 CYSRT1A8MQ03 144 aa7.51□□□□□ -1.21
DNMT1-222ENST00000590619 SPATA31C2B4DYI2 1134 aa7.51□□□□□ -1.21
DNMT1-222ENST00000590619 FGRP09769 529 aa7.51□□□□□ -1.21
DNMT1-222ENST00000590619 HSD17B4P51659 736 aa7.51□□□□□ -1.21
DNMT1-222ENST00000590619 PPFIA1Q13136 1202 aa7.51□□□□□ -1.21
DNMT1-222ENST00000590619 PAK2Q13177 524 aa7.51□□□□□ -1.21
DNMT1-222ENST00000590619 SEMA3FQ13275 785 aa7.51□□□□□ -1.21
DNMT1-222ENST00000590619 NEDD9Q14511 834 aa7.51□□□□□ -1.21
DNMT1-222ENST00000590619 NONOQ15233 471 aaKnown RBP eCLIP7.51□□□□□ -1.21
DNMT1-222ENST00000590619 PTPN14Q15678 1187 aa7.51□□□□□ -1.21
DNMT1-222ENST00000590619 GRIK4Q16099 956 aa7.51□□□□□ -1.21
DNMT1-222ENST00000590619 CDC37Q16543 378 aaPredicted RBP7.51□□□□□ -1.21
DNMT1-222ENST00000590619 LPAL2Q16609 132 aa7.51□□□□□ -1.21
DNMT1-222ENST00000590619 UNQ6494/PRO21346Q6UXR6 183 aa7.51□□□□□ -1.21
DNMT1-222ENST00000590619 SLC24A5Q71RS6 500 aa7.51□□□□□ -1.21
DNMT1-222ENST00000590619 CABP7Q86V35 215 aa7.51□□□□□ -1.21
DNMT1-222ENST00000590619 ADGRF4Q8IZF3 695 aa7.51□□□□□ -1.21
DNMT1-222ENST00000590619 KBTBD3Q8NAB2 608 aa7.51□□□□□ -1.21
DNMT1-222ENST00000590619 AUTS2Q8WXX7 1259 aa7.51□□□□□ -1.21
DNMT1-222ENST00000590619 DDX1Q92499 740 aaKnown RBP7.51□□□□□ -1.21
DNMT1-222ENST00000590619 GLG1Q92896 1179 aa7.51□□□□□ -1.21
DNMT1-222ENST00000590619 MAP4K1Q92918 833 aa7.51□□□□□ -1.21
DNMT1-222ENST00000590619 NXPE3Q969Y0 559 aa7.51□□□□□ -1.21
DNMT1-222ENST00000590619 BCO2Q9BYV7 579 aa7.51□□□□□ -1.21
DNMT1-222ENST00000590619 NACAP1Q9BZK3 213 aa7.51□□□□□ -1.21
DNMT1-222ENST00000590619 FAM49AQ9H0Q0 323 aaPredicted RBP7.51□□□□□ -1.21
DNMT1-222ENST00000590619 NAPBQ9H115 298 aa7.51□□□□□ -1.21
DNMT1-222ENST00000590619 CDHR5Q9HBB8 845 aa7.51□□□□□ -1.21
DNMT1-222ENST00000590619 SEMA4GQ9NTN9 838 aa7.51□□□□□ -1.21
DNMT1-222ENST00000590619 TCP11L1Q9NUJ3 509 aa7.51□□□□□ -1.21
DNMT1-222ENST00000590619 EPS15L1Q9UBC2 864 aa7.51□□□□□ -1.21
DNMT1-222ENST00000590619 TUBE1Q9UJT0 475 aa7.51□□□□□ -1.21
DNMT1-222ENST00000590619 ZNF215Q9UL58 517 aaPredicted RBP7.51□□□□□ -1.21
DNMT1-222ENST00000590619 TRPV2Q9Y5S1 764 aa7.51□□□□□ -1.21
DNMT1-222ENST00000590619 IGSF9BQ9UPX0 1349 aa7.51□□□□□ -1.21
DNMT1-222ENST00000590619 KIAA1217Q5T5P2 1943 aa7.5□□□□□ -1.21
DNMT1-222ENST00000590619 FAM170BA6NMN3 283 aa7.5□□□□□ -1.21
DNMT1-222ENST00000590619 NT5C1B-RDH14C9J2C7 533 aa7.5□□□□□ -1.21
DNMT1-222ENST00000590619 TAF4O00268 1085 aa7.5□□□□□ -1.21
DNMT1-222ENST00000590619 ORC4O43929 436 aa7.5□□□□□ -1.21
DNMT1-222ENST00000590619 CA8P35219 290 aa7.5□□□□□ -1.21
DNMT1-222ENST00000590619 IGBP1P78318 339 aa7.5□□□□□ -1.21
DNMT1-222ENST00000590619 GPC5P78333 572 aa7.5□□□□□ -1.21
DNMT1-222ENST00000590619 MRPS9P82933 396 aaKnown RBP7.5□□□□□ -1.21
DNMT1-222ENST00000590619 GHRHRQ02643 423 aa7.5□□□□□ -1.21
DNMT1-222ENST00000590619 QRICH1Q2TAL8 776 aa7.5□□□□□ -1.21
DNMT1-222ENST00000590619 ZKSCAN2Q63HK3 967 aa7.5□□□□□ -1.21
DNMT1-222ENST00000590619 PRR23CQ6ZRP0 262 aa7.5□□□□□ -1.21
DNMT1-222ENST00000590619 SLC39A11Q8N1S5 342 aa7.5□□□□□ -1.21
DNMT1-222ENST00000590619 ST13P5Q8NFI4 369 aaPredicted RBP7.5□□□□□ -1.21
DNMT1-222ENST00000590619 TTC14Q96N46 770 aa7.5□□□□□ -1.21
DNMT1-222ENST00000590619 ZNF558Q96NG5 402 aa7.5□□□□□ -1.21
DNMT1-222ENST00000590619 MYADMQ96S97 322 aa7.5□□□□□ -1.21
DNMT1-222ENST00000590619 RPP25Q9BUL9 199 aaKnown RBP7.5□□□□□ -1.21
DNMT1-222ENST00000590619 TMEM121BQ9BXQ6 578 aaPredicted RBP7.5□□□□□ -1.21
DNMT1-222ENST00000590619 ATP6V0A4Q9HBG4 840 aa7.5□□□□□ -1.21
DNMT1-222ENST00000590619 VAT1LQ9HCJ6 419 aa7.5□□□□□ -1.21
DNMT1-222ENST00000590619 SLC2A4RGQ9NR83 387 aa7.5□□□□□ -1.21
DNMT1-222ENST00000590619 C1orf112Q9NSG2 853 aa7.5□□□□□ -1.21
DNMT1-222ENST00000590619 RNF19AQ9NV58 838 aa7.5□□□□□ -1.21
DNMT1-222ENST00000590619 RTEL1Q9NZ71 1219 aa7.5□□□□□ -1.21
DNMT1-222ENST00000590619 LHX6Q9UPM6 363 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms