RNA–Protein interactions for RNA: ENST00000589050.1

RPRD1A-208, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

TSL 1 (best)

Gene RPRD1A, Length 1,022 nt, Biotype non stop decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-208ENST00000589050 RRN3P2A6NIE6 340 aa17.27■□□□□ 0.36
RPRD1A-208ENST00000589050 ZBTB42B2RXF5 422 aa17.27■□□□□ 0.36
RPRD1A-208ENST00000589050 E9PMD0 336 aa17.27■□□□□ 0.36
RPRD1A-208ENST00000589050 PQBP1O60828 265 aaKnown RBP17.27■□□□□ 0.36
RPRD1A-208ENST00000589050 GNAT1P11488 350 aa17.27■□□□□ 0.36
RPRD1A-208ENST00000589050 XRCC6P12956 609 aaKnown RBP eCLIP17.27■□□□□ 0.36
RPRD1A-208ENST00000589050 PLCG1P19174 1290 aa17.27■□□□□ 0.36
RPRD1A-208ENST00000589050 CMA1P23946 247 aa17.27■□□□□ 0.36
RPRD1A-208ENST00000589050 HOXC8P31273 242 aa17.27■□□□□ 0.36
RPRD1A-208ENST00000589050 NPEPPSP55786 919 aa17.27■□□□□ 0.36
RPRD1A-208ENST00000589050 RTP1P59025 263 aa17.27■□□□□ 0.36
RPRD1A-208ENST00000589050 ZNF200P98182 395 aaPredicted RBP17.27■□□□□ 0.36
RPRD1A-208ENST00000589050 HIC1Q14526 733 aa17.27■□□□□ 0.36
RPRD1A-208ENST00000589050 TRIM60Q495X7 471 aa17.27■□□□□ 0.36
RPRD1A-208ENST00000589050 GDF6Q6KF10 455 aaPredicted RBP17.27■□□□□ 0.36
RPRD1A-208ENST00000589050 TMEM87AQ8NBN3 555 aa17.27■□□□□ 0.36
RPRD1A-208ENST00000589050 PANK2Q9BZ23 570 aa17.27■□□□□ 0.36
RPRD1A-208ENST00000589050 CYP26B1Q9NR63 512 aa17.27■□□□□ 0.36
RPRD1A-208ENST00000589050 DBR1Q9UK59 544 aaKnown RBP17.27■□□□□ 0.36
RPRD1A-208ENST00000589050 DNM3Q9UQ16 869 aa17.27■□□□□ 0.36
RPRD1A-208ENST00000589050 ATP11BQ9Y2G3 1177 aa17.27■□□□□ 0.36
RPRD1A-208ENST00000589050 B4GALT4O60513 344 aa17.26■□□□□ 0.35
RPRD1A-208ENST00000589050 TARBP2Q15633 366 aaKnown RBP17.26■□□□□ 0.35
RPRD1A-208ENST00000589050 PTGISQ16647 500 aa17.26■□□□□ 0.35
RPRD1A-208ENST00000589050 MARCH8Q5T0T0 291 aa17.26■□□□□ 0.35
RPRD1A-208ENST00000589050 RRAGBQ5VZM2 374 aa17.26■□□□□ 0.35
RPRD1A-208ENST00000589050 KCNK18Q7Z418 384 aa17.26■□□□□ 0.35
RPRD1A-208ENST00000589050 KCTD17Q8N5Z5 321 aa17.26■□□□□ 0.35
RPRD1A-208ENST00000589050 PDILTQ8N807 584 aa17.26■□□□□ 0.35
RPRD1A-208ENST00000589050 TRPV6Q9H1D0 765 aa17.26■□□□□ 0.35
RPRD1A-208ENST00000589050 TRMT13Q9NUP7 481 aaKnown RBP17.26■□□□□ 0.35
RPRD1A-208ENST00000589050 TUBE1Q9UJT0 475 aa17.26■□□□□ 0.35
RPRD1A-208ENST00000589050 NOD1Q9Y239 953 aa17.26■□□□□ 0.35
RPRD1A-208ENST00000589050 SCN10AQ9Y5Y9 1956 aa17.26■□□□□ 0.35
RPRD1A-208ENST00000589050 A0A087X0B3 334 aa17.25■□□□□ 0.35
RPRD1A-208ENST00000589050 A0A1B0GVL5 298 aa17.25■□□□□ 0.35
RPRD1A-208ENST00000589050 ARHGEF35A5YM69 484 aa17.25■□□□□ 0.35
RPRD1A-208ENST00000589050 DCDC2CA8MYV0 355 aa17.25■□□□□ 0.35
RPRD1A-208ENST00000589050 TLR3O15455 904 aaKnown RBP17.25■□□□□ 0.35
RPRD1A-208ENST00000589050 TREHO43280 583 aa17.25■□□□□ 0.35
RPRD1A-208ENST00000589050 EYA4O95677 639 aa17.25■□□□□ 0.35
RPRD1A-208ENST00000589050 PFKFB1P16118 471 aa17.25■□□□□ 0.35
RPRD1A-208ENST00000589050 KLRC1P26715 233 aa17.25■□□□□ 0.35
RPRD1A-208ENST00000589050 RARRES1P49788 294 aa17.25■□□□□ 0.35
RPRD1A-208ENST00000589050 ADAM17P78536 824 aa17.25■□□□□ 0.35
RPRD1A-208ENST00000589050 TLE2Q04725 743 aa17.25■□□□□ 0.35
RPRD1A-208ENST00000589050 TBC1D8BQ0IIM8 1120 aa17.25■□□□□ 0.35
RPRD1A-208ENST00000589050 MTHFD1LQ6UB35 978 aa17.25■□□□□ 0.35
RPRD1A-208ENST00000589050 CCDC73Q6ZRK6 1079 aa17.25■□□□□ 0.35
RPRD1A-208ENST00000589050 ANKRD33Q7Z3H0 272 aa17.25■□□□□ 0.35
RPRD1A-208ENST00000589050 FAM126BQ8IXS8 530 aa17.25■□□□□ 0.35
RPRD1A-208ENST00000589050 FSIP1Q8NA03 581 aa17.25■□□□□ 0.35
RPRD1A-208ENST00000589050 MRPS27Q92552 414 aaKnown RBP17.25■□□□□ 0.35
RPRD1A-208ENST00000589050 ZBTB10Q96DT7 871 aa17.25■□□□□ 0.35
RPRD1A-208ENST00000589050 BHMT2Q9H2M3 363 aa17.25■□□□□ 0.35
RPRD1A-208ENST00000589050 KCNH3Q9ULD8 1083 aa17.25■□□□□ 0.35
RPRD1A-208ENST00000589050 PPME1Q9Y570 386 aa17.25■□□□□ 0.35
RPRD1A-208ENST00000589050 BRCA2P51587 3418 aa17.24■□□□□ 0.35
RPRD1A-208ENST00000589050 MBLAC1A4D2B0 266 aaPredicted RBP17.24■□□□□ 0.35
RPRD1A-208ENST00000589050 C22orf31O95567 290 aa17.24■□□□□ 0.35
RPRD1A-208ENST00000589050 SSBP05455 408 aaKnown RBP eCLIP17.24■□□□□ 0.35
RPRD1A-208ENST00000589050 STAT6P42226 847 aa17.24■□□□□ 0.35
RPRD1A-208ENST00000589050 LRRC15Q8TF66 581 aa17.24■□□□□ 0.35
RPRD1A-208ENST00000589050 RAD54LQ92698 747 aa17.24■□□□□ 0.35
RPRD1A-208ENST00000589050 TOX2Q96NM4 488 aa17.24■□□□□ 0.35
RPRD1A-208ENST00000589050 CEP89Q96ST8 783 aa17.24■□□□□ 0.35
RPRD1A-208ENST00000589050 HTATIP2Q9BUP3 242 aa17.24■□□□□ 0.35
RPRD1A-208ENST00000589050 GOLPH3LQ9H4A5 285 aa17.24■□□□□ 0.35
RPRD1A-208ENST00000589050 STK17AQ9UEE5 414 aa17.24■□□□□ 0.35
RPRD1A-208ENST00000589050 MAGEB2O15479 319 aa17.23■□□□□ 0.35
RPRD1A-208ENST00000589050 POLR2DO15514 142 aaKnown RBP17.23■□□□□ 0.35
RPRD1A-208ENST00000589050 GADD45BO75293 160 aaPredicted RBP17.23■□□□□ 0.35
RPRD1A-208ENST00000589050 PRPF40AO75400 957 aaKnown RBP17.23■□□□□ 0.35
RPRD1A-208ENST00000589050 MAFO75444 373 aaPredicted RBP17.23■□□□□ 0.35
RPRD1A-208ENST00000589050 CD4P01730 458 aa17.23■□□□□ 0.35
RPRD1A-208ENST00000589050 PLA2G4BP0C869 781 aa17.23■□□□□ 0.35
RPRD1A-208ENST00000589050 CYP2C9P11712 490 aa17.23■□□□□ 0.35
RPRD1A-208ENST00000589050 RFC5P40937 340 aa17.23■□□□□ 0.35
RPRD1A-208ENST00000589050 POLGP54098 1239 aaPredicted RBP17.23■□□□□ 0.35
RPRD1A-208ENST00000589050 PADI6Q6TGC4 694 aa17.23■□□□□ 0.35
RPRD1A-208ENST00000589050 RUFY4Q6ZNE9 571 aa17.23■□□□□ 0.35
RPRD1A-208ENST00000589050 METTL13Q8N6R0 699 aa17.23■□□□□ 0.35
RPRD1A-208ENST00000589050 SLC7A3Q8WY07 619 aa17.23■□□□□ 0.35
RPRD1A-208ENST00000589050 LARP4BQ92615 738 aaKnown RBP17.23■□□□□ 0.35
RPRD1A-208ENST00000589050 DHX58Q96C10 678 aa17.23■□□□□ 0.35
RPRD1A-208ENST00000589050 CTAGE1Q96RT6 745 aa17.23■□□□□ 0.35
RPRD1A-208ENST00000589050 BMP2KQ9NSY1 1161 aaPredicted RBP17.23■□□□□ 0.35
RPRD1A-208ENST00000589050 BLOC1S4Q9NUP1 217 aa17.23■□□□□ 0.35
RPRD1A-208ENST00000589050 HPSEQ9Y251 543 aa17.23■□□□□ 0.35
RPRD1A-208ENST00000589050 PCDHA2Q9Y5H9 948 aa17.23■□□□□ 0.35
RPRD1A-208ENST00000589050 USO1O60763 962 aaKnown RBP17.22■□□□□ 0.35
RPRD1A-208ENST00000589050 CAPN15O75808 1086 aa17.22■□□□□ 0.35
RPRD1A-208ENST00000589050 DGAT1O75907 488 aa17.22■□□□□ 0.35
RPRD1A-208ENST00000589050 NDUFA8P51970 172 aa17.22■□□□□ 0.35
RPRD1A-208ENST00000589050 FAAP100Q0VG06 881 aa17.22■□□□□ 0.35
RPRD1A-208ENST00000589050 PTK7Q13308 1070 aa17.22■□□□□ 0.35
RPRD1A-208ENST00000589050 DHX8Q14562 1220 aaKnown RBP17.22■□□□□ 0.35
RPRD1A-208ENST00000589050 MCM6Q14566 821 aa17.22■□□□□ 0.35
RPRD1A-208ENST00000589050 EMC2Q15006 297 aa17.22■□□□□ 0.35
RPRD1A-208ENST00000589050 NAALADL2Q58DX5 795 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms