RNA–Protein interactions for RNA: ENST00000588542.5

DDX39A-207, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 1,297 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-207ENST00000588542 DKC1O60832 514 aaKnown RBP eCLIP22.65■■□□□ 1.22
DDX39A-207ENST00000588542 NBNO60934 754 aa22.65■■□□□ 1.22
DDX39A-207ENST00000588542 CTSHP09668 335 aa22.65■■□□□ 1.22
DDX39A-207ENST00000588542 RSPH10BP0C881 870 aa22.65■■□□□ 1.22
DDX39A-207ENST00000588542 MGAT3Q09327 533 aa22.65■■□□□ 1.22
DDX39A-207ENST00000588542 FAM173BQ6P4H8 233 aa22.65■■□□□ 1.22
DDX39A-207ENST00000588542 ZNF365Q70YC5 407 aa22.65■■□□□ 1.22
DDX39A-207ENST00000588542 RPUSD2Q8IZ73 545 aaKnown RBP22.65■■□□□ 1.22
DDX39A-207ENST00000588542 IGSF22Q8N9C0 903 aa22.65■■□□□ 1.22
DDX39A-207ENST00000588542 NEK9Q8TD19 979 aa22.65■■□□□ 1.22
DDX39A-207ENST00000588542 SH2D3AQ9BRG2 576 aa22.65■■□□□ 1.22
DDX39A-207ENST00000588542 OSBPL7Q9BZF2 842 aa22.65■■□□□ 1.22
DDX39A-207ENST00000588542 FAM49AQ9H0Q0 323 aaPredicted RBP22.65■■□□□ 1.22
DDX39A-207ENST00000588542 ZSWIM4Q9H7M6 989 aa22.65■■□□□ 1.22
DDX39A-207ENST00000588542 ZBTB39O15060 712 aa22.64■■□□□ 1.21
DDX39A-207ENST00000588542 PARNO95453 639 aaKnown RBP22.64■■□□□ 1.21
DDX39A-207ENST00000588542 CHRNA1P02708 482 aa22.64■■□□□ 1.21
DDX39A-207ENST00000588542 CXCL10P02778 98 aa22.64■■□□□ 1.21
DDX39A-207ENST00000588542 SPATA31C1P0DKV0 1188 aa22.64■■□□□ 1.21
DDX39A-207ENST00000588542 PDIA5Q14554 519 aa22.64■■□□□ 1.21
DDX39A-207ENST00000588542 TMEM266Q2M3C6 531 aa22.64■■□□□ 1.21
DDX39A-207ENST00000588542 PLA2G4FQ68DD2 849 aa22.64■■□□□ 1.21
DDX39A-207ENST00000588542 TPH2Q8IWU9 490 aa22.64■■□□□ 1.21
DDX39A-207ENST00000588542 KIAA0319LQ8IZA0 1049 aa22.64■■□□□ 1.21
DDX39A-207ENST00000588542 LINC01465Q8N7H1 131 aa22.64■■□□□ 1.21
DDX39A-207ENST00000588542 ZSCAN16Q9H4T2 348 aaPredicted RBP22.64■■□□□ 1.21
DDX39A-207ENST00000588542 PTPRSQ13332 1948 aa22.63■■□□□ 1.21
DDX39A-207ENST00000588542 MAGEB2O15479 319 aa22.63■■□□□ 1.21
DDX39A-207ENST00000588542 MED24O75448 989 aa22.63■■□□□ 1.21
DDX39A-207ENST00000588542 LYPLA2O95372 231 aa22.63■■□□□ 1.21
DDX39A-207ENST00000588542 PFKMP08237 780 aa22.63■■□□□ 1.21
DDX39A-207ENST00000588542 MTERF2Q49AM1 385 aa22.63■■□□□ 1.21
DDX39A-207ENST00000588542 HABP4Q5JVS0 413 aaKnown RBP22.63■■□□□ 1.21
DDX39A-207ENST00000588542 PSRC1Q6PGN9 363 aaPredicted RBP22.63■■□□□ 1.21
DDX39A-207ENST00000588542 RSPH3Q86UC2 560 aa22.63■■□□□ 1.21
DDX39A-207ENST00000588542 ZNF579Q8NAF0 562 aaKnown RBP22.63■■□□□ 1.21
DDX39A-207ENST00000588542 MICAL3Q7RTP6 2002 aa22.62■■□□□ 1.21
DDX39A-207ENST00000588542 FGBP02675 491 aa22.62■■□□□ 1.21
DDX39A-207ENST00000588542 RPLP2P05387 115 aaKnown RBP22.62■■□□□ 1.21
DDX39A-207ENST00000588542 YWHABP31946 246 aaKnown RBP22.62■■□□□ 1.21
DDX39A-207ENST00000588542 NPEPPSP55786 919 aa22.62■■□□□ 1.21
DDX39A-207ENST00000588542 MRPS6P82932 125 aaKnown RBP22.62■■□□□ 1.21
DDX39A-207ENST00000588542 PKP1Q13835 747 aa22.62■■□□□ 1.21
DDX39A-207ENST00000588542 SF3A1Q15459 793 aaKnown RBP22.62■■□□□ 1.21
DDX39A-207ENST00000588542 TCTN1Q2MV58 587 aa22.62■■□□□ 1.21
DDX39A-207ENST00000588542 RASIP1Q5U651 963 aa22.62■■□□□ 1.21
DDX39A-207ENST00000588542 DTHD1Q6ZMT9 781 aa22.62■■□□□ 1.21
DDX39A-207ENST00000588542 CATSPER3Q86XQ3 398 aa22.62■■□□□ 1.21
DDX39A-207ENST00000588542 POLR3CQ9BUI4 534 aaPredicted RBP22.62■■□□□ 1.21
DDX39A-207ENST00000588542 FTOQ9C0B1 505 aaKnown RBP eCLIP22.62■■□□□ 1.21
DDX39A-207ENST00000588542 TUFT1Q9NNX1 390 aa22.62■■□□□ 1.21
DDX39A-207ENST00000588542 CYP26B1Q9NR63 512 aa22.62■■□□□ 1.21
DDX39A-207ENST00000588542 LRWD1Q9UFC0 647 aa22.62■■□□□ 1.21
DDX39A-207ENST00000588542 CDY2AQ9Y6F7 541 aa22.62■■□□□ 1.21
DDX39A-207ENST00000588542 IGKV6-21A0A0C4DH24 114 aa22.61■■□□□ 1.21
DDX39A-207ENST00000588542 PDIA4P13667 645 aaKnown RBP22.61■■□□□ 1.21
DDX39A-207ENST00000588542 TBC1D8BQ0IIM8 1120 aa22.61■■□□□ 1.21
DDX39A-207ENST00000588542 ARL6IP4Q66PJ3 421 aaKnown RBP22.61■■□□□ 1.21
DDX39A-207ENST00000588542 EFCAB12Q6NXP0 572 aa22.61■■□□□ 1.21
DDX39A-207ENST00000588542 NME8Q8N427 588 aa22.61■■□□□ 1.21
DDX39A-207ENST00000588542 LRRC71Q8N4P6 559 aa22.61■■□□□ 1.21
DDX39A-207ENST00000588542 HERVK_113Q902F9 699 aa22.61■■□□□ 1.21
DDX39A-207ENST00000588542 CLIC4Q9Y696 253 aa22.61■■□□□ 1.21
DDX39A-207ENST00000588542 GBF1Q92538 1859 aa22.6■■□□□ 1.21
DDX39A-207ENST00000588542 ZSCAN22P10073 491 aaPredicted RBP22.6■■□□□ 1.21
DDX39A-207ENST00000588542 RPA1P27694 616 aa22.6■■□□□ 1.21
DDX39A-207ENST00000588542 CLCN3P51790 818 aa22.6■■□□□ 1.21
DDX39A-207ENST00000588542 TMEM62Q0P6H9 643 aa22.6■■□□□ 1.21
DDX39A-207ENST00000588542 MKRN4PQ13434 485 aaPredicted RBP22.6■■□□□ 1.21
DDX39A-207ENST00000588542 BECN1Q14457 450 aa22.6■■□□□ 1.21
DDX39A-207ENST00000588542 PTPAQ15257 358 aa22.6■■□□□ 1.21
DDX39A-207ENST00000588542 ECM1Q16610 540 aa22.6■■□□□ 1.21
DDX39A-207ENST00000588542 OTOP2Q7RTS6 562 aa22.6■■□□□ 1.21
DDX39A-207ENST00000588542 METTL13Q8N6R0 699 aa22.6■■□□□ 1.21
DDX39A-207ENST00000588542 ERMNQ8TAM6 284 aa22.6■■□□□ 1.21
DDX39A-207ENST00000588542 RNPC3Q96LT9 517 aaKnown RBP22.6■■□□□ 1.21
DDX39A-207ENST00000588542 A0A087WWV3 80 aa22.59■■□□□ 1.21
DDX39A-207ENST00000588542 PP2D1A8MPX8 630 aa22.59■■□□□ 1.21
DDX39A-207ENST00000588542 MAFO75444 373 aaPredicted RBP22.59■■□□□ 1.21
DDX39A-207ENST00000588542 BMP15O95972 392 aa22.59■■□□□ 1.21
DDX39A-207ENST00000588542 FOXD4L5Q5VV16 416 aaPredicted RBP22.59■■□□□ 1.21
DDX39A-207ENST00000588542 IER5Q5VY09 327 aa22.59■■□□□ 1.21
DDX39A-207ENST00000588542 OTUD6AQ7L8S5 288 aa22.59■■□□□ 1.21
DDX39A-207ENST00000588542 PIGOQ8TEQ8 1089 aa22.59■■□□□ 1.21
DDX39A-207ENST00000588542 FOXD4L4Q8WXT5 416 aaPredicted RBP22.59■■□□□ 1.21
DDX39A-207ENST00000588542 CEP170P1Q96L14 293 aa22.59■■□□□ 1.21
DDX39A-207ENST00000588542 RAB34Q9BZG1 259 aa22.59■■□□□ 1.21
DDX39A-207ENST00000588542 ANKEF1Q9NU02 776 aa22.59■■□□□ 1.21
DDX39A-207ENST00000588542 CXXC1Q9P0U4 656 aaPredicted RBP22.59■■□□□ 1.21
DDX39A-207ENST00000588542 TRPV2Q9Y5S1 764 aa22.59■■□□□ 1.21
DDX39A-207ENST00000588542 KDM3AQ9Y4C1 1321 aa22.58■■□□□ 1.21
DDX39A-207ENST00000588542 VWA3AA6NCI4 1184 aa22.58■■□□□ 1.21
DDX39A-207ENST00000588542 VTNP04004 478 aa22.58■■□□□ 1.21
DDX39A-207ENST00000588542 CDC25AP30304 524 aa22.58■■□□□ 1.21
DDX39A-207ENST00000588542 DRP2Q13474 957 aa22.58■■□□□ 1.21
DDX39A-207ENST00000588542 LRIT3Q3SXY7 679 aa22.58■■□□□ 1.21
DDX39A-207ENST00000588542 PLEKHG4Q58EX7 1191 aa22.58■■□□□ 1.21
DDX39A-207ENST00000588542 XKR9Q5GH70 373 aa22.58■■□□□ 1.21
DDX39A-207ENST00000588542 FBXO47Q5MNV8 452 aa22.58■■□□□ 1.21
DDX39A-207ENST00000588542 CNKSR3Q6P9H4 555 aa22.58■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms