RNA–Protein interactions for RNA: ENST00000588507.5

TPM4-210, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-210ENST00000588507 SCG2P13521 617 aa8.25□□□□□ -1.09
TPM4-210ENST00000588507 EDNRBP24530 442 aa8.25□□□□□ -1.09
TPM4-210ENST00000588507 HOXC8P31273 242 aa8.25□□□□□ -1.09
TPM4-210ENST00000588507 PPM1AP35813 382 aa8.25□□□□□ -1.09
TPM4-210ENST00000588507 ABCG1P45844 678 aa8.25□□□□□ -1.09
TPM4-210ENST00000588507 RAP1GAPP47736 663 aa8.25□□□□□ -1.09
TPM4-210ENST00000588507 MRPL12P52815 198 aaKnown RBP8.25□□□□□ -1.09
TPM4-210ENST00000588507 C4orf17Q53FE4 359 aa8.25□□□□□ -1.09
TPM4-210ENST00000588507 TPRG1Q6ZUI0 275 aa8.25□□□□□ -1.09
TPM4-210ENST00000588507 CACNA2D4Q7Z3S7 1137 aa8.25□□□□□ -1.09
TPM4-210ENST00000588507 SCUBE3Q8IX30 993 aa8.25□□□□□ -1.09
TPM4-210ENST00000588507 RNPEPQ9H4A4 650 aa8.25□□□□□ -1.09
TPM4-210ENST00000588507 CWH43Q9H720 699 aa8.25□□□□□ -1.09
TPM4-210ENST00000588507 TMEM9BQ9NQ34 198 aa8.25□□□□□ -1.09
TPM4-210ENST00000588507 NXF1Q9UBU9 619 aaKnown RBP8.25□□□□□ -1.09
TPM4-210ENST00000588507 DDX41Q9UJV9 622 aaKnown RBP8.25□□□□□ -1.09
TPM4-210ENST00000588507 PAXBP1Q9Y5B6 917 aa8.25□□□□□ -1.09
TPM4-210ENST00000588507 PCDHB7Q9Y5E2 793 aa8.25□□□□□ -1.09
TPM4-210ENST00000588507 CACNA1EQ15878 2313 aa8.25□□□□□ -1.09
TPM4-210ENST00000588507 CLUHO75153 1309 aa8.25□□□□□ -1.09
TPM4-210ENST00000588507 SPAARA0A1B0GVQ0 90 aa8.24□□□□□ -1.09
TPM4-210ENST00000588507 B8ZZF3 427 aa8.24□□□□□ -1.09
TPM4-210ENST00000588507 PPFIA4O75335 1185 aa8.24□□□□□ -1.09
TPM4-210ENST00000588507 SMIM10L2AP0DMW4 78 aa8.24□□□□□ -1.09
TPM4-210ENST00000588507 SMIM10L2BP0DMW5 78 aa8.24□□□□□ -1.09
TPM4-210ENST00000588507 CYP2D6P10635 497 aa8.24□□□□□ -1.09
TPM4-210ENST00000588507 GNAT1P11488 350 aa8.24□□□□□ -1.09
TPM4-210ENST00000588507 PDE4AP27815 886 aa8.24□□□□□ -1.09
TPM4-210ENST00000588507 CDK8P49336 464 aa8.24□□□□□ -1.09
TPM4-210ENST00000588507 SATB1Q01826 763 aa8.24□□□□□ -1.09
TPM4-210ENST00000588507 HEATR6Q6AI08 1181 aaKnown RBP8.24□□□□□ -1.09
TPM4-210ENST00000588507 TSHZ1Q6ZSZ6 1077 aa8.24□□□□□ -1.09
TPM4-210ENST00000588507 RAB44Q7Z6P3 723 aaPredicted RBP8.24□□□□□ -1.09
TPM4-210ENST00000588507 PPFIBP1Q86W92 1011 aa8.24□□□□□ -1.09
TPM4-210ENST00000588507 RPAP2Q8IXW5 612 aaPredicted RBP8.24□□□□□ -1.09
TPM4-210ENST00000588507 PPTC7Q8NI37 304 aa8.24□□□□□ -1.09
TPM4-210ENST00000588507 EMID1Q96A84 441 aaPredicted RBP8.24□□□□□ -1.09
TPM4-210ENST00000588507 RPP25Q9BUL9 199 aaKnown RBP8.24□□□□□ -1.09
TPM4-210ENST00000588507 PRORYQ9H606 182 aa8.24□□□□□ -1.09
TPM4-210ENST00000588507 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.24□□□□□ -1.097e-8■■■■□ 22.9
TPM4-210ENST00000588507 HCSTQ9UBK5 93 aa8.24□□□□□ -1.09
TPM4-210ENST00000588507 PA2G4Q9UQ80 394 aaKnown RBP8.24□□□□□ -1.09
TPM4-210ENST00000588507 C2orf16Q68DN1 1984 aa8.24□□□□□ -1.09
TPM4-210ENST00000588507 SPAG17Q6Q759 2223 aa8.23□□□□□ -1.09
TPM4-210ENST00000588507 MYH8P13535 1937 aa8.23□□□□□ -1.09
TPM4-210ENST00000588507 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.23□□□□□ -1.09
TPM4-210ENST00000588507 PTPDC1A2A3K4 754 aa8.23□□□□□ -1.09
TPM4-210ENST00000588507 IBSPP21815 317 aaPredicted RBP8.23□□□□□ -1.09
TPM4-210ENST00000588507 ATP8B2P98198 1209 aa8.23□□□□□ -1.09
TPM4-210ENST00000588507 TFCP2Q12800 502 aa8.23□□□□□ -1.09
TPM4-210ENST00000588507 LAMC2Q13753 1193 aa8.23□□□□□ -1.09
TPM4-210ENST00000588507 GIT2Q14161 759 aa8.23□□□□□ -1.09
TPM4-210ENST00000588507 KRTAP21-3Q3LHN1 58 aa8.23□□□□□ -1.09
TPM4-210ENST00000588507 FBXO47Q5MNV8 452 aa8.23□□□□□ -1.09
TPM4-210ENST00000588507 KCNT2Q6UVM3 1135 aa8.23□□□□□ -1.09
TPM4-210ENST00000588507 CYP26C1Q6V0L0 522 aa8.23□□□□□ -1.09
TPM4-210ENST00000588507 CCNI2Q6ZMN8 369 aaPredicted RBP8.23□□□□□ -1.09
TPM4-210ENST00000588507 ST13P5Q8NFI4 369 aaPredicted RBP8.23□□□□□ -1.09
TPM4-210ENST00000588507 CMASQ8NFW8 434 aaPredicted RBP8.23□□□□□ -1.09
TPM4-210ENST00000588507 PIP4K2CQ8TBX8 421 aa8.23□□□□□ -1.09
TPM4-210ENST00000588507 ZNF558Q96NG5 402 aa8.23□□□□□ -1.09
TPM4-210ENST00000588507 SPG21Q9NZD8 308 aa8.23□□□□□ -1.09
TPM4-210ENST00000588507 NYAP2Q9P242 653 aa8.23□□□□□ -1.09
TPM4-210ENST00000588507 DKK4Q9UBT3 224 aa8.23□□□□□ -1.09
TPM4-210ENST00000588507 TMEM232C9JQI7 657 aa8.22□□□□□ -1.09
TPM4-210ENST00000588507 SLC28A2O43868 658 aa8.22□□□□□ -1.09
TPM4-210ENST00000588507 VAMP4O75379 141 aa8.22□□□□□ -1.09
TPM4-210ENST00000588507 CALML3P27482 149 aa8.22□□□□□ -1.09
TPM4-210ENST00000588507 CD52P31358 61 aa8.22□□□□□ -1.09
TPM4-210ENST00000588507 STAT2P52630 851 aa8.22□□□□□ -1.09
TPM4-210ENST00000588507 MGAT3Q09327 533 aa8.22□□□□□ -1.09
TPM4-210ENST00000588507 SERINC3Q13530 473 aa8.22□□□□□ -1.09
TPM4-210ENST00000588507 ZNF423Q2M1K9 1284 aa8.22□□□□□ -1.09
TPM4-210ENST00000588507 UAP1L1Q3KQV9 507 aa8.22□□□□□ -1.09
TPM4-210ENST00000588507 SEPT14Q6ZU15 432 aa8.22□□□□□ -1.09
TPM4-210ENST00000588507 FAM160B2Q86V87 743 aa8.22□□□□□ -1.09
TPM4-210ENST00000588507 DNERQ8NFT8 737 aa8.22□□□□□ -1.09
TPM4-210ENST00000588507 CHURC1Q8WUH1 139 aa8.22□□□□□ -1.09
TPM4-210ENST00000588507 CRNKL1Q9BZJ0 848 aaKnown RBP8.22□□□□□ -1.09
TPM4-210ENST00000588507 USP44Q9H0E7 712 aa8.22□□□□□ -1.09
TPM4-210ENST00000588507 COPRSQ9NQ92 184 aa8.22□□□□□ -1.09
TPM4-210ENST00000588507 PIH1D3Q9NQM4 214 aaKnown RBP8.22□□□□□ -1.09
TPM4-210ENST00000588507 TCP11L1Q9NUJ3 509 aa8.22□□□□□ -1.09
TPM4-210ENST00000588507 IL17BQ9UHF5 180 aa8.22□□□□□ -1.09
TPM4-210ENST00000588507 CCPG1Q9ULG6 757 aa8.22□□□□□ -1.09
TPM4-210ENST00000588507 SALL3Q9BXA9 1300 aa8.22□□□□□ -1.09
TPM4-210ENST00000588507 COL12A1Q99715 3063 aa8.21□□□□□ -1.09
TPM4-210ENST00000588507 ASCC3Q8N3C0 2202 aaKnown RBP8.21□□□□□ -1.09
TPM4-210ENST00000588507 LNP1A1A4G5 178 aa8.21□□□□□ -1.1
TPM4-210ENST00000588507 CDX4O14627 284 aaPredicted RBP8.21□□□□□ -1.1
TPM4-210ENST00000588507 BMP3P12645 472 aa8.21□□□□□ -1.1
TPM4-210ENST00000588507 SARSP49591 514 aaKnown RBP8.21□□□□□ -1.1
TPM4-210ENST00000588507 IKQ13123 557 aaPredicted RBP8.21□□□□□ -1.1
TPM4-210ENST00000588507 WTAPQ15007 396 aa8.21□□□□□ -1.1
TPM4-210ENST00000588507 FAM102BQ5T8I3 360 aa8.21□□□□□ -1.1
TPM4-210ENST00000588507 KBTBD6Q86V97 674 aa8.21□□□□□ -1.1
TPM4-210ENST00000588507 WDR5BQ86VZ2 330 aa8.21□□□□□ -1.1
TPM4-210ENST00000588507 FGF14Q92915 247 aa8.21□□□□□ -1.1
TPM4-210ENST00000588507 RIOK1Q9BRS2 568 aaKnown RBP8.21□□□□□ -1.1
TPM4-210ENST00000588507 C16orf70Q9BSU1 422 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms