RNA–Protein interactions for RNA: ENST00000587988.5

SMARCA4-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 552 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-213ENST00000587988 TLE2Q04725 743 aa11.96□□□□□ -0.49
SMARCA4-213ENST00000587988 PTPN11Q06124 597 aaPredicted RBP11.96□□□□□ -0.49
SMARCA4-213ENST00000587988 PTGISQ16647 500 aa11.96□□□□□ -0.49
SMARCA4-213ENST00000587988 XKR9Q5GH70 373 aa11.96□□□□□ -0.49
SMARCA4-213ENST00000587988 ZNF484Q5JVG2 852 aa11.96□□□□□ -0.49
SMARCA4-213ENST00000587988 ANKRD33Q7Z3H0 272 aa11.96□□□□□ -0.49
SMARCA4-213ENST00000587988 FAM126BQ8IXS8 530 aa11.96□□□□□ -0.49
SMARCA4-213ENST00000587988 CALML4Q96GE6 196 aa11.96□□□□□ -0.49
SMARCA4-213ENST00000587988 CDK5RAP3Q96JB5 506 aa11.96□□□□□ -0.49
SMARCA4-213ENST00000587988 CEP170P1Q96L14 293 aa11.96□□□□□ -0.49
SMARCA4-213ENST00000587988 NACC1Q96RE7 527 aa11.96□□□□□ -0.49
SMARCA4-213ENST00000587988 CYP26B1Q9NR63 512 aa11.96□□□□□ -0.49
SMARCA4-213ENST00000587988 BLOC1S4Q9NUP1 217 aa11.96□□□□□ -0.49
SMARCA4-213ENST00000587988 ATP11BQ9Y2G3 1177 aa11.96□□□□□ -0.49
SMARCA4-213ENST00000587988 ARID2Q68CP9 1835 aa11.95□□□□□ -0.5
SMARCA4-213ENST00000587988 COL1A2P08123 1366 aa11.95□□□□□ -0.5
SMARCA4-213ENST00000587988 KDM3AQ9Y4C1 1321 aa11.95□□□□□ -0.5
SMARCA4-213ENST00000587988 A0A1B0GVL5 298 aa11.95□□□□□ -0.5
SMARCA4-213ENST00000587988 MBLAC1A4D2B0 266 aaPredicted RBP11.95□□□□□ -0.5
SMARCA4-213ENST00000587988 RRN3P2A6NIE6 340 aa11.95□□□□□ -0.5
SMARCA4-213ENST00000587988 RBAK-RBAKDNI3L0D1 243 aa11.95□□□□□ -0.5
SMARCA4-213ENST00000587988 SLC26A4O43511 780 aa11.95□□□□□ -0.5
SMARCA4-213ENST00000587988 GADD45BO75293 160 aaPredicted RBP11.95□□□□□ -0.5
SMARCA4-213ENST00000587988 CAPN15O75808 1086 aa11.95□□□□□ -0.5
SMARCA4-213ENST00000587988 C22orf31O95567 290 aa11.95□□□□□ -0.5
SMARCA4-213ENST00000587988 CD4P01730 458 aa11.95□□□□□ -0.5
SMARCA4-213ENST00000587988 XRCC6P12956 609 aaKnown RBP eCLIP11.95□□□□□ -0.5
SMARCA4-213ENST00000587988 CMA1P23946 247 aa11.95□□□□□ -0.5
SMARCA4-213ENST00000587988 KLRC1P26715 233 aa11.95□□□□□ -0.5
SMARCA4-213ENST00000587988 RARRES1P49788 294 aa11.95□□□□□ -0.5
SMARCA4-213ENST00000587988 FAAP100Q0VG06 881 aa11.95□□□□□ -0.5
SMARCA4-213ENST00000587988 NAALADL2Q58DX5 795 aa11.95□□□□□ -0.5
SMARCA4-213ENST00000587988 MTHFD1LQ6UB35 978 aa11.95□□□□□ -0.5
SMARCA4-213ENST00000587988 RUFY4Q6ZNE9 571 aa11.95□□□□□ -0.5
SMARCA4-213ENST00000587988 OTUD6AQ7L8S5 288 aa11.95□□□□□ -0.5
SMARCA4-213ENST00000587988 PDILTQ8N807 584 aa11.95□□□□□ -0.5
SMARCA4-213ENST00000587988 TMEM87AQ8NBN3 555 aa11.95□□□□□ -0.5
SMARCA4-213ENST00000587988 RASSF8Q8NHQ8 419 aa11.95□□□□□ -0.5
SMARCA4-213ENST00000587988 WNT8BQ93098 351 aa11.95□□□□□ -0.5
SMARCA4-213ENST00000587988 SEZ6LQ9BYH1 1024 aa11.95□□□□□ -0.5
SMARCA4-213ENST00000587988 NT5C3AQ9H0P0 336 aa11.95□□□□□ -0.5
SMARCA4-213ENST00000587988 BHMT2Q9H2M3 363 aa11.95□□□□□ -0.5
SMARCA4-213ENST00000587988 GOLPH3LQ9H4A5 285 aa11.95□□□□□ -0.5
SMARCA4-213ENST00000587988 ANKEF1Q9NU02 776 aa11.95□□□□□ -0.5
SMARCA4-213ENST00000587988 PCDH10Q9P2E7 1040 aa11.95□□□□□ -0.5
SMARCA4-213ENST00000587988 CCDC39Q9UFE4 941 aa11.95□□□□□ -0.5
SMARCA4-213ENST00000587988 DBR1Q9UK59 544 aaKnown RBP11.95□□□□□ -0.5
SMARCA4-213ENST00000587988 DNM3Q9UQ16 869 aa11.95□□□□□ -0.5
SMARCA4-213ENST00000587988 EVPLQ92817 2033 aa11.94□□□□□ -0.5
SMARCA4-213ENST00000587988 MROH7Q68CQ1 1323 aa11.94□□□□□ -0.5
SMARCA4-213ENST00000587988 A0A1W2PQ27 194 aa11.94□□□□□ -0.5
SMARCA4-213ENST00000587988 A0A1W2PQ64 194 aa11.94□□□□□ -0.5
SMARCA4-213ENST00000587988 A0A1W2PQD8 194 aa11.94□□□□□ -0.5
SMARCA4-213ENST00000587988 EYA4O95677 639 aa11.94□□□□□ -0.5
SMARCA4-213ENST00000587988 GNAT1P11488 350 aa11.94□□□□□ -0.5
SMARCA4-213ENST00000587988 CYP2C9P11712 490 aa11.94□□□□□ -0.5
SMARCA4-213ENST00000587988 PFKFB1P16118 471 aa11.94□□□□□ -0.5
SMARCA4-213ENST00000587988 TXLNAP40222 546 aa11.94□□□□□ -0.5
SMARCA4-213ENST00000587988 RRAGBQ5VZM2 374 aa11.94□□□□□ -0.5
SMARCA4-213ENST00000587988 LRRC71Q8N4P6 559 aa11.94□□□□□ -0.5
SMARCA4-213ENST00000587988 FSIP1Q8NA03 581 aa11.94□□□□□ -0.5
SMARCA4-213ENST00000587988 DHX38Q92620 1227 aaKnown RBP11.94□□□□□ -0.5
SMARCA4-213ENST00000587988 RAD54LQ92698 747 aa11.94□□□□□ -0.5
SMARCA4-213ENST00000587988 TOX2Q96NM4 488 aa11.94□□□□□ -0.5
SMARCA4-213ENST00000587988 BMP2KQ9NSY1 1161 aaPredicted RBP11.94□□□□□ -0.5
SMARCA4-213ENST00000587988 FAM13BQ9NYF5 915 aa11.94□□□□□ -0.5
SMARCA4-213ENST00000587988 TUBE1Q9UJT0 475 aa11.94□□□□□ -0.5
SMARCA4-213ENST00000587988 HPSEQ9Y251 543 aa11.94□□□□□ -0.5
SMARCA4-213ENST00000587988 MKI67P46013 3256 aaKnown RBP11.93□□□□□ -0.5
SMARCA4-213ENST00000587988 IGKV6-21A0A0C4DH24 114 aa11.93□□□□□ -0.5
SMARCA4-213ENST00000587988 FAM237AA0A1B0GTK4 181 aa11.93□□□□□ -0.5
SMARCA4-213ENST00000587988 DCDC2CA8MYV0 355 aa11.93□□□□□ -0.5
SMARCA4-213ENST00000587988 POLR2DO15514 142 aaKnown RBP11.93□□□□□ -0.5
SMARCA4-213ENST00000587988 PRPF40AO75400 957 aaKnown RBP11.93□□□□□ -0.5
SMARCA4-213ENST00000587988 MAFO75444 373 aaPredicted RBP11.93□□□□□ -0.5
SMARCA4-213ENST00000587988 PLA2G4BP0C869 781 aa11.93□□□□□ -0.5
SMARCA4-213ENST00000587988 NDUFA8P51970 172 aa11.93□□□□□ -0.5
SMARCA4-213ENST00000587988 SLC12A3P55017 1021 aa11.93□□□□□ -0.5
SMARCA4-213ENST00000587988 TBC1D8BQ0IIM8 1120 aa11.93□□□□□ -0.5
SMARCA4-213ENST00000587988 MKRN4PQ13434 485 aaPredicted RBP11.93□□□□□ -0.5
SMARCA4-213ENST00000587988 DRP2Q13474 957 aa11.93□□□□□ -0.5
SMARCA4-213ENST00000587988 DHX8Q14562 1220 aaKnown RBP11.93□□□□□ -0.5
SMARCA4-213ENST00000587988 MCM6Q14566 821 aa11.93□□□□□ -0.5
SMARCA4-213ENST00000587988 E2F4Q16254 413 aa11.93□□□□□ -0.5
SMARCA4-213ENST00000587988 CSPP1Q1MSJ5 1256 aa11.93□□□□□ -0.5
SMARCA4-213ENST00000587988 EFCAB12Q6NXP0 572 aa11.93□□□□□ -0.5
SMARCA4-213ENST00000587988 SH3RF1Q7Z6J0 888 aa11.93□□□□□ -0.5
SMARCA4-213ENST00000587988 SERINC5Q86VE9 423 aa11.93□□□□□ -0.5
SMARCA4-213ENST00000587988 LINC01465Q8N7H1 131 aa11.93□□□□□ -0.5
SMARCA4-213ENST00000587988 SYT2Q8N9I0 419 aaPredicted RBP11.93□□□□□ -0.5
SMARCA4-213ENST00000587988 MRPS27Q92552 414 aaKnown RBP11.93□□□□□ -0.5
SMARCA4-213ENST00000587988 DHX58Q96C10 678 aa11.93□□□□□ -0.5
SMARCA4-213ENST00000587988 DHX33Q9H6R0 707 aaKnown RBP11.93□□□□□ -0.5
SMARCA4-213ENST00000587988 POLD4Q9HCU8 107 aa11.93□□□□□ -0.5
SMARCA4-213ENST00000587988 XPNPEP1Q9NQW7 623 aa11.93□□□□□ -0.5
SMARCA4-213ENST00000587988 PDLIM7Q9NR12 457 aa11.93□□□□□ -0.5
SMARCA4-213ENST00000587988 KCNH3Q9ULD8 1083 aa11.93□□□□□ -0.5
SMARCA4-213ENST00000587988 PCDHA2Q9Y5H9 948 aa11.93□□□□□ -0.5
SMARCA4-213ENST00000587988 ARHGEF35A5YM69 484 aa11.92□□□□□ -0.5
SMARCA4-213ENST00000587988 GOLGA6L4A6NEF3 574 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms