RNA–Protein interactions for RNA: ENST00000587169.5

CIRBP-212, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 3,028 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-212ENST00000587169 SIX2Q9NPC8 291 aa18.38■□□□□ 0.53
CIRBP-212ENST00000587169 GCNT4Q9P109 453 aa18.38■□□□□ 0.53
CIRBP-212ENST00000587169 SERPINB13Q9UIV8 391 aa18.38■□□□□ 0.53
CIRBP-212ENST00000587169 COL5A3P25940 1745 aaPredicted RBP18.38■□□□□ 0.53
CIRBP-212ENST00000587169 SHMT1P34896 483 aa18.38■□□□□ 0.53
CIRBP-212ENST00000587169 TCP10Q12799 353 aa18.38■□□□□ 0.53
CIRBP-212ENST00000587169 EPHA7Q15375 998 aa18.38■□□□□ 0.53
CIRBP-212ENST00000587169 ZFPM1Q8IX07 1006 aa18.38■□□□□ 0.53
CIRBP-212ENST00000587169 GPATCH11Q8N954 259 aa18.38■□□□□ 0.53
CIRBP-212ENST00000587169 PBKQ96KB5 322 aa18.38■□□□□ 0.53
CIRBP-212ENST00000587169 KCNMB3Q9NPA1 279 aa18.38■□□□□ 0.53
CIRBP-212ENST00000587169 MYH4Q9Y623 1939 aa18.37■□□□□ 0.53
CIRBP-212ENST00000587169 GAKO14976 1311 aa18.37■□□□□ 0.53
CIRBP-212ENST00000587169 AFF2P51816 1311 aa18.37■□□□□ 0.53
CIRBP-212ENST00000587169 A6NNZ2 444 aa18.37■□□□□ 0.53
CIRBP-212ENST00000587169 H2AFZP0C0S5 128 aa18.37■□□□□ 0.53
CIRBP-212ENST00000587169 MAGOHP61326 146 aaKnown RBP18.37■□□□□ 0.53
CIRBP-212ENST00000587169 DHX9Q08211 1270 aaKnown RBP18.37■□□□□ 0.53
CIRBP-212ENST00000587169 EDRF1Q3B7T1 1238 aa18.37■□□□□ 0.53
CIRBP-212ENST00000587169 TUBB8Q3ZCM7 444 aa18.37■□□□□ 0.53
CIRBP-212ENST00000587169 H2AFVQ71UI9 128 aa18.37■□□□□ 0.53
CIRBP-212ENST00000587169 GLYCTKQ8IVS8 523 aa18.37■□□□□ 0.53
CIRBP-212ENST00000587169 MAGOHBQ96A72 148 aaKnown RBP18.37■□□□□ 0.53
CIRBP-212ENST00000587169 CD248Q9HCU0 757 aa18.37■□□□□ 0.53
CIRBP-212ENST00000587169 GCNT3O95395 438 aa18.37■□□□□ 0.53
CIRBP-212ENST00000587169 SPATA31C1P0DKV0 1188 aa18.37■□□□□ 0.53
CIRBP-212ENST00000587169 HSPA1LP34931 641 aa18.37■□□□□ 0.53
CIRBP-212ENST00000587169 GALCP54803 685 aa18.37■□□□□ 0.53
CIRBP-212ENST00000587169 ZNF211Q13398 564 aaPredicted RBP18.37■□□□□ 0.53
CIRBP-212ENST00000587169 USH1GQ495M9 461 aa18.37■□□□□ 0.53
CIRBP-212ENST00000587169 RUSC1Q9BVN2 902 aa18.37■□□□□ 0.53
CIRBP-212ENST00000587169 BHMT2Q9H2M3 363 aa18.37■□□□□ 0.53
CIRBP-212ENST00000587169 RGL1Q9NZL6 768 aa18.37■□□□□ 0.53
CIRBP-212ENST00000587169 SLC12A6Q9UHW9 1150 aa18.37■□□□□ 0.53
CIRBP-212ENST00000587169 SBF2Q86WG5 1849 aa18.37■□□□□ 0.53
CIRBP-212ENST00000587169 FLOT1O75955 427 aa18.36■□□□□ 0.53
CIRBP-212ENST00000587169 FGGP02679 453 aa18.36■□□□□ 0.53
CIRBP-212ENST00000587169 NR3C1P04150 777 aa18.36■□□□□ 0.53
CIRBP-212ENST00000587169 SERPINB2P05120 415 aa18.36■□□□□ 0.53
CIRBP-212ENST00000587169 GCFC2P16383 781 aaKnown RBP18.36■□□□□ 0.53
CIRBP-212ENST00000587169 RC3H1Q5TC82 1133 aaKnown RBP18.36■□□□□ 0.53
CIRBP-212ENST00000587169 EMC10Q5UCC4 262 aa18.36■□□□□ 0.53
CIRBP-212ENST00000587169 ZC3H3Q8IXZ2 948 aaKnown RBP18.36■□□□□ 0.53
CIRBP-212ENST00000587169 TBC1D16Q8TBP0 767 aa18.36■□□□□ 0.53
CIRBP-212ENST00000587169 SLC35C1Q96A29 364 aa18.36■□□□□ 0.53
CIRBP-212ENST00000587169 USP40Q9NVE5 1235 aa18.36■□□□□ 0.53
CIRBP-212ENST00000587169 DDX20Q9UHI6 824 aaKnown RBP18.36■□□□□ 0.53
CIRBP-212ENST00000587169 PPP1R9AQ9ULJ8 1098 aa18.36■□□□□ 0.53
CIRBP-212ENST00000587169 ATP8A1Q9Y2Q0 1164 aa18.36■□□□□ 0.53
CIRBP-212ENST00000587169 IGSF9BQ9UPX0 1349 aa18.36■□□□□ 0.53
CIRBP-212ENST00000587169 FRMD3A2A2Y4 597 aa18.36■□□□□ 0.53
CIRBP-212ENST00000587169 ZBTB39O15060 712 aa18.36■□□□□ 0.53
CIRBP-212ENST00000587169 NFIAQ12857 509 aa18.36■□□□□ 0.53
CIRBP-212ENST00000587169 CUL1Q13616 776 aa18.36■□□□□ 0.53
CIRBP-212ENST00000587169 NT5DC3Q86UY8 548 aa18.36■□□□□ 0.53
CIRBP-212ENST00000587169 LNX1Q8TBB1 728 aaPredicted RBP18.36■□□□□ 0.53
CIRBP-212ENST00000587169 FAM163AQ96GL9 167 aaPredicted RBP18.36■□□□□ 0.53
CIRBP-212ENST00000587169 WNK3Q9BYP7 1800 aa18.36■□□□□ 0.53
CIRBP-212ENST00000587169 PHF20L1A8MW92 1017 aa18.36■□□□□ 0.53
CIRBP-212ENST00000587169 TULP1O00294 542 aaPredicted RBP18.36■□□□□ 0.53
CIRBP-212ENST00000587169 BUB1BO60566 1050 aaPredicted RBP18.36■□□□□ 0.53
CIRBP-212ENST00000587169 FSBPO95073 299 aa18.36■□□□□ 0.53
CIRBP-212ENST00000587169 SPIRE1Q08AE8 756 aa18.36■□□□□ 0.53
CIRBP-212ENST00000587169 VPS72Q15906 364 aa18.36■□□□□ 0.53
CIRBP-212ENST00000587169 KRT71Q3SY84 523 aa18.36■□□□□ 0.53
CIRBP-212ENST00000587169 AADACL2Q6P093 401 aa18.36■□□□□ 0.53
CIRBP-212ENST00000587169 FRMD5Q7Z6J6 570 aa18.36■□□□□ 0.53
CIRBP-212ENST00000587169 CCDC13Q8IYE1 715 aa18.36■□□□□ 0.53
CIRBP-212ENST00000587169 CERS5Q8N5B7 392 aa18.36■□□□□ 0.53
CIRBP-212ENST00000587169 PIGOQ8TEQ8 1089 aa18.36■□□□□ 0.53
CIRBP-212ENST00000587169 LRRC45Q96CN5 670 aa18.36■□□□□ 0.53
CIRBP-212ENST00000587169 DNM3Q9UQ16 869 aa18.36■□□□□ 0.53
CIRBP-212ENST00000587169 ASTN1O14525 1302 aa18.35■□□□□ 0.53
CIRBP-212ENST00000587169 CDK5RAP2Q96SN8 1893 aa18.35■□□□□ 0.53
CIRBP-212ENST00000587169 GMNCA6NCL1 334 aa18.35■□□□□ 0.53
CIRBP-212ENST00000587169 FAM86B1E9PN63 330 aa18.35■□□□□ 0.53
CIRBP-212ENST00000587169 FAM86B2P0C5J1 330 aa18.35■□□□□ 0.53
CIRBP-212ENST00000587169 ARHGAP4P98171 946 aa18.35■□□□□ 0.53
CIRBP-212ENST00000587169 COG2Q14746 738 aa18.35■□□□□ 0.53
CIRBP-212ENST00000587169 ZC2HC1CQ53FD0 456 aaPredicted RBP18.35■□□□□ 0.53
CIRBP-212ENST00000587169 GLG1Q92896 1179 aa18.35■□□□□ 0.53
CIRBP-212ENST00000587169 CHORDC1Q9UHD1 332 aaPredicted RBP18.35■□□□□ 0.53
CIRBP-212ENST00000587169 TRAF3IP3Q9Y228 551 aa18.35■□□□□ 0.53
CIRBP-212ENST00000587169 MEIS2O14770 477 aa18.35■□□□□ 0.53
CIRBP-212ENST00000587169 IRX3P78415 501 aaPredicted RBP18.35■□□□□ 0.53
CIRBP-212ENST00000587169 MICALCLQ6ZW33 695 aa18.35■□□□□ 0.53
CIRBP-212ENST00000587169 JPH2Q9BR39 696 aaPredicted RBP18.35■□□□□ 0.53
CIRBP-212ENST00000587169 SEPT11Q9NVA2 429 aaKnown RBP18.35■□□□□ 0.53
CIRBP-212ENST00000587169 STXBP5LQ9Y2K9 1186 aa18.35■□□□□ 0.53
CIRBP-212ENST00000587169 SMIM23A6NLE4 172 aa18.34■□□□□ 0.53
CIRBP-212ENST00000587169 BTNL10A8MVZ5 291 aa18.34■□□□□ 0.53
CIRBP-212ENST00000587169 EVI5O60447 810 aa18.34■□□□□ 0.53
CIRBP-212ENST00000587169 ATP2B4P23634 1241 aa18.34■□□□□ 0.53
CIRBP-212ENST00000587169 NMT1P30419 496 aaKnown RBP18.34■□□□□ 0.53
CIRBP-212ENST00000587169 HOXA13P31271 388 aaPredicted RBP18.34■□□□□ 0.53
CIRBP-212ENST00000587169 DDR1Q08345 913 aa18.34■□□□□ 0.53
CIRBP-212ENST00000587169 PDE4CQ08493 712 aa18.34■□□□□ 0.53
CIRBP-212ENST00000587169 UBAP2Q5T6F2 1119 aaKnown RBP18.34■□□□□ 0.53
CIRBP-212ENST00000587169 PPP1R18Q6NYC8 613 aa18.34■□□□□ 0.53
CIRBP-212ENST00000587169 TMC3Q7Z5M5 1100 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms