RNA–Protein interactions for RNA: ENST00000586486.1

PRKCSH-203, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 1 (best)

Gene PRKCSH, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-203ENST00000586486 ACTN4O43707 911 aaKnown RBP18.92■□□□□ 0.62
PRKCSH-203ENST00000586486 BHMT2Q9H2M3 363 aa18.92■□□□□ 0.62
PRKCSH-203ENST00000586486 TMEM150BA6NC51 233 aa18.92■□□□□ 0.62
PRKCSH-203ENST00000586486 ZBTB42B2RXF5 422 aa18.92■□□□□ 0.62
PRKCSH-203ENST00000586486 NR1I2O75469 434 aa18.92■□□□□ 0.62
PRKCSH-203ENST00000586486 ZNF202O95125 648 aa18.92■□□□□ 0.62
PRKCSH-203ENST00000586486 MBD3O95983 291 aa18.92■□□□□ 0.62
PRKCSH-203ENST00000586486 SLFN14P0C7P3 912 aa18.92■□□□□ 0.62
PRKCSH-203ENST00000586486 HOXC8P31273 242 aa18.92■□□□□ 0.62
PRKCSH-203ENST00000586486 ZNF484Q5JVG2 852 aa18.92■□□□□ 0.62
PRKCSH-203ENST00000586486 PLA2G4FQ68DD2 849 aa18.92■□□□□ 0.62
PRKCSH-203ENST00000586486 SESTD1Q86VW0 696 aa18.92■□□□□ 0.62
PRKCSH-203ENST00000586486 SYT2Q8N9I0 419 aaPredicted RBP18.92■□□□□ 0.62
PRKCSH-203ENST00000586486 CEP89Q96ST8 783 aa18.92■□□□□ 0.62
PRKCSH-203ENST00000586486 CYP26B1Q9NR63 512 aa18.92■□□□□ 0.62
PRKCSH-203ENST00000586486 NRCAMQ92823 1304 aa18.91■□□□□ 0.62
PRKCSH-203ENST00000586486 KAT6AQ92794 2004 aa18.91■□□□□ 0.62
PRKCSH-203ENST00000586486 PLA2G4BP0C869 781 aa18.91■□□□□ 0.62
PRKCSH-203ENST00000586486 SMIM10L2AP0DMW4 78 aa18.91■□□□□ 0.62
PRKCSH-203ENST00000586486 SMIM10L2BP0DMW5 78 aa18.91■□□□□ 0.62
PRKCSH-203ENST00000586486 INSRRP14616 1297 aa18.91■□□□□ 0.62
PRKCSH-203ENST00000586486 SLC12A3P55017 1021 aa18.91■□□□□ 0.62
PRKCSH-203ENST00000586486 PPFIA1Q13136 1202 aa18.91■□□□□ 0.62
PRKCSH-203ENST00000586486 NBPF20Q3BBV1 942 aa18.91■□□□□ 0.62
PRKCSH-203ENST00000586486 LONRF3Q496Y0 759 aa18.91■□□□□ 0.62
PRKCSH-203ENST00000586486 NFRKBQ6P4R8 1299 aa18.91■□□□□ 0.62
PRKCSH-203ENST00000586486 CEP170P1Q96L14 293 aa18.91■□□□□ 0.62
PRKCSH-203ENST00000586486 CCDC43Q96MW1 224 aaKnown RBP18.91■□□□□ 0.62
PRKCSH-203ENST00000586486 TIGD1Q96MW7 591 aa18.91■□□□□ 0.62
PRKCSH-203ENST00000586486 SEZ6LQ9BYH1 1024 aa18.91■□□□□ 0.62
PRKCSH-203ENST00000586486 TNMDQ9H2S6 317 aa18.91■□□□□ 0.62
PRKCSH-203ENST00000586486 STARD7Q9NQZ5 370 aa18.91■□□□□ 0.62
PRKCSH-203ENST00000586486 KBTBD4Q9NVX7 518 aa18.91■□□□□ 0.62
PRKCSH-203ENST00000586486 A0A087WWV3 80 aa18.9■□□□□ 0.62
PRKCSH-203ENST00000586486 ARHGEF35A5YM69 484 aa18.9■□□□□ 0.62
PRKCSH-203ENST00000586486 RRN3P2A6NIE6 340 aa18.9■□□□□ 0.62
PRKCSH-203ENST00000586486 COL6A1P12109 1028 aa18.9■□□□□ 0.62
PRKCSH-203ENST00000586486 NPEPPSP55786 919 aa18.9■□□□□ 0.62
PRKCSH-203ENST00000586486 PTPN11Q06124 597 aaPredicted RBP18.9■□□□□ 0.62
PRKCSH-203ENST00000586486 ITGA7Q13683 1181 aa18.9■□□□□ 0.62
PRKCSH-203ENST00000586486 XKR9Q5GH70 373 aa18.9■□□□□ 0.62
PRKCSH-203ENST00000586486 KRBA2Q6ZNG9 492 aa18.9■□□□□ 0.62
PRKCSH-203ENST00000586486 TRMT1LQ7Z2T5 733 aaKnown RBP18.9■□□□□ 0.62
PRKCSH-203ENST00000586486 CEP57L1Q8IYX8 460 aa18.9■□□□□ 0.62
PRKCSH-203ENST00000586486 C7orf31Q8N865 590 aa18.9■□□□□ 0.62
PRKCSH-203ENST00000586486 SLC43A3Q8NBI5 491 aa18.9■□□□□ 0.62
PRKCSH-203ENST00000586486 KCND2Q9NZV8 630 aa18.9■□□□□ 0.62
PRKCSH-203ENST00000586486 SERTAD1Q9UHV2 236 aa18.9■□□□□ 0.62
PRKCSH-203ENST00000586486 GRIN2DO15399 1336 aa18.9■□□□□ 0.62
PRKCSH-203ENST00000586486 A0A0U1RQG5 324 aaPredicted RBP18.89■□□□□ 0.62
PRKCSH-203ENST00000586486 RFC5P40937 340 aa18.89■□□□□ 0.62
PRKCSH-203ENST00000586486 MCM6Q14566 821 aa18.89■□□□□ 0.62
PRKCSH-203ENST00000586486 GRIK4Q16099 956 aa18.89■□□□□ 0.62
PRKCSH-203ENST00000586486 MTERF2Q49AM1 385 aa18.89■□□□□ 0.62
PRKCSH-203ENST00000586486 GPT2Q8TD30 523 aa18.89■□□□□ 0.62
PRKCSH-203ENST00000586486 LMBR1Q8WVP7 490 aa18.89■□□□□ 0.62
PRKCSH-203ENST00000586486 DACT1Q9NYF0 836 aa18.89■□□□□ 0.62
PRKCSH-203ENST00000586486 KINO60870 393 aaKnown RBP18.89■□□□□ 0.61
PRKCSH-203ENST00000586486 DGAT1O75907 488 aa18.89■□□□□ 0.61
PRKCSH-203ENST00000586486 ADAM17P78536 824 aa18.89■□□□□ 0.61
PRKCSH-203ENST00000586486 SV2BQ7L1I2 683 aa18.89■□□□□ 0.61
PRKCSH-203ENST00000586486 EXOC8Q8IYI6 725 aa18.89■□□□□ 0.61
PRKCSH-203ENST00000586486 CNNM3Q8NE01 707 aa18.89■□□□□ 0.61
PRKCSH-203ENST00000586486 DHX33Q9H6R0 707 aaKnown RBP18.89■□□□□ 0.61
PRKCSH-203ENST00000586486 HDAC6Q9UBN7 1215 aa18.89■□□□□ 0.61
PRKCSH-203ENST00000586486 GTF2IRD1Q9UHL9 959 aa18.89■□□□□ 0.61
PRKCSH-203ENST00000586486 MBLAC1A4D2B0 266 aaPredicted RBP18.88■□□□□ 0.61
PRKCSH-203ENST00000586486 C22orf31O95567 290 aa18.88■□□□□ 0.61
PRKCSH-203ENST00000586486 GNAT1P11488 350 aa18.88■□□□□ 0.61
PRKCSH-203ENST00000586486 CHMP4BP1P59074 171 aa18.88■□□□□ 0.61
PRKCSH-203ENST00000586486 NFKBIBQ15653 356 aa18.88■□□□□ 0.61
PRKCSH-203ENST00000586486 MARCH8Q5T0T0 291 aa18.88■□□□□ 0.61
PRKCSH-203ENST00000586486 RINT1Q6NUQ1 792 aa18.88■□□□□ 0.61
PRKCSH-203ENST00000586486 KANK3Q6NY19 840 aa18.88■□□□□ 0.61
PRKCSH-203ENST00000586486 PADI6Q6TGC4 694 aa18.88■□□□□ 0.61
PRKCSH-203ENST00000586486 SH3RF1Q7Z6J0 888 aa18.88■□□□□ 0.61
PRKCSH-203ENST00000586486 ELOA2Q8IYF1 753 aaPredicted RBP18.88■□□□□ 0.61
PRKCSH-203ENST00000586486 VTI1AQ96AJ9 217 aa18.88■□□□□ 0.61
PRKCSH-203ENST00000586486 CCDC34Q96HJ3 373 aa18.88■□□□□ 0.61
PRKCSH-203ENST00000586486 ABHD8Q96I13 439 aa18.88■□□□□ 0.61
PRKCSH-203ENST00000586486 MTRQ99707 1265 aa18.88■□□□□ 0.61
PRKCSH-203ENST00000586486 SH2D3AQ9BRG2 576 aa18.88■□□□□ 0.61
PRKCSH-203ENST00000586486 LRRC27Q9C0I9 530 aa18.88■□□□□ 0.61
PRKCSH-203ENST00000586486 SETD4Q9NVD3 440 aa18.88■□□□□ 0.61
PRKCSH-203ENST00000586486 C17orf102A2RUQ5 167 aa18.87■□□□□ 0.61
PRKCSH-203ENST00000586486 MAGEB2O15479 319 aa18.87■□□□□ 0.61
PRKCSH-203ENST00000586486 GAS2O43903 313 aaKnown RBP18.87■□□□□ 0.61
PRKCSH-203ENST00000586486 MAFO75444 373 aaPredicted RBP18.87■□□□□ 0.61
PRKCSH-203ENST00000586486 SSBP05455 408 aaKnown RBP eCLIP18.87■□□□□ 0.61
PRKCSH-203ENST00000586486 CYP11B2P19099 503 aa18.87■□□□□ 0.61
PRKCSH-203ENST00000586486 POLGP54098 1239 aaPredicted RBP18.87■□□□□ 0.61
PRKCSH-203ENST00000586486 AMPD3Q01432 767 aa18.87■□□□□ 0.61
PRKCSH-203ENST00000586486 TBC1D8BQ0IIM8 1120 aa18.87■□□□□ 0.61
PRKCSH-203ENST00000586486 CNNM4Q6P4Q7 775 aa18.87■□□□□ 0.61
PRKCSH-203ENST00000586486 C1orf186Q6ZWK4 172 aa18.87■□□□□ 0.61
PRKCSH-203ENST00000586486 GPBP1Q86WP2 473 aa18.87■□□□□ 0.61
PRKCSH-203ENST00000586486 DIS3LQ8TF46 1054 aaKnown RBP18.87■□□□□ 0.61
PRKCSH-203ENST00000586486 TRAPPC12Q8WVT3 735 aa18.87■□□□□ 0.61
PRKCSH-203ENST00000586486 SLC7A3Q8WY07 619 aa18.87■□□□□ 0.61
PRKCSH-203ENST00000586486 JPH2Q9BR39 696 aaPredicted RBP18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms