RNA–Protein interactions for RNA: ENST00000585847.5

VMP1-202, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-202ENST00000585847 MIER3Q7Z3K6 550 aa14.1□□□□□ -0.15
VMP1-202ENST00000585847 SH3RF1Q7Z6J0 888 aa14.1□□□□□ -0.15
VMP1-202ENST00000585847 SLC43A3Q8NBI5 491 aa14.1□□□□□ -0.15
VMP1-202ENST00000585847 FAM200AQ8TCP9 573 aa14.1□□□□□ -0.15
VMP1-202ENST00000585847 SNX29Q8TEQ0 813 aa14.1□□□□□ -0.15
VMP1-202ENST00000585847 LRCH3Q96II8 777 aa14.1□□□□□ -0.15
VMP1-202ENST00000585847 HSD17B14Q9BPX1 270 aa14.1□□□□□ -0.15
VMP1-202ENST00000585847 EIF2AK1Q9BQI3 630 aaKnown RBP14.1□□□□□ -0.15
VMP1-202ENST00000585847 MTG1Q9BT17 334 aaPredicted RBP14.1□□□□□ -0.15
VMP1-202ENST00000585847 POLR3CQ9BUI4 534 aaPredicted RBP14.1□□□□□ -0.15
VMP1-202ENST00000585847 RNPEPQ9H4A4 650 aa14.1□□□□□ -0.15
VMP1-202ENST00000585847 RGL1Q9NZL6 768 aa14.1□□□□□ -0.15
VMP1-202ENST00000585847 MAFBQ9Y5Q3 323 aaPredicted RBP14.1□□□□□ -0.15
VMP1-202ENST00000585847 KAT6AQ92794 2004 aa14.1□□□□□ -0.15
VMP1-202ENST00000585847 KBTBD13C9JR72 458 aa14.09□□□□□ -0.15
VMP1-202ENST00000585847 SOX1O00570 391 aaPredicted RBP14.09□□□□□ -0.15
VMP1-202ENST00000585847 GTPBP6O43824 516 aaPredicted RBP14.09□□□□□ -0.15
VMP1-202ENST00000585847 ZEB2O60315 1214 aa14.09□□□□□ -0.15
VMP1-202ENST00000585847 KPNA6O60684 536 aa14.09□□□□□ -0.15
VMP1-202ENST00000585847 MED24O75448 989 aa14.09□□□□□ -0.15
VMP1-202ENST00000585847 SLITRK3O94933 977 aa14.09□□□□□ -0.15
VMP1-202ENST00000585847 PSAPP07602 524 aa14.09□□□□□ -0.15
VMP1-202ENST00000585847 PSEN2P49810 448 aa14.09□□□□□ -0.15
VMP1-202ENST00000585847 LONRF3Q496Y0 759 aa14.09□□□□□ -0.15
VMP1-202ENST00000585847 MIS18BP1Q6P0N0 1132 aa14.09□□□□□ -0.15
VMP1-202ENST00000585847 USP49Q70CQ1 688 aa14.09□□□□□ -0.15
VMP1-202ENST00000585847 PLPPR4Q7Z2D5 763 aa14.09□□□□□ -0.15
VMP1-202ENST00000585847 LRRC15Q8TF66 581 aa14.09□□□□□ -0.15
VMP1-202ENST00000585847 SMARCE1Q969G3 411 aa14.09□□□□□ -0.15
VMP1-202ENST00000585847 DYDC2Q96IM9 177 aa14.09□□□□□ -0.15
VMP1-202ENST00000585847 EPSTI1Q96J88 318 aa14.09□□□□□ -0.15
VMP1-202ENST00000585847 TUFT1Q9NNX1 390 aa14.09□□□□□ -0.15
VMP1-202ENST00000585847 ZNF302Q9NR11 478 aa14.09□□□□□ -0.15
VMP1-202ENST00000585847 BMP2KQ9NSY1 1161 aaPredicted RBP14.09□□□□□ -0.15
VMP1-202ENST00000585847 KBTBD4Q9NVX7 518 aa14.09□□□□□ -0.15
VMP1-202ENST00000585847 GABBR1Q9UBS5 961 aa14.09□□□□□ -0.15
VMP1-202ENST00000585847 H3BRB1 525 aa14.08□□□□□ -0.16
VMP1-202ENST00000585847 RPA1P27694 616 aa14.08□□□□□ -0.16
VMP1-202ENST00000585847 HOXC8P31273 242 aa14.08□□□□□ -0.16
VMP1-202ENST00000585847 CDK7P50613 346 aa14.08□□□□□ -0.16
VMP1-202ENST00000585847 STAT5BP51692 787 aa14.08□□□□□ -0.16
VMP1-202ENST00000585847 MFSD10Q14728 455 aa14.08□□□□□ -0.16
VMP1-202ENST00000585847 SNX17Q15036 470 aa14.08□□□□□ -0.16
VMP1-202ENST00000585847 PLCB4Q15147 1175 aa14.08□□□□□ -0.16
VMP1-202ENST00000585847 CAMK4Q16566 473 aa14.08□□□□□ -0.16
VMP1-202ENST00000585847 TMEM119Q4V9L6 283 aa14.08□□□□□ -0.16
VMP1-202ENST00000585847 PDXDC2PQ6P474 469 aa14.08□□□□□ -0.16
VMP1-202ENST00000585847 MLKLQ8NB16 471 aa14.08□□□□□ -0.16
VMP1-202ENST00000585847 BANK1Q8NDB2 785 aa14.08□□□□□ -0.16
VMP1-202ENST00000585847 DHX58Q96C10 678 aa14.08□□□□□ -0.16
VMP1-202ENST00000585847 SENP6Q9GZR1 1112 aaPredicted RBP14.08□□□□□ -0.16
VMP1-202ENST00000585847 SMARCAD1Q9H4L7 1026 aa14.08□□□□□ -0.16
VMP1-202ENST00000585847 TUT1Q9H6E5 874 aaKnown RBP14.08□□□□□ -0.16
VMP1-202ENST00000585847 GRPEL1Q9HAV7 217 aa14.08□□□□□ -0.16
VMP1-202ENST00000585847 KCND2Q9NZV8 630 aa14.08□□□□□ -0.16
VMP1-202ENST00000585847 ZMYND8Q9ULU4 1186 aaPredicted RBP14.08□□□□□ -0.16
VMP1-202ENST00000585847 ARID2Q68CP9 1835 aa14.08□□□□□ -0.16
VMP1-202ENST00000585847 CABYRO75952 493 aa14.07□□□□□ -0.16
VMP1-202ENST00000585847 MARK3P27448 753 aa14.07□□□□□ -0.16
VMP1-202ENST00000585847 TPM4P67936 248 aa14.07□□□□□ -0.16
VMP1-202ENST00000585847 ADAM17P78536 824 aa14.07□□□□□ -0.16
VMP1-202ENST00000585847 MDM2Q00987 491 aaPredicted RBP14.07□□□□□ -0.16
VMP1-202ENST00000585847 CYP4A11Q02928 519 aa14.07□□□□□ -0.16
VMP1-202ENST00000585847 CTTNQ14247 550 aaKnown RBP14.07□□□□□ -0.16
VMP1-202ENST00000585847 KCNB1Q14721 858 aa14.07□□□□□ -0.16
VMP1-202ENST00000585847 KIAA0753Q2KHM9 967 aa14.07□□□□□ -0.16
VMP1-202ENST00000585847 NBPF20Q3BBV1 942 aa14.07□□□□□ -0.16
VMP1-202ENST00000585847 BRDTQ58F21 947 aaPredicted RBP14.07□□□□□ -0.16
VMP1-202ENST00000585847 SPECC1Q5M775 1068 aa14.07□□□□□ -0.16
VMP1-202ENST00000585847 SLC39A5Q6ZMH5 540 aa14.07□□□□□ -0.16
VMP1-202ENST00000585847 CATSPER3Q86XQ3 398 aa14.07□□□□□ -0.16
VMP1-202ENST00000585847 PDILTQ8N807 584 aa14.07□□□□□ -0.16
VMP1-202ENST00000585847 PNMA5Q96PV4 448 aa14.07□□□□□ -0.16
VMP1-202ENST00000585847 CTAGE1Q96RT6 745 aa14.07□□□□□ -0.16
VMP1-202ENST00000585847 CEP89Q96ST8 783 aa14.07□□□□□ -0.16
VMP1-202ENST00000585847 C11orf49Q9H6J7 331 aa14.07□□□□□ -0.16
VMP1-202ENST00000585847 STARD7Q9NQZ5 370 aa14.07□□□□□ -0.16
VMP1-202ENST00000585847 SERTAD1Q9UHV2 236 aa14.07□□□□□ -0.16
VMP1-202ENST00000585847 SAMM50Q9Y512 469 aa14.07□□□□□ -0.16
VMP1-202ENST00000585847 EVPLQ92817 2033 aa14.07□□□□□ -0.16
VMP1-202ENST00000585847 A0A087WWV3 80 aa14.06□□□□□ -0.16
VMP1-202ENST00000585847 POTEB3A0JP26 581 aa14.06□□□□□ -0.16
VMP1-202ENST00000585847 TMEM150BA6NC51 233 aa14.06□□□□□ -0.16
VMP1-202ENST00000585847 ZBTB42B2RXF5 422 aa14.06□□□□□ -0.16
VMP1-202ENST00000585847 BACH1O14867 736 aa14.06□□□□□ -0.16
VMP1-202ENST00000585847 ZBTB39O15060 712 aa14.06□□□□□ -0.16
VMP1-202ENST00000585847 LYPLA2O95372 231 aa14.06□□□□□ -0.16
VMP1-202ENST00000585847 P4HBP07237 508 aaKnown RBP14.06□□□□□ -0.16
VMP1-202ENST00000585847 SYN1P17600 705 aa14.06□□□□□ -0.16
VMP1-202ENST00000585847 PLCG1P19174 1290 aa14.06□□□□□ -0.16
VMP1-202ENST00000585847 BMP8BP34820 402 aa14.06□□□□□ -0.16
VMP1-202ENST00000585847 QARSP47897 775 aaKnown RBP14.06□□□□□ -0.16
VMP1-202ENST00000585847 SARSP49591 514 aaKnown RBP14.06□□□□□ -0.16
VMP1-202ENST00000585847 NLRP12P59046 1061 aa14.06□□□□□ -0.16
VMP1-202ENST00000585847 PSMC5P62195 406 aa14.06□□□□□ -0.16
VMP1-202ENST00000585847 GRB10Q13322 594 aa14.06□□□□□ -0.16
VMP1-202ENST00000585847 ITGA7Q13683 1181 aa14.06□□□□□ -0.16
VMP1-202ENST00000585847 POTEBQ6S5H4 581 aa14.06□□□□□ -0.16
VMP1-202ENST00000585847 SV2BQ7L1I2 683 aa14.06□□□□□ -0.16
VMP1-202ENST00000585847 SESTD1Q86VW0 696 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms