RNA–Protein interactions for RNA: ENST00000584541.1

RFFL-211, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-211ENST00000584541 NIFKQ9BYG3 293 aaKnown RBP20.42■□□□□ 0.86
RFFL-211ENST00000584541 LRRC27Q9C0I9 530 aa20.42■□□□□ 0.86
RFFL-211ENST00000584541 BHMT2Q9H2M3 363 aa20.42■□□□□ 0.86
RFFL-211ENST00000584541 RNPEPQ9H4A4 650 aa20.42■□□□□ 0.86
RFFL-211ENST00000584541 SERTAD1Q9UHV2 236 aa20.42■□□□□ 0.86
RFFL-211ENST00000584541 PPME1Q9Y570 386 aa20.42■□□□□ 0.86
RFFL-211ENST00000584541 A0A087WWV3 80 aa20.41■□□□□ 0.86
RFFL-211ENST00000584541 HAS3O00219 553 aa20.41■□□□□ 0.86
RFFL-211ENST00000584541 STBD1O95210 358 aa20.41■□□□□ 0.86
RFFL-211ENST00000584541 PLA2G4BP0C869 781 aa20.41■□□□□ 0.86
RFFL-211ENST00000584541 AMPD3Q01432 767 aa20.41■□□□□ 0.86
RFFL-211ENST00000584541 SNW1Q13573 536 aaKnown RBP20.41■□□□□ 0.86
RFFL-211ENST00000584541 NAALADL2Q58DX5 795 aa20.41■□□□□ 0.86
RFFL-211ENST00000584541 ZNF484Q5JVG2 852 aa20.41■□□□□ 0.86
RFFL-211ENST00000584541 PLA2G4FQ68DD2 849 aa20.41■□□□□ 0.86
RFFL-211ENST00000584541 KRBA2Q6ZNG9 492 aa20.41■□□□□ 0.86
RFFL-211ENST00000584541 TIGD1Q96MW7 591 aa20.41■□□□□ 0.86
RFFL-211ENST00000584541 BLOC1S4Q9NUP1 217 aa20.41■□□□□ 0.86
RFFL-211ENST00000584541 DACT1Q9NYF0 836 aa20.41■□□□□ 0.86
RFFL-211ENST00000584541 HOOK1Q9UJC3 728 aaKnown RBP20.41■□□□□ 0.86
RFFL-211ENST00000584541 PHF24Q9UPV7 400 aa20.41■□□□□ 0.86
RFFL-211ENST00000584541 COL1A2P08123 1366 aa20.41■□□□□ 0.86
RFFL-211ENST00000584541 ZBTB39O15060 712 aa20.4■□□□□ 0.86
RFFL-211ENST00000584541 RARRES1P49788 294 aa20.4■□□□□ 0.86
RFFL-211ENST00000584541 DHX8Q14562 1220 aaKnown RBP20.4■□□□□ 0.86
RFFL-211ENST00000584541 MCM6Q14566 821 aa20.4■□□□□ 0.86
RFFL-211ENST00000584541 SKOR2Q2VWA4 1001 aaPredicted RBP20.4■□□□□ 0.86
RFFL-211ENST00000584541 LONRF3Q496Y0 759 aa20.4■□□□□ 0.86
RFFL-211ENST00000584541 MTERF2Q49AM1 385 aa20.4■□□□□ 0.86
RFFL-211ENST00000584541 C7orf31Q8N865 590 aa20.4■□□□□ 0.86
RFFL-211ENST00000584541 SYT2Q8N9I0 419 aaPredicted RBP20.4■□□□□ 0.86
RFFL-211ENST00000584541 ANKLE1Q8NAG6 615 aa20.4■□□□□ 0.86
RFFL-211ENST00000584541 GPT2Q8TD30 523 aa20.4■□□□□ 0.86
RFFL-211ENST00000584541 TNMDQ9H2S6 317 aa20.4■□□□□ 0.86
RFFL-211ENST00000584541 CYP26B1Q9NR63 512 aa20.4■□□□□ 0.86
RFFL-211ENST00000584541 TMEM150BA6NC51 233 aa20.39■□□□□ 0.85
RFFL-211ENST00000584541 RRN3P2A6NIE6 340 aa20.39■□□□□ 0.85
RFFL-211ENST00000584541 ACTN4O43707 911 aaKnown RBP20.39■□□□□ 0.85
RFFL-211ENST00000584541 PPFIA1Q13136 1202 aa20.39■□□□□ 0.85
RFFL-211ENST00000584541 EXOC8Q8IYI6 725 aa20.39■□□□□ 0.85
RFFL-211ENST00000584541 STARD7Q9NQZ5 370 aa20.39■□□□□ 0.85
RFFL-211ENST00000584541 BMP2KQ9NSY1 1161 aaPredicted RBP20.39■□□□□ 0.85
RFFL-211ENST00000584541 NRCAMQ92823 1304 aa20.38■□□□□ 0.85
RFFL-211ENST00000584541 MYH11P35749 1972 aa20.38■□□□□ 0.85
RFFL-211ENST00000584541 A0A1W2PQ45 241 aaPredicted RBP20.38■□□□□ 0.85
RFFL-211ENST00000584541 A0A1W2PQY0 241 aa20.38■□□□□ 0.85
RFFL-211ENST00000584541 SMIM10L2AP0DMW4 78 aa20.38■□□□□ 0.85
RFFL-211ENST00000584541 SMIM10L2BP0DMW5 78 aa20.38■□□□□ 0.85
RFFL-211ENST00000584541 GNAT1P11488 350 aa20.38■□□□□ 0.85
RFFL-211ENST00000584541 INSRRP14616 1297 aa20.38■□□□□ 0.85
RFFL-211ENST00000584541 RFC5P40937 340 aa20.38■□□□□ 0.85
RFFL-211ENST00000584541 SLC12A3P55017 1021 aa20.38■□□□□ 0.85
RFFL-211ENST00000584541 NPEPPSP55786 919 aa20.38■□□□□ 0.85
RFFL-211ENST00000584541 NBPF20Q3BBV1 942 aa20.38■□□□□ 0.85
RFFL-211ENST00000584541 PADI6Q6TGC4 694 aa20.38■□□□□ 0.85
RFFL-211ENST00000584541 LRRC15Q8TF66 581 aa20.38■□□□□ 0.85
RFFL-211ENST00000584541 JPH2Q9BR39 696 aaPredicted RBP20.38■□□□□ 0.85
RFFL-211ENST00000584541 KBTBD4Q9NVX7 518 aa20.38■□□□□ 0.85
RFFL-211ENST00000584541 KCND2Q9NZV8 630 aa20.38■□□□□ 0.85
RFFL-211ENST00000584541 DGAT1O75907 488 aa20.37■□□□□ 0.85
RFFL-211ENST00000584541 KRT18P05783 430 aaKnown RBP20.37■□□□□ 0.85
RFFL-211ENST00000584541 AFMP43652 599 aa20.37■□□□□ 0.85
RFFL-211ENST00000584541 POLGP54098 1239 aaPredicted RBP20.37■□□□□ 0.85
RFFL-211ENST00000584541 IGBP1P78318 339 aa20.37■□□□□ 0.85
RFFL-211ENST00000584541 TBC1D8BQ0IIM8 1120 aa20.37■□□□□ 0.85
RFFL-211ENST00000584541 ITGA7Q13683 1181 aa20.37■□□□□ 0.85
RFFL-211ENST00000584541 TARBP2Q15633 366 aaKnown RBP20.37■□□□□ 0.85
RFFL-211ENST00000584541 GRIK4Q16099 956 aa20.37■□□□□ 0.85
RFFL-211ENST00000584541 FAM47CQ5HY64 1035 aa20.37■□□□□ 0.85
RFFL-211ENST00000584541 NFRKBQ6P4R8 1299 aa20.37■□□□□ 0.85
RFFL-211ENST00000584541 GPBP1Q86WP2 473 aa20.37■□□□□ 0.85
RFFL-211ENST00000584541 SLC7A3Q8WY07 619 aa20.37■□□□□ 0.85
RFFL-211ENST00000584541 SH2D3AQ9BRG2 576 aa20.37■□□□□ 0.85
RFFL-211ENST00000584541 SEZ6LQ9BYH1 1024 aa20.37■□□□□ 0.85
RFFL-211ENST00000584541 A0A0U1RQG5 324 aaPredicted RBP20.36■□□□□ 0.85
RFFL-211ENST00000584541 C17orf102A2RUQ5 167 aa20.36■□□□□ 0.85
RFFL-211ENST00000584541 MAGEB2O15479 319 aa20.36■□□□□ 0.85
RFFL-211ENST00000584541 USO1O60763 962 aaKnown RBP20.36■□□□□ 0.85
RFFL-211ENST00000584541 MYL1P05976 194 aa20.36■□□□□ 0.85
RFFL-211ENST00000584541 PTPN11Q06124 597 aaPredicted RBP20.36■□□□□ 0.85
RFFL-211ENST00000584541 RINT1Q6NUQ1 792 aa20.36■□□□□ 0.85
RFFL-211ENST00000584541 STAMQ92783 540 aa20.36■□□□□ 0.85
RFFL-211ENST00000584541 SYAP1Q96A49 352 aaPredicted RBP20.36■□□□□ 0.85
RFFL-211ENST00000584541 PAGE5Q96GU1 130 aa20.36■□□□□ 0.85
RFFL-211ENST00000584541 HDAC6Q9UBN7 1215 aa20.36■□□□□ 0.85
RFFL-211ENST00000584541 EVPLQ92817 2033 aa20.36■□□□□ 0.85
RFFL-211ENST00000584541 CENPFP49454 3210 aa20.35■□□□□ 0.85
RFFL-211ENST00000584541 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.35■□□□□ 0.85
RFFL-211ENST00000584541 KLHL40Q2TBA0 621 aa20.35■□□□□ 0.85
RFFL-211ENST00000584541 SESTD1Q86VW0 696 aa20.35■□□□□ 0.85
RFFL-211ENST00000584541 ELOA2Q8IYF1 753 aaPredicted RBP20.35■□□□□ 0.85
RFFL-211ENST00000584541 RETREG2Q8NC44 543 aa20.35■□□□□ 0.85
RFFL-211ENST00000584541 MCPH1Q8NEM0 835 aa20.35■□□□□ 0.85
RFFL-211ENST00000584541 TIPINQ9BVW5 301 aa20.35■□□□□ 0.85
RFFL-211ENST00000584541 NUP62CLQ9H1M0 184 aa20.35■□□□□ 0.85
RFFL-211ENST00000584541 ATP6V0A4Q9HBG4 840 aa20.35■□□□□ 0.85
RFFL-211ENST00000584541 SETD4Q9NVD3 440 aa20.35■□□□□ 0.85
RFFL-211ENST00000584541 TRIP12Q14669 1992 aaPredicted RBP20.35■□□□□ 0.85
RFFL-211ENST00000584541 ZBTB42B2RXF5 422 aa20.34■□□□□ 0.85
RFFL-211ENST00000584541 GTPBP6O43824 516 aaPredicted RBP20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms