RNA–Protein interactions for RNA: ENST00000583328.5

TOP3A-215, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 727 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-215ENST00000583328 MTHFD1LQ6UB35 978 aa14.07□□□□□ -0.16
TOP3A-215ENST00000583328 FAM43BQ6ZT52 329 aaPredicted RBP14.07□□□□□ -0.16
TOP3A-215ENST00000583328 SLC24A5Q71RS6 500 aa14.07□□□□□ -0.16
TOP3A-215ENST00000583328 ASCL5Q7RTU5 278 aa14.07□□□□□ -0.16
TOP3A-215ENST00000583328 PLPPR4Q7Z2D5 763 aa14.07□□□□□ -0.16
TOP3A-215ENST00000583328 MRPS27Q92552 414 aaKnown RBP14.07□□□□□ -0.16
TOP3A-215ENST00000583328 TCF25Q9BQ70 676 aa14.07□□□□□ -0.16
TOP3A-215ENST00000583328 LZTS2Q9BRK4 669 aa14.07□□□□□ -0.16
TOP3A-215ENST00000583328 ATP6V0A4Q9HBG4 840 aa14.07□□□□□ -0.16
TOP3A-215ENST00000583328 ENTPD7Q9NQZ7 604 aa14.07□□□□□ -0.16
TOP3A-215ENST00000583328 RGS18Q9NS28 235 aa14.07□□□□□ -0.16
TOP3A-215ENST00000583328 HCSTQ9UBK5 93 aa14.07□□□□□ -0.16
TOP3A-215ENST00000583328 PCDHA6Q9UN73 950 aa14.07□□□□□ -0.16
TOP3A-215ENST00000583328 LZTS1Q9Y250 596 aa14.07□□□□□ -0.16
TOP3A-215ENST00000583328 NOC2LQ9Y3T9 749 aaKnown RBP14.07□□□□□ -0.16
TOP3A-215ENST00000583328 PCDHA8Q9Y5H6 950 aa14.07□□□□□ -0.16
TOP3A-215ENST00000583328 E7EWF7 191 aa14.06□□□□□ -0.16
TOP3A-215ENST00000583328 GPR182O15218 404 aa14.06□□□□□ -0.16
TOP3A-215ENST00000583328 LAG3P18627 525 aa14.06□□□□□ -0.16
TOP3A-215ENST00000583328 KLRC1P26715 233 aa14.06□□□□□ -0.16
TOP3A-215ENST00000583328 GNAQP50148 359 aa14.06□□□□□ -0.16
TOP3A-215ENST00000583328 ACTR2P61160 394 aa14.06□□□□□ -0.16
TOP3A-215ENST00000583328 NUCB1Q02818 461 aa14.06□□□□□ -0.16
TOP3A-215ENST00000583328 KCNC3Q14003 757 aa14.06□□□□□ -0.16
TOP3A-215ENST00000583328 UBALD2Q8IYN6 164 aa14.06□□□□□ -0.16
TOP3A-215ENST00000583328 RASGRP4Q8TDF6 673 aa14.06□□□□□ -0.16
TOP3A-215ENST00000583328 IGDCC4Q8TDY8 1250 aa14.06□□□□□ -0.16
TOP3A-215ENST00000583328 MAP3K14Q99558 947 aa14.06□□□□□ -0.16
TOP3A-215ENST00000583328 SDF4Q9BRK5 362 aa14.06□□□□□ -0.16
TOP3A-215ENST00000583328 MYL10Q9BUA6 226 aa14.06□□□□□ -0.16
TOP3A-215ENST00000583328 CDHR5Q9HBB8 845 aa14.06□□□□□ -0.16
TOP3A-215ENST00000583328 NGRNQ9NPE2 291 aaKnown RBP14.06□□□□□ -0.16
TOP3A-215ENST00000583328 ST3GAL5Q9UNP4 418 aa14.06□□□□□ -0.16
TOP3A-215ENST00000583328 SORCS3Q9UPU3 1222 aa14.06□□□□□ -0.16
TOP3A-215ENST00000583328 LAMA4Q16363 1823 aa14.06□□□□□ -0.16
TOP3A-215ENST00000583328 DOCK5Q9H7D0 1870 aa14.06□□□□□ -0.16
TOP3A-215ENST00000583328 C9IYK1 514 aa14.05□□□□□ -0.16
TOP3A-215ENST00000583328 FGFR1P11362 822 aa14.05□□□□□ -0.16
TOP3A-215ENST00000583328 PLCB3Q01970 1234 aa14.05□□□□□ -0.16
TOP3A-215ENST00000583328 MTMR3Q13615 1198 aa14.05□□□□□ -0.16
TOP3A-215ENST00000583328 TPRNQ4KMQ1 711 aa14.05□□□□□ -0.16
TOP3A-215ENST00000583328 CES5AQ6NT32 575 aa14.05□□□□□ -0.16
TOP3A-215ENST00000583328 TMC7Q7Z402 723 aa14.05□□□□□ -0.16
TOP3A-215ENST00000583328 ZNF654Q8IZM8 581 aa14.05□□□□□ -0.16
TOP3A-215ENST00000583328 SRBD1Q8N5C6 995 aaKnown RBP14.05□□□□□ -0.16
TOP3A-215ENST00000583328 MXRA8Q9BRK3 442 aa14.05□□□□□ -0.16
TOP3A-215ENST00000583328 CWH43Q9H720 699 aa14.05□□□□□ -0.16
TOP3A-215ENST00000583328 KCNH7Q9NS40 1196 aa14.05□□□□□ -0.16
TOP3A-215ENST00000583328 PRR23AA6NEV1 266 aa14.04□□□□□ -0.16
TOP3A-215ENST00000583328 HIDE1A8MVS5 230 aa14.04□□□□□ -0.16
TOP3A-215ENST00000583328 C2CD4DB7Z1M9 353 aa14.04□□□□□ -0.16
TOP3A-215ENST00000583328 HBP1O60381 514 aa14.04□□□□□ -0.16
TOP3A-215ENST00000583328 DDAH1O94760 285 aa14.04□□□□□ -0.16
TOP3A-215ENST00000583328 PLEKHA8P1O95397 391 aa14.04□□□□□ -0.16
TOP3A-215ENST00000583328 BRD1O95696 1058 aa14.04□□□□□ -0.16
TOP3A-215ENST00000583328 PDE4AP27815 886 aa14.04□□□□□ -0.16
TOP3A-215ENST00000583328 NBL1P41271 181 aa14.04□□□□□ -0.16
TOP3A-215ENST00000583328 ANTXR2P58335 489 aa14.04□□□□□ -0.16
TOP3A-215ENST00000583328 PTH1RQ03431 593 aa14.04□□□□□ -0.16
TOP3A-215ENST00000583328 KRT17Q04695 432 aa14.04□□□□□ -0.16
TOP3A-215ENST00000583328 NFXL1Q6ZNB6 911 aa14.04□□□□□ -0.16
TOP3A-215ENST00000583328 KIAA0319LQ8IZA0 1049 aa14.04□□□□□ -0.16
TOP3A-215ENST00000583328 CMTR1Q8N1G2 835 aaKnown RBP14.04□□□□□ -0.16
TOP3A-215ENST00000583328 TMEM105Q8N8V8 129 aa14.04□□□□□ -0.16
TOP3A-215ENST00000583328 TMEM40Q8WWA1 233 aa14.04□□□□□ -0.16
TOP3A-215ENST00000583328 CASP10Q92851 521 aa14.04□□□□□ -0.16
TOP3A-215ENST00000583328 NECTIN4Q96NY8 510 aa14.04□□□□□ -0.16
TOP3A-215ENST00000583328 TMEM161AQ9NX61 479 aa14.04□□□□□ -0.16
TOP3A-215ENST00000583328 TAF6LQ9Y6J9 622 aa14.04□□□□□ -0.16
TOP3A-215ENST00000583328 hCG_1642624A0A1W2PR95 340 aa14.03□□□□□ -0.16
TOP3A-215ENST00000583328 BACH1O14867 736 aa14.03□□□□□ -0.16
TOP3A-215ENST00000583328 ARP10275 920 aa14.03□□□□□ -0.16
TOP3A-215ENST00000583328 SLC26A2P50443 739 aa14.03□□□□□ -0.16
TOP3A-215ENST00000583328 FAM189BP81408 668 aa14.03□□□□□ -0.16
TOP3A-215ENST00000583328 ASTLQ6HA08 431 aaPredicted RBP14.03□□□□□ -0.16
TOP3A-215ENST00000583328 CASC1Q6TDU7 716 aa14.03□□□□□ -0.16
TOP3A-215ENST00000583328 KCNT2Q6UVM3 1135 aa14.03□□□□□ -0.16
TOP3A-215ENST00000583328 CYP2W1Q8TAV3 490 aa14.03□□□□□ -0.16
TOP3A-215ENST00000583328 RUFY2Q8WXA3 655 aa14.03□□□□□ -0.16
TOP3A-215ENST00000583328 ZNF558Q96NG5 402 aa14.03□□□□□ -0.16
TOP3A-215ENST00000583328 PPP1R16BQ96T49 567 aa14.03□□□□□ -0.16
TOP3A-215ENST00000583328 TMEM117Q9H0C3 514 aa14.03□□□□□ -0.16
TOP3A-215ENST00000583328 ADAM7Q9H2U9 754 aa14.03□□□□□ -0.16
TOP3A-215ENST00000583328 MFSD1Q9H3U5 465 aa14.03□□□□□ -0.16
TOP3A-215ENST00000583328 POMKQ9H5K3 350 aa14.03□□□□□ -0.16
TOP3A-215ENST00000583328 ELAC1Q9H777 363 aaKnown RBP14.03□□□□□ -0.16
TOP3A-215ENST00000583328 LY9Q9HBG7 655 aa14.03□□□□□ -0.16
TOP3A-215ENST00000583328 CDH22Q9UJ99 828 aa14.03□□□□□ -0.16
TOP3A-215ENST00000583328 NFASCO94856 1347 aa14.03□□□□□ -0.16
TOP3A-215ENST00000583328 RIF1Q5UIP0 2472 aaKnown RBP14.03□□□□□ -0.16
TOP3A-215ENST00000583328 KMT2EQ8IZD2 1858 aa14.02□□□□□ -0.16
TOP3A-215ENST00000583328 CCDC69A6NI79 296 aa14.02□□□□□ -0.17
TOP3A-215ENST00000583328 HOXA2O43364 376 aa14.02□□□□□ -0.17
TOP3A-215ENST00000583328 ATG7O95352 703 aa14.02□□□□□ -0.17
TOP3A-215ENST00000583328 CA8P35219 290 aa14.02□□□□□ -0.17
TOP3A-215ENST00000583328 PPM1AP35813 382 aa14.02□□□□□ -0.17
TOP3A-215ENST00000583328 CRYBB1P53674 252 aaPredicted RBP14.02□□□□□ -0.17
TOP3A-215ENST00000583328 ITIH3Q06033 890 aa14.02□□□□□ -0.17
TOP3A-215ENST00000583328 KIZQ2M2Z5 673 aa14.02□□□□□ -0.17
TOP3A-215ENST00000583328 FAM160B1Q5W0V3 765 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms