RNA–Protein interactions for RNA: ENST00000583254.1

CTC1-211, Transcript of CST telomere replication complex component 1, humanhuman

TSL 2

Gene CTC1, Length 469 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-211ENST00000583254 RTEL1Q9NZ71 1219 aa8.14□□□□□ -1.11
CTC1-211ENST00000583254 PCDHA1Q9Y5I3 950 aa8.14□□□□□ -1.11
CTC1-211ENST00000583254 SQORQ9Y6N5 450 aa8.14□□□□□ -1.11
CTC1-211ENST00000583254 PATJQ8NI35 1801 aa8.13□□□□□ -1.11
CTC1-211ENST00000583254 NEDD4P46934 1319 aa8.13□□□□□ -1.11
CTC1-211ENST00000583254 DENND3A2RUS2 1198 aa8.13□□□□□ -1.11
CTC1-211ENST00000583254 SPATA31C2B4DYI2 1134 aa8.13□□□□□ -1.11
CTC1-211ENST00000583254 FIBPO43427 364 aa8.13□□□□□ -1.11
CTC1-211ENST00000583254 EPCAMP16422 314 aa8.13□□□□□ -1.11
CTC1-211ENST00000583254 TCF7P36402 384 aaPredicted RBP8.13□□□□□ -1.11
CTC1-211ENST00000583254 LMNB2Q03252 620 aa8.13□□□□□ -1.11
CTC1-211ENST00000583254 NFX1Q12986 1120 aaKnown RBP8.13□□□□□ -1.11
CTC1-211ENST00000583254 ASPRV1Q53RT3 343 aa8.13□□□□□ -1.11
CTC1-211ENST00000583254 KCNT2Q6UVM3 1135 aa8.13□□□□□ -1.11
CTC1-211ENST00000583254 TMC5Q6UXY8 1006 aa8.13□□□□□ -1.11
CTC1-211ENST00000583254 CCDC149Q6ZUS6 474 aa8.13□□□□□ -1.11
CTC1-211ENST00000583254 OTOP3Q7RTS5 596 aa8.13□□□□□ -1.11
CTC1-211ENST00000583254 TBC1D10CQ8IV04 446 aa8.13□□□□□ -1.11
CTC1-211ENST00000583254 C1orf210Q8IVY1 113 aa8.13□□□□□ -1.11
CTC1-211ENST00000583254 ADAM2Q99965 735 aa8.13□□□□□ -1.11
CTC1-211ENST00000583254 RTKNQ9BST9 563 aa8.13□□□□□ -1.11
CTC1-211ENST00000583254 AMNQ9BXJ7 453 aa8.13□□□□□ -1.11
CTC1-211ENST00000583254 ZBTB40Q9NUA8 1239 aa8.13□□□□□ -1.11
CTC1-211ENST00000583254 DZANK1Q9NVP4 752 aa8.13□□□□□ -1.11
CTC1-211ENST00000583254 DLGAP2Q9P1A6 1054 aa8.13□□□□□ -1.11
CTC1-211ENST00000583254 USP18Q9UMW8 372 aa8.13□□□□□ -1.11
CTC1-211ENST00000583254 PKD1L2Q7Z442 2459 aa8.13□□□□□ -1.11
CTC1-211ENST00000583254 FAM208BQ5VWN6 2430 aa8.13□□□□□ -1.11
CTC1-211ENST00000583254 MIA3Q5JRA6 1907 aa8.13□□□□□ -1.11
CTC1-211ENST00000583254 CACNA1IQ9P0X4 2223 aa8.13□□□□□ -1.11
CTC1-211ENST00000583254 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.12□□□□□ -1.11
CTC1-211ENST00000583254 PRR5-ARHGAP8B1AHC4 643 aa8.12□□□□□ -1.11
CTC1-211ENST00000583254 TRIM6-TRIM34B2RNG4 842 aa8.12□□□□□ -1.11
CTC1-211ENST00000583254 C9IYK1 514 aa8.12□□□□□ -1.11
CTC1-211ENST00000583254 GCOM1H8Y6P7 765 aaPredicted RBP8.12□□□□□ -1.11
CTC1-211ENST00000583254 CCER2I3L3R5 266 aa8.12□□□□□ -1.11
CTC1-211ENST00000583254 FGAP02671 866 aa8.12□□□□□ -1.11
CTC1-211ENST00000583254 POLR2MP0CAP2 368 aa8.12□□□□□ -1.11
CTC1-211ENST00000583254 PPM1AP35813 382 aa8.12□□□□□ -1.11
CTC1-211ENST00000583254 ARHGAP8P85298 464 aa8.12□□□□□ -1.11
CTC1-211ENST00000583254 KRT17Q04695 432 aa8.12□□□□□ -1.11
CTC1-211ENST00000583254 COL9A3Q14050 684 aaPredicted RBP8.12□□□□□ -1.11
CTC1-211ENST00000583254 ALX1Q15699 326 aa8.12□□□□□ -1.11
CTC1-211ENST00000583254 PPM1JQ5JR12 505 aa8.12□□□□□ -1.11
CTC1-211ENST00000583254 DIEXFQ68CQ4 756 aaKnown RBP8.12□□□□□ -1.11
CTC1-211ENST00000583254 LRRC55Q6ZSA7 311 aa8.12□□□□□ -1.11
CTC1-211ENST00000583254 MAML2Q8IZL2 1156 aaPredicted RBP8.12□□□□□ -1.11
CTC1-211ENST00000583254 MRPL43Q8N983 215 aaKnown RBP8.12□□□□□ -1.11
CTC1-211ENST00000583254 TRAPPC12Q8WVT3 735 aa8.12□□□□□ -1.11
CTC1-211ENST00000583254 RSAD2Q8WXG1 361 aa8.12□□□□□ -1.11
CTC1-211ENST00000583254 AUTS2Q8WXX7 1259 aa8.12□□□□□ -1.11
CTC1-211ENST00000583254 GLG1Q92896 1179 aa8.12□□□□□ -1.11
CTC1-211ENST00000583254 ZNF558Q96NG5 402 aa8.12□□□□□ -1.11
CTC1-211ENST00000583254 CELF4Q9BZC1 486 aaKnown RBP8.12□□□□□ -1.11
CTC1-211ENST00000583254 KAT14Q9H8E8 782 aa8.12□□□□□ -1.11
CTC1-211ENST00000583254 ATP6V0A4Q9HBG4 840 aa8.12□□□□□ -1.11
CTC1-211ENST00000583254 C1orf112Q9NSG2 853 aa8.12□□□□□ -1.11
CTC1-211ENST00000583254 MAP3K20Q9NYL2 800 aaKnown RBP8.12□□□□□ -1.11
CTC1-211ENST00000583254 ERAP1Q9NZ08 941 aa8.12□□□□□ -1.11
CTC1-211ENST00000583254 WNT16Q9UBV4 365 aa8.12□□□□□ -1.11
CTC1-211ENST00000583254 GINS2Q9Y248 185 aa8.12□□□□□ -1.11
CTC1-211ENST00000583254 ASPMQ8IZT6 3477 aa8.12□□□□□ -1.11
CTC1-211ENST00000583254 SPEGQ15772 3267 aa8.12□□□□□ -1.11
CTC1-211ENST00000583254 COL4A3Q01955 1670 aa8.11□□□□□ -1.11
CTC1-211ENST00000583254 FRMPD4Q14CM0 1322 aa8.11□□□□□ -1.11
CTC1-211ENST00000583254 KDM3AQ9Y4C1 1321 aa8.11□□□□□ -1.11
CTC1-211ENST00000583254 LAMA4Q16363 1823 aa8.11□□□□□ -1.11
CTC1-211ENST00000583254 GSTTP1A0A1W2PQM5 241 aa8.11□□□□□ -1.11
CTC1-211ENST00000583254 N4BP1O75113 896 aaKnown RBP8.11□□□□□ -1.11
CTC1-211ENST00000583254 LRRN2O75325 713 aa8.11□□□□□ -1.11
CTC1-211ENST00000583254 STAM2O75886 525 aa8.11□□□□□ -1.11
CTC1-211ENST00000583254 RPLP2P05387 115 aaKnown RBP8.11□□□□□ -1.11
CTC1-211ENST00000583254 PARP1P09874 1014 aaKnown RBP8.11□□□□□ -1.11
CTC1-211ENST00000583254 INSRRP14616 1297 aa8.11□□□□□ -1.11
CTC1-211ENST00000583254 GLULP15104 373 aa8.11□□□□□ -1.11
CTC1-211ENST00000583254 KRT76Q01546 638 aa8.11□□□□□ -1.11
CTC1-211ENST00000583254 DMWDQ09019 674 aa8.11□□□□□ -1.11
CTC1-211ENST00000583254 MFSD6Q6ZSS7 791 aa8.11□□□□□ -1.11
CTC1-211ENST00000583254 SLC24A5Q71RS6 500 aa8.11□□□□□ -1.11
CTC1-211ENST00000583254 CABP7Q86V35 215 aa8.11□□□□□ -1.11
CTC1-211ENST00000583254 DGKHQ86XP1 1220 aa8.11□□□□□ -1.11
CTC1-211ENST00000583254 LRRC43Q8N309 656 aa8.11□□□□□ -1.11
CTC1-211ENST00000583254 STAG2Q8N3U4 1231 aa8.11□□□□□ -1.11
CTC1-211ENST00000583254 GPR161Q8N6U8 529 aaKnown RBP8.11□□□□□ -1.11
CTC1-211ENST00000583254 PI4K2BQ8TCG2 481 aa8.11□□□□□ -1.11
CTC1-211ENST00000583254 COL26A1Q96A83 441 aa8.11□□□□□ -1.11
CTC1-211ENST00000583254 CASD1Q96PB1 797 aa8.11□□□□□ -1.11
CTC1-211ENST00000583254 FOXQ1Q9C009 403 aa8.11□□□□□ -1.11
CTC1-211ENST00000583254 TMEM117Q9H0C3 514 aa8.11□□□□□ -1.11
CTC1-211ENST00000583254 SH2B1Q9NRF2 756 aaPredicted RBP8.11□□□□□ -1.11
CTC1-211ENST00000583254 RGS18Q9NS28 235 aa8.11□□□□□ -1.11
CTC1-211ENST00000583254 RNF19AQ9NV58 838 aa8.11□□□□□ -1.11
CTC1-211ENST00000583254 TMEM161AQ9NX61 479 aa8.11□□□□□ -1.11
CTC1-211ENST00000583254 SPG21Q9NZD8 308 aa8.11□□□□□ -1.11
CTC1-211ENST00000583254 DDX19BQ9UMR2 479 aa8.11□□□□□ -1.11
CTC1-211ENST00000583254 SMG5Q9UPR3 1016 aaKnown RBP8.11□□□□□ -1.11
CTC1-211ENST00000583254 SIT1Q9Y3P8 196 aa8.11□□□□□ -1.11
CTC1-211ENST00000583254 NOC2LQ9Y3T9 749 aaKnown RBP8.11□□□□□ -1.11
CTC1-211ENST00000583254 ZZEF1O43149 2961 aa8.1□□□□□ -1.11
CTC1-211ENST00000583254 RRN3P2A6NIE6 340 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms