RNA–Protein interactions for RNA: ENST00000580646.5

GGA3-209, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-209ENST00000580646 FERMT3Q86UX7 667 aa11.11□□□□□ -0.63
GGA3-209ENST00000580646 MAFAQ8NHW3 353 aaPredicted RBP11.11□□□□□ -0.63
GGA3-209ENST00000580646 NEK9Q8TD19 979 aa11.11□□□□□ -0.63
GGA3-209ENST00000580646 LMBR1Q8WVP7 490 aa11.11□□□□□ -0.63
GGA3-209ENST00000580646 GLG1Q92896 1179 aa11.11□□□□□ -0.63
GGA3-209ENST00000580646 PCYT2Q99447 389 aa11.11□□□□□ -0.63
GGA3-209ENST00000580646 TMEM60Q9H2L4 133 aa11.11□□□□□ -0.63
GGA3-209ENST00000580646 UNC45AQ9H3U1 944 aa11.11□□□□□ -0.63
GGA3-209ENST00000580646 PRDM12Q9H4Q4 367 aa11.11□□□□□ -0.63
GGA3-209ENST00000580646 AZI2Q9H6S1 392 aa11.11□□□□□ -0.63
GGA3-209ENST00000580646 TTC12Q9H892 705 aaPredicted RBP11.11□□□□□ -0.63
GGA3-209ENST00000580646 MAFBQ9Y5Q3 323 aaPredicted RBP11.11□□□□□ -0.63
GGA3-209ENST00000580646 STK24Q9Y6E0 443 aa11.11□□□□□ -0.63
GGA3-209ENST00000580646 EVPLQ92817 2033 aa11.11□□□□□ -0.63
GGA3-209ENST00000580646 IGSF9BQ9UPX0 1349 aa11.1□□□□□ -0.63
GGA3-209ENST00000580646 TANC1Q9C0D5 1861 aa11.1□□□□□ -0.63
GGA3-209ENST00000580646 ABHD14A-ACY1A0A1B0GW23 586 aa11.1□□□□□ -0.63
GGA3-209ENST00000580646 DDX39AO00148 427 aaKnown RBP11.1□□□□□ -0.63
GGA3-209ENST00000580646 DKC1O60832 514 aaKnown RBP eCLIP11.1□□□□□ -0.63
GGA3-209ENST00000580646 CAND2O75155 1236 aa11.1□□□□□ -0.63
GGA3-209ENST00000580646 MARK3P27448 753 aa11.1□□□□□ -0.63
GGA3-209ENST00000580646 TXKP42681 527 aa11.1□□□□□ -0.63
GGA3-209ENST00000580646 STAT5BP51692 787 aa11.1□□□□□ -0.63
GGA3-209ENST00000580646 WDR5P61964 334 aaKnown RBP11.1□□□□□ -0.63
GGA3-209ENST00000580646 NUCB2P80303 420 aa11.1□□□□□ -0.63
GGA3-209ENST00000580646 PPFIA1Q13136 1202 aa11.1□□□□□ -0.63
GGA3-209ENST00000580646 IKBKEQ14164 716 aa11.1□□□□□ -0.63
GGA3-209ENST00000580646 PDIA5Q14554 519 aa11.1□□□□□ -0.63
GGA3-209ENST00000580646 EPHA7Q15375 998 aa11.1□□□□□ -0.63
GGA3-209ENST00000580646 TMEM266Q2M3C6 531 aa11.1□□□□□ -0.63
GGA3-209ENST00000580646 TCTN1Q2MV58 587 aa11.1□□□□□ -0.63
GGA3-209ENST00000580646 PPP2R2DQ66LE6 453 aa11.1□□□□□ -0.63
GGA3-209ENST00000580646 MIER3Q7Z3K6 550 aa11.1□□□□□ -0.63
GGA3-209ENST00000580646 HERC6Q8IVU3 1022 aa11.1□□□□□ -0.63
GGA3-209ENST00000580646 CCDC60Q8IWA6 550 aaPredicted RBP11.1□□□□□ -0.63
GGA3-209ENST00000580646 SPRYD3Q8NCJ5 442 aa11.1□□□□□ -0.63
GGA3-209ENST00000580646 DBF4BQ8NFT6 615 aa11.1□□□□□ -0.63
GGA3-209ENST00000580646 GAS2L1Q99501 681 aaPredicted RBP11.1□□□□□ -0.63
GGA3-209ENST00000580646 RAB34Q9BZG1 259 aa11.1□□□□□ -0.63
GGA3-209ENST00000580646 ZNF302Q9NR11 478 aa11.1□□□□□ -0.63
GGA3-209ENST00000580646 TTC28Q96AY4 2481 aa11.1□□□□□ -0.63
GGA3-209ENST00000580646 SCN5AQ14524 2016 aa11.09□□□□□ -0.63
GGA3-209ENST00000580646 COL1A2P08123 1366 aa11.09□□□□□ -0.63
GGA3-209ENST00000580646 RBAK-RBAKDNI3L0D1 243 aa11.09□□□□□ -0.63
GGA3-209ENST00000580646 EFCAB14O75071 495 aa11.09□□□□□ -0.63
GGA3-209ENST00000580646 P4HBP07237 508 aaKnown RBP11.09□□□□□ -0.63
GGA3-209ENST00000580646 CTSHP09668 335 aa11.09□□□□□ -0.63
GGA3-209ENST00000580646 COL9A1P20849 921 aa11.09□□□□□ -0.63
GGA3-209ENST00000580646 MUTP22033 750 aa11.09□□□□□ -0.63
GGA3-209ENST00000580646 NASPP49321 788 aaPredicted RBP11.09□□□□□ -0.63
GGA3-209ENST00000580646 PKP1Q13835 747 aa11.09□□□□□ -0.63
GGA3-209ENST00000580646 NBR1Q14596 966 aa11.09□□□□□ -0.63
GGA3-209ENST00000580646 GRIK4Q16099 956 aa11.09□□□□□ -0.63
GGA3-209ENST00000580646 IGSF22Q8N9C0 903 aa11.09□□□□□ -0.63
GGA3-209ENST00000580646 GJA10Q969M2 543 aa11.09□□□□□ -0.63
GGA3-209ENST00000580646 FAM167AQ96KS9 214 aa11.09□□□□□ -0.63
GGA3-209ENST00000580646 ZNF396Q96N95 335 aaPredicted RBP11.09□□□□□ -0.63
GGA3-209ENST00000580646 CIZ1Q9ULV3 898 aaPredicted RBP11.09□□□□□ -0.63
GGA3-209ENST00000580646 SAMM50Q9Y512 469 aa11.09□□□□□ -0.63
GGA3-209ENST00000580646 ATP6V1DQ9Y5K8 247 aa11.09□□□□□ -0.63
GGA3-209ENST00000580646 TET1Q8NFU7 2136 aa11.09□□□□□ -0.63
GGA3-209ENST00000580646 CDH23Q9H251 3354 aa11.08□□□□□ -0.64
GGA3-209ENST00000580646 RRN3P2A6NIE6 340 aa11.08□□□□□ -0.64
GGA3-209ENST00000580646 EML1O00423 815 aa11.08□□□□□ -0.64
GGA3-209ENST00000580646 BACH1O14867 736 aa11.08□□□□□ -0.64
GGA3-209ENST00000580646 SLC26A4O43511 780 aa11.08□□□□□ -0.64
GGA3-209ENST00000580646 CHMP2AO43633 222 aa11.08□□□□□ -0.64
GGA3-209ENST00000580646 TLL1O43897 1013 aa11.08□□□□□ -0.64
GGA3-209ENST00000580646 HBP1O60381 514 aa11.08□□□□□ -0.64
GGA3-209ENST00000580646 CA3P07451 260 aa11.08□□□□□ -0.64
GGA3-209ENST00000580646 INSRRP14616 1297 aa11.08□□□□□ -0.64
GGA3-209ENST00000580646 PSMC5P62195 406 aa11.08□□□□□ -0.64
GGA3-209ENST00000580646 IGBP1P78318 339 aa11.08□□□□□ -0.64
GGA3-209ENST00000580646 DEFB103AP81534 67 aa11.08□□□□□ -0.64
GGA3-209ENST00000580646 ADGRE1Q14246 886 aa11.08□□□□□ -0.64
GGA3-209ENST00000580646 PTPAQ15257 358 aa11.08□□□□□ -0.64
GGA3-209ENST00000580646 SF3A1Q15459 793 aaKnown RBP11.08□□□□□ -0.64
GGA3-209ENST00000580646 PLEKHG4Q58EX7 1191 aa11.08□□□□□ -0.64
GGA3-209ENST00000580646 FAM26DQ5JW98 314 aa11.08□□□□□ -0.64
GGA3-209ENST00000580646 SWSAP1Q6NVH7 229 aa11.08□□□□□ -0.64
GGA3-209ENST00000580646 TAF2Q6P1X5 1199 aa11.08□□□□□ -0.64
GGA3-209ENST00000580646 DTHD1Q6ZMT9 781 aa11.08□□□□□ -0.64
GGA3-209ENST00000580646 RPAINQ86UA6 219 aa11.08□□□□□ -0.64
GGA3-209ENST00000580646 KCTD17Q8N5Z5 321 aa11.08□□□□□ -0.64
GGA3-209ENST00000580646 ATP8B4Q8TF62 1192 aa11.08□□□□□ -0.64
GGA3-209ENST00000580646 BBXQ8WY36 941 aaPredicted RBP11.08□□□□□ -0.64
GGA3-209ENST00000580646 SEPT8Q92599 483 aa11.08□□□□□ -0.64
GGA3-209ENST00000580646 AK8Q96MA6 479 aa11.08□□□□□ -0.64
GGA3-209ENST00000580646 UIMC1Q96RL1 719 aa11.08□□□□□ -0.64
GGA3-209ENST00000580646 HSD17B14Q9BPX1 270 aa11.08□□□□□ -0.64
GGA3-209ENST00000580646 ZBED2Q9BTP6 218 aa11.08□□□□□ -0.64
GGA3-209ENST00000580646 OSBPL7Q9BZF2 842 aa11.08□□□□□ -0.64
GGA3-209ENST00000580646 GABBR1Q9UBS5 961 aa11.08□□□□□ -0.64
GGA3-209ENST00000580646 TUBE1Q9UJT0 475 aa11.08□□□□□ -0.64
GGA3-209ENST00000580646 ZDHHC9Q9Y397 364 aa11.08□□□□□ -0.64
GGA3-209ENST00000580646 PPME1Q9Y570 386 aa11.08□□□□□ -0.64
GGA3-209ENST00000580646 MBLAC1A4D2B0 266 aaPredicted RBP11.07□□□□□ -0.64
GGA3-209ENST00000580646 LYPLA2O95372 231 aa11.07□□□□□ -0.64
GGA3-209ENST00000580646 GJB5O95377 273 aa11.07□□□□□ -0.64
GGA3-209ENST00000580646 YEATS4O95619 227 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms