RNA–Protein interactions for RNA: ENST00000580219.5

SNX11-206, Transcript of sorting nexin 11, humanhuman

TSL 2 BASIC

Gene SNX11, Length 1,200 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-206ENST00000580219 PRR16Q569H4 304 aa10.93□□□□□ -0.66
SNX11-206ENST00000580219 FOXR2Q6PJQ5 311 aa10.93□□□□□ -0.66
SNX11-206ENST00000580219 CATSPERGQ6ZRH7 1159 aa10.93□□□□□ -0.66
SNX11-206ENST00000580219 UNC13DQ70J99 1090 aa10.93□□□□□ -0.66
SNX11-206ENST00000580219 NIPA1Q7RTP0 329 aa10.93□□□□□ -0.66
SNX11-206ENST00000580219 ADSSL1Q8N142 457 aa10.93□□□□□ -0.66
SNX11-206ENST00000580219 LRRC15Q8TF66 581 aa10.93□□□□□ -0.66
SNX11-206ENST00000580219 NOC3LQ8WTT2 800 aaKnown RBP10.93□□□□□ -0.66
SNX11-206ENST00000580219 TRIB2Q92519 343 aa10.93□□□□□ -0.66
SNX11-206ENST00000580219 STAMQ92783 540 aa10.93□□□□□ -0.66
SNX11-206ENST00000580219 DHTKD1Q96HY7 919 aaPredicted RBP10.93□□□□□ -0.66
SNX11-206ENST00000580219 MED15Q96RN5 788 aa10.93□□□□□ -0.66
SNX11-206ENST00000580219 PBX4Q9BYU1 374 aa10.93□□□□□ -0.66
SNX11-206ENST00000580219 TANGO6Q9C0B7 1094 aa10.93□□□□□ -0.66
SNX11-206ENST00000580219 KCNF1Q9H3M0 494 aa10.93□□□□□ -0.66
SNX11-206ENST00000580219 BLOC1S4Q9NUP1 217 aa10.93□□□□□ -0.66
SNX11-206ENST00000580219 EXOC1Q9NV70 894 aa10.93□□□□□ -0.66
SNX11-206ENST00000580219 FBXO28Q9NVF7 368 aa10.93□□□□□ -0.66
SNX11-206ENST00000580219 CCPG1Q9ULG6 757 aa10.93□□□□□ -0.66
SNX11-206ENST00000580219 BRWD1Q9NSI6 2320 aa10.92□□□□□ -0.66
SNX11-206ENST00000580219 FRMPD4Q14CM0 1322 aa10.92□□□□□ -0.66
SNX11-206ENST00000580219 IGLV3-22A0A075B6J6 115 aa10.92□□□□□ -0.66
SNX11-206ENST00000580219 NRDCO43847 1150 aa10.92□□□□□ -0.66
SNX11-206ENST00000580219 CFBP00751 764 aa10.92□□□□□ -0.66
SNX11-206ENST00000580219 CDK11BP21127 795 aaKnown RBP10.92□□□□□ -0.66
SNX11-206ENST00000580219 MUTP22033 750 aa10.92□□□□□ -0.66
SNX11-206ENST00000580219 HOXA13P31271 388 aaPredicted RBP10.92□□□□□ -0.66
SNX11-206ENST00000580219 ZNF76P36508 570 aa10.92□□□□□ -0.66
SNX11-206ENST00000580219 CCT6AP40227 531 aaKnown RBP10.92□□□□□ -0.66
SNX11-206ENST00000580219 ASIC1P78348 528 aa10.92□□□□□ -0.66
SNX11-206ENST00000580219 SPIRE1Q08AE8 756 aa10.92□□□□□ -0.66
SNX11-206ENST00000580219 PSMD2Q13200 908 aa10.92□□□□□ -0.66
SNX11-206ENST00000580219 MAP3K21Q5TCX8 1036 aa10.92□□□□□ -0.66
SNX11-206ENST00000580219 VSTM4Q8IW00 320 aa10.92□□□□□ -0.66
SNX11-206ENST00000580219 LRRC8AQ8IWT6 810 aa10.92□□□□□ -0.66
SNX11-206ENST00000580219 PRSS33Q8NF86 280 aa10.92□□□□□ -0.66
SNX11-206ENST00000580219 KIAA1524Q8TCG1 905 aa10.92□□□□□ -0.66
SNX11-206ENST00000580219 NELFBQ8WX92 580 aa10.92□□□□□ -0.66
SNX11-206ENST00000580219 KRTAP3-3Q9BYR6 98 aa10.92□□□□□ -0.66
SNX11-206ENST00000580219 KRTAP3-2Q9BYR7 98 aa10.92□□□□□ -0.66
SNX11-206ENST00000580219 SPTLC3Q9NUV7 552 aa10.92□□□□□ -0.66
SNX11-206ENST00000580219 LHX6Q9UPM6 363 aa10.92□□□□□ -0.66
SNX11-206ENST00000580219 CTNND2Q9UQB3 1225 aa10.92□□□□□ -0.66
SNX11-206ENST00000580219 FAM186AA6NE01 2351 aa10.92□□□□□ -0.66
SNX11-206ENST00000580219 UNC79Q9P2D8 2635 aa10.91□□□□□ -0.66
SNX11-206ENST00000580219 A0A1B0GTH6 734 aa10.91□□□□□ -0.66
SNX11-206ENST00000580219 BICDL2A1A5D9 508 aa10.91□□□□□ -0.66
SNX11-206ENST00000580219 LRRC10BA6NIK2 292 aa10.91□□□□□ -0.66
SNX11-206ENST00000580219 FAM86B1E9PN63 330 aa10.91□□□□□ -0.66
SNX11-206ENST00000580219 MSH4O15457 936 aa10.91□□□□□ -0.66
SNX11-206ENST00000580219 FLOT1O75955 427 aa10.91□□□□□ -0.66
SNX11-206ENST00000580219 FAM86B2P0C5J1 330 aa10.91□□□□□ -0.66
SNX11-206ENST00000580219 RPA1P27694 616 aa10.91□□□□□ -0.66
SNX11-206ENST00000580219 PRCPP42785 496 aa10.91□□□□□ -0.66
SNX11-206ENST00000580219 KCNJ6P48051 423 aa10.91□□□□□ -0.66
SNX11-206ENST00000580219 PDE4DQ08499 809 aa10.91□□□□□ -0.66
SNX11-206ENST00000580219 PABPC4Q13310 644 aaKnown RBP eCLIP10.91□□□□□ -0.66
SNX11-206ENST00000580219 MCM6Q14566 821 aa10.91□□□□□ -0.66
SNX11-206ENST00000580219 TPD52L1Q16890 204 aaPredicted RBP10.91□□□□□ -0.66
SNX11-206ENST00000580219 CCDC144BQ3MJ40 725 aa10.91□□□□□ -0.66
SNX11-206ENST00000580219 CEP55Q53EZ4 464 aa10.91□□□□□ -0.66
SNX11-206ENST00000580219 KLHL10Q6JEL2 608 aa10.91□□□□□ -0.66
SNX11-206ENST00000580219 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.91□□□□□ -0.66
SNX11-206ENST00000580219 FCHSD1Q86WN1 690 aa10.91□□□□□ -0.66
SNX11-206ENST00000580219 TRMT44Q8IYL2 757 aaKnown RBP10.91□□□□□ -0.66
SNX11-206ENST00000580219 ANKRD20A12PQ8NF67 263 aa10.91□□□□□ -0.66
SNX11-206ENST00000580219 CLEC4DQ8WXI8 215 aa10.91□□□□□ -0.66
SNX11-206ENST00000580219 PLIN2Q99541 437 aa10.91□□□□□ -0.66
SNX11-206ENST00000580219 POLR3CQ9BUI4 534 aaPredicted RBP10.91□□□□□ -0.66
SNX11-206ENST00000580219 WDR11Q9BZH6 1224 aa10.91□□□□□ -0.66
SNX11-206ENST00000580219 NRBP1Q9UHY1 535 aa10.91□□□□□ -0.66
SNX11-206ENST00000580219 VAV3Q9UKW4 847 aa10.91□□□□□ -0.66
SNX11-206ENST00000580219 SLC45A1Q9Y2W3 748 aa10.91□□□□□ -0.66
SNX11-206ENST00000580219 CTDP1Q9Y5B0 961 aaPredicted RBP10.91□□□□□ -0.66
SNX11-206ENST00000580219 FASNP49327 2511 aaKnown RBP10.9□□□□□ -0.66
SNX11-206ENST00000580219 PLXNA3P51805 1871 aa10.9□□□□□ -0.66
SNX11-206ENST00000580219 MYMKA6NI61 221 aa10.9□□□□□ -0.66
SNX11-206ENST00000580219 SPDYE16A6NNV3 312 aaPredicted RBP10.9□□□□□ -0.66
SNX11-206ENST00000580219 MEIS1O00470 390 aa10.9□□□□□ -0.66
SNX11-206ENST00000580219 ATP2A1O14983 1001 aa10.9□□□□□ -0.66
SNX11-206ENST00000580219 ALADP13716 330 aa10.9□□□□□ -0.66
SNX11-206ENST00000580219 CCNE1P24864 410 aa10.9□□□□□ -0.66
SNX11-206ENST00000580219 ID4P47928 161 aa10.9□□□□□ -0.66
SNX11-206ENST00000580219 PTPN5P54829 565 aa10.9□□□□□ -0.66
SNX11-206ENST00000580219 IRX3P78415 501 aaPredicted RBP10.9□□□□□ -0.66
SNX11-206ENST00000580219 EHHADHQ08426 723 aa10.9□□□□□ -0.66
SNX11-206ENST00000580219 PPP2R5CQ13362 524 aa10.9□□□□□ -0.66
SNX11-206ENST00000580219 TKFCQ3LXA3 575 aa10.9□□□□□ -0.66
SNX11-206ENST00000580219 FILIP1LQ4L180 1135 aa10.9□□□□□ -0.66
SNX11-206ENST00000580219 XRRA1Q6P2D8 792 aa10.9□□□□□ -0.66
SNX11-206ENST00000580219 TMC6Q7Z403 805 aa10.9□□□□□ -0.66
SNX11-206ENST00000580219 FILIP1Q7Z7B0 1213 aa10.9□□□□□ -0.66
SNX11-206ENST00000580219 SMYD4Q8IYR2 804 aaPredicted RBP10.9□□□□□ -0.66
SNX11-206ENST00000580219 ZNF687Q8N1G0 1237 aa10.9□□□□□ -0.66
SNX11-206ENST00000580219 CCDC112Q8NEF3 446 aa10.9□□□□□ -0.66
SNX11-206ENST00000580219 CACTINQ8WUQ7 758 aaKnown RBP10.9□□□□□ -0.66
SNX11-206ENST00000580219 HERVK_113Q902F9 699 aa10.9□□□□□ -0.66
SNX11-206ENST00000580219 SLC5A5Q92911 643 aa10.9□□□□□ -0.66
SNX11-206ENST00000580219 AGBL1Q96MI9 1066 aa10.9□□□□□ -0.66
SNX11-206ENST00000580219 ZNF830Q96NB3 372 aaPredicted RBP10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms