RNA–Protein interactions for RNA: ENST00000579727.5

RARA-209, Transcript of retinoic acid receptor alpha, humanhuman

TSL 4

Gene RARA, Length 564 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-209ENST00000579727 C22orf31O95567 290 aa18.35■□□□□ 0.53
RARA-209ENST00000579727 OR52Z1P0C646 297 aa18.35■□□□□ 0.53
RARA-209ENST00000579727 CTTNQ14247 550 aaKnown RBP18.35■□□□□ 0.53
RARA-209ENST00000579727 MTERF2Q49AM1 385 aa18.35■□□□□ 0.53
RARA-209ENST00000579727 PLA2G4FQ68DD2 849 aa18.35■□□□□ 0.53
RARA-209ENST00000579727 TAF2Q6P1X5 1199 aa18.35■□□□□ 0.53
RARA-209ENST00000579727 INTS4Q96HW7 963 aaKnown RBP18.35■□□□□ 0.53
RARA-209ENST00000579727 PPP1R16BQ96T49 567 aa18.35■□□□□ 0.53
RARA-209ENST00000579727 LXNQ9BS40 222 aa18.35■□□□□ 0.53
RARA-209ENST00000579727 PCDHA2Q9Y5H9 948 aa18.35■□□□□ 0.53
RARA-209ENST00000579727 PTPRSQ13332 1948 aa18.35■□□□□ 0.53
RARA-209ENST00000579727 DDX11L8A8MPP1 907 aa18.34■□□□□ 0.53
RARA-209ENST00000579727 STBD1O95210 358 aa18.34■□□□□ 0.53
RARA-209ENST00000579727 TECP42680 631 aa18.34■□□□□ 0.53
RARA-209ENST00000579727 TRAPPC10P48553 1259 aa18.34■□□□□ 0.53
RARA-209ENST00000579727 PSMC5P62195 406 aa18.34■□□□□ 0.53
RARA-209ENST00000579727 EPHA7Q15375 998 aa18.34■□□□□ 0.53
RARA-209ENST00000579727 CDX2Q99626 313 aaPredicted RBP18.34■□□□□ 0.53
RARA-209ENST00000579727 NRBP2Q9NSY0 501 aa18.34■□□□□ 0.53
RARA-209ENST00000579727 CDY2AQ9Y6F7 541 aa18.34■□□□□ 0.53
RARA-209ENST00000579727 GRXCR1A8MXD5 290 aa18.33■□□□□ 0.52
RARA-209ENST00000579727 CHRNA1P02708 482 aa18.33■□□□□ 0.52
RARA-209ENST00000579727 PFKMP08237 780 aa18.33■□□□□ 0.52
RARA-209ENST00000579727 SYT1P21579 422 aa18.33■□□□□ 0.52
RARA-209ENST00000579727 QARSP47897 775 aaKnown RBP18.33■□□□□ 0.52
RARA-209ENST00000579727 CLCN3P51790 818 aa18.33■□□□□ 0.52
RARA-209ENST00000579727 MGAT3Q09327 533 aa18.33■□□□□ 0.52
RARA-209ENST00000579727 XKR3Q5GH77 459 aa18.33■□□□□ 0.52
RARA-209ENST00000579727 RSPH3Q86UC2 560 aa18.33■□□□□ 0.52
RARA-209ENST00000579727 LRRC71Q8N4P6 559 aa18.33■□□□□ 0.52
RARA-209ENST00000579727 METTL13Q8N6R0 699 aa18.33■□□□□ 0.52
RARA-209ENST00000579727 HERVK_113Q902F9 699 aa18.33■□□□□ 0.52
RARA-209ENST00000579727 EIF2AK1Q9BQI3 630 aaKnown RBP18.33■□□□□ 0.52
RARA-209ENST00000579727 BMP2KQ9NSY1 1161 aaPredicted RBP18.33■□□□□ 0.52
RARA-209ENST00000579727 CEP131Q9UPN4 1083 aa18.33■□□□□ 0.52
RARA-209ENST00000579727 SMIM35A0A1B0GVV1 85 aa18.32■□□□□ 0.52
RARA-209ENST00000579727 CAND2O75155 1236 aa18.32■□□□□ 0.52
RARA-209ENST00000579727 CXCL10P02778 98 aa18.32■□□□□ 0.52
RARA-209ENST00000579727 P4HBP07237 508 aaKnown RBP18.32■□□□□ 0.52
RARA-209ENST00000579727 HSP90AA1P07900 732 aaKnown RBP18.32■□□□□ 0.52
RARA-209ENST00000579727 GHRP10912 638 aa18.32■□□□□ 0.52
RARA-209ENST00000579727 ACTN1P12814 892 aa18.32■□□□□ 0.52
RARA-209ENST00000579727 PDCP20941 246 aa18.32■□□□□ 0.52
RARA-209ENST00000579727 MRPS6P82932 125 aaKnown RBP18.32■□□□□ 0.52
RARA-209ENST00000579727 PTGDRQ13258 359 aa18.32■□□□□ 0.52
RARA-209ENST00000579727 ORC2Q13416 577 aaPredicted RBP18.32■□□□□ 0.52
RARA-209ENST00000579727 ZNF697Q5TEC3 545 aa18.32■□□□□ 0.52
RARA-209ENST00000579727 ANO5Q75V66 913 aa18.32■□□□□ 0.52
RARA-209ENST00000579727 TPH2Q8IWU9 490 aa18.32■□□□□ 0.52
RARA-209ENST00000579727 C4orf32Q8N8J7 132 aa18.32■□□□□ 0.52
RARA-209ENST00000579727 MAFAQ8NHW3 353 aaPredicted RBP18.32■□□□□ 0.52
RARA-209ENST00000579727 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.32■□□□□ 0.52
RARA-209ENST00000579727 MUC3AQ02505 3323 aa18.31■□□□□ 0.52
RARA-209ENST00000579727 ZBTB39O15060 712 aa18.31■□□□□ 0.52
RARA-209ENST00000579727 VTNP04004 478 aa18.31■□□□□ 0.52
RARA-209ENST00000579727 COL9A1P20849 921 aa18.31■□□□□ 0.52
RARA-209ENST00000579727 NPEPPSP55786 919 aa18.31■□□□□ 0.52
RARA-209ENST00000579727 RILPL1Q5EBL4 403 aa18.31■□□□□ 0.52
RARA-209ENST00000579727 FAM26DQ5JW98 314 aa18.31■□□□□ 0.52
RARA-209ENST00000579727 RASIP1Q5U651 963 aa18.31■□□□□ 0.52
RARA-209ENST00000579727 EFCAB12Q6NXP0 572 aa18.31■□□□□ 0.52
RARA-209ENST00000579727 CNKSR3Q6P9H4 555 aa18.31■□□□□ 0.52
RARA-209ENST00000579727 ZNF579Q8NAF0 562 aaKnown RBP18.31■□□□□ 0.52
RARA-209ENST00000579727 DBF4BQ8NFT6 615 aa18.31■□□□□ 0.52
RARA-209ENST00000579727 ZNF668Q96K58 619 aaPredicted RBP18.31■□□□□ 0.52
RARA-209ENST00000579727 MTIF3Q9H2K0 278 aaKnown RBP18.31■□□□□ 0.52
RARA-209ENST00000579727 SUGCTQ9HAC7 445 aa18.31■□□□□ 0.52
RARA-209ENST00000579727 RAPGEFL1Q9UHV5 662 aa18.31■□□□□ 0.52
RARA-209ENST00000579727 GINS2Q9Y248 185 aa18.31■□□□□ 0.52
RARA-209ENST00000579727 TRPV2Q9Y5S1 764 aa18.31■□□□□ 0.52
RARA-209ENST00000579727 MICAL3Q7RTP6 2002 aa18.3■□□□□ 0.52
RARA-209ENST00000579727 MYH15Q9Y2K3 1946 aa18.3■□□□□ 0.52
RARA-209ENST00000579727 A0A087WWV3 80 aa18.3■□□□□ 0.52
RARA-209ENST00000579727 M0QZ92 97 aa18.3■□□□□ 0.52
RARA-209ENST00000579727 SLITRK3O94933 977 aa18.3■□□□□ 0.52
RARA-209ENST00000579727 PARNO95453 639 aaKnown RBP18.3■□□□□ 0.52
RARA-209ENST00000579727 TBC1D8BQ0IIM8 1120 aa18.3■□□□□ 0.52
RARA-209ENST00000579727 LPIN1Q14693 890 aa18.3■□□□□ 0.52
RARA-209ENST00000579727 TARBP2Q15633 366 aaKnown RBP18.3■□□□□ 0.52
RARA-209ENST00000579727 TMEM266Q2M3C6 531 aa18.3■□□□□ 0.52
RARA-209ENST00000579727 TMCO2Q7Z6W1 182 aaPredicted RBP18.3■□□□□ 0.52
RARA-209ENST00000579727 RPAINQ86UA6 219 aa18.3■□□□□ 0.52
RARA-209ENST00000579727 KIAA0319LQ8IZA0 1049 aa18.3■□□□□ 0.52
RARA-209ENST00000579727 NIFKQ9BYG3 293 aaKnown RBP18.3■□□□□ 0.52
RARA-209ENST00000579727 AKT3Q9Y243 479 aa18.3■□□□□ 0.52
RARA-209ENST00000579727 SLC4A7Q9Y6M7 1214 aa18.3■□□□□ 0.52
RARA-209ENST00000579727 DKC1O60832 514 aaKnown RBP eCLIP18.29■□□□□ 0.52
RARA-209ENST00000579727 MED24O75448 989 aa18.29■□□□□ 0.52
RARA-209ENST00000579727 YWHABP31946 246 aaKnown RBP18.29■□□□□ 0.52
RARA-209ENST00000579727 RESTQ13127 1097 aa18.29■□□□□ 0.52
RARA-209ENST00000579727 DRP2Q13474 957 aa18.29■□□□□ 0.52
RARA-209ENST00000579727 FBXO47Q5MNV8 452 aa18.29■□□□□ 0.52
RARA-209ENST00000579727 IER5Q5VY09 327 aa18.29■□□□□ 0.52
RARA-209ENST00000579727 FAM173BQ6P4H8 233 aa18.29■□□□□ 0.52
RARA-209ENST00000579727 MYLIPQ8WY64 445 aa18.29■□□□□ 0.52
RARA-209ENST00000579727 CEP170P1Q96L14 293 aa18.29■□□□□ 0.52
RARA-209ENST00000579727 CEP89Q96ST8 783 aa18.29■□□□□ 0.52
RARA-209ENST00000579727 SEMA6BQ9H3T3 888 aa18.29■□□□□ 0.52
RARA-209ENST00000579727 ZSWIM4Q9H7M6 989 aa18.29■□□□□ 0.52
RARA-209ENST00000579727 CDHR5Q9HBB8 845 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms