RNA–Protein interactions for RNA: ENST00000579662.5

ITGB4-206, Transcript of integrin subunit beta 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ITGB4, Length 5,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-206ENST00000579662 QARSP47897 775 aaKnown RBP16.38■□□□□ 0.21
ITGB4-206ENST00000579662 C2orf54Q08AI8 447 aa16.38■□□□□ 0.21
ITGB4-206ENST00000579662 ERICH1Q86X53 443 aa16.38■□□□□ 0.21
ITGB4-206ENST00000579662 ACAD9Q9H845 621 aa16.38■□□□□ 0.21
ITGB4-206ENST00000579662 TOPORSQ9NS56 1045 aaPredicted RBP16.38■□□□□ 0.21
ITGB4-206ENST00000579662 DNAJC12Q9UKB3 198 aa16.38■□□□□ 0.21
ITGB4-206ENST00000579662 ATP2C1P98194 919 aaPredicted RBP16.37■□□□□ 0.21
ITGB4-206ENST00000579662 BARGINQ6ZT62 677 aa16.37■□□□□ 0.21
ITGB4-206ENST00000579662 KRT10P13645 584 aa16.37■□□□□ 0.21
ITGB4-206ENST00000579662 ARL13BQ3SXY8 428 aa16.37■□□□□ 0.21
ITGB4-206ENST00000579662 SH2D4BQ5SQS7 431 aa16.37■□□□□ 0.21
ITGB4-206ENST00000579662 RPUSD2Q8IZ73 545 aaKnown RBP16.37■□□□□ 0.21
ITGB4-206ENST00000579662 UHMK1Q8TAS1 419 aaKnown RBP16.37■□□□□ 0.21
ITGB4-206ENST00000579662 TBC1D16Q8TBP0 767 aa16.37■□□□□ 0.21
ITGB4-206ENST00000579662 TMEM260Q9NX78 707 aa16.37■□□□□ 0.21
ITGB4-206ENST00000579662 MIF4GDA9UHW6 222 aaKnown RBP16.37■□□□□ 0.21
ITGB4-206ENST00000579662 E9PMD0 336 aa16.37■□□□□ 0.21
ITGB4-206ENST00000579662 CLDN3O15551 220 aa16.37■□□□□ 0.21
ITGB4-206ENST00000579662 KNOP1Q1ED39 458 aaKnown RBP16.37■□□□□ 0.21
ITGB4-206ENST00000579662 STRIP1Q5VSL9 837 aa16.37■□□□□ 0.21
ITGB4-206ENST00000579662 POC1B-GALNT4F8VUJ3 575 aa16.37■□□□□ 0.21
ITGB4-206ENST00000579662 CCDC188H7C350 402 aa16.37■□□□□ 0.21
ITGB4-206ENST00000579662 SLC26A4O43511 780 aa16.37■□□□□ 0.21
ITGB4-206ENST00000579662 GSTA1P08263 222 aa16.37■□□□□ 0.21
ITGB4-206ENST00000579662 GSTA2P09210 222 aa16.37■□□□□ 0.21
ITGB4-206ENST00000579662 KPNA2P52292 529 aaKnown RBP16.37■□□□□ 0.21
ITGB4-206ENST00000579662 PLTPP55058 493 aa16.37■□□□□ 0.21
ITGB4-206ENST00000579662 SCARF1Q14162 830 aa16.37■□□□□ 0.21
ITGB4-206ENST00000579662 TTLL4Q14679 1199 aa16.37■□□□□ 0.21
ITGB4-206ENST00000579662 PTPN21Q16825 1174 aa16.37■□□□□ 0.21
ITGB4-206ENST00000579662 CCNYQ8ND76 341 aa16.37■□□□□ 0.21
ITGB4-206ENST00000579662 ABT1Q9ULW3 272 aaKnown RBP16.37■□□□□ 0.21
ITGB4-206ENST00000579662 PSMC5P62195 406 aa16.37■□□□□ 0.21
ITGB4-206ENST00000579662 CUL1Q13616 776 aa16.37■□□□□ 0.21
ITGB4-206ENST00000579662 TAB3Q8N5C8 712 aaPredicted RBP16.37■□□□□ 0.21
ITGB4-206ENST00000579662 INTS9Q9NV88 658 aaKnown RBP16.37■□□□□ 0.21
ITGB4-206ENST00000579662 LRRD1A4D1F6 860 aa16.36■□□□□ 0.21
ITGB4-206ENST00000579662 CCDC151A5D8V7 595 aa16.36■□□□□ 0.21
ITGB4-206ENST00000579662 CASQ2O14958 399 aaPredicted RBP16.36■□□□□ 0.21
ITGB4-206ENST00000579662 SNX1Q13596 522 aa16.36■□□□□ 0.21
ITGB4-206ENST00000579662 NXNQ6DKJ4 435 aa16.36■□□□□ 0.21
ITGB4-206ENST00000579662 MYL3P08590 195 aa16.36■□□□□ 0.21
ITGB4-206ENST00000579662 MSH2P43246 934 aa16.36■□□□□ 0.21
ITGB4-206ENST00000579662 DR1Q01658 176 aa16.36■□□□□ 0.21
ITGB4-206ENST00000579662 NAA25Q14CX7 972 aa16.36■□□□□ 0.21
ITGB4-206ENST00000579662 KIAA1841Q6NSI8 718 aa16.36■□□□□ 0.21
ITGB4-206ENST00000579662 DSTYKQ6XUX3 929 aa16.36■□□□□ 0.21
ITGB4-206ENST00000579662 RAB44Q7Z6P3 723 aaPredicted RBP16.36■□□□□ 0.21
ITGB4-206ENST00000579662 BCAS4Q8TDM0 211 aa16.36■□□□□ 0.21
ITGB4-206ENST00000579662 CPSF3Q9UKF6 684 aaKnown RBP16.36■□□□□ 0.21
ITGB4-206ENST00000579662 NRXN1Q9ULB1 1477 aa16.36■□□□□ 0.21
ITGB4-206ENST00000579662 SFI1A8K8P3 1242 aa16.36■□□□□ 0.21
ITGB4-206ENST00000579662 NAALADL2Q58DX5 795 aa16.36■□□□□ 0.21
ITGB4-206ENST00000579662 CALN1Q9BXU9 219 aa16.36■□□□□ 0.21
ITGB4-206ENST00000579662 ABHD10Q9NUJ1 306 aa16.36■□□□□ 0.21
ITGB4-206ENST00000579662 PRCPP42785 496 aa16.36■□□□□ 0.21
ITGB4-206ENST00000579662 SCARA5Q6ZMJ2 495 aa16.36■□□□□ 0.21
ITGB4-206ENST00000579662 CLEC17AQ6ZS10 378 aa16.36■□□□□ 0.21
ITGB4-206ENST00000579662 GUF1Q8N442 669 aaKnown RBP16.36■□□□□ 0.21
ITGB4-206ENST00000579662 CPVLQ9H3G5 476 aa16.36■□□□□ 0.21
ITGB4-206ENST00000579662 CNOT10Q9H9A5 744 aaKnown RBP16.36■□□□□ 0.21
ITGB4-206ENST00000579662 USH1CQ9Y6N9 552 aa16.36■□□□□ 0.21
ITGB4-206ENST00000579662 SUN1O94901 812 aa16.35■□□□□ 0.21
ITGB4-206ENST00000579662 AKR1B1P15121 316 aa16.35■□□□□ 0.21
ITGB4-206ENST00000579662 EIF3BP55884 814 aaKnown RBP16.35■□□□□ 0.21
ITGB4-206ENST00000579662 PPARDQ03181 441 aa16.35■□□□□ 0.21
ITGB4-206ENST00000579662 GLE1Q53GS7 698 aaKnown RBP16.35■□□□□ 0.21
ITGB4-206ENST00000579662 POTEB3A0JP26 581 aa16.35■□□□□ 0.21
ITGB4-206ENST00000579662 FAM196BA6NMK8 535 aa16.35■□□□□ 0.21
ITGB4-206ENST00000579662 POTECB2RU33 542 aa16.35■□□□□ 0.21
ITGB4-206ENST00000579662 ALS2CLQ60I27 953 aa16.35■□□□□ 0.21
ITGB4-206ENST00000579662 PHLDB3Q6NSJ2 640 aa16.35■□□□□ 0.21
ITGB4-206ENST00000579662 POTEBQ6S5H4 581 aa16.35■□□□□ 0.21
ITGB4-206ENST00000579662 EFCAB13Q8IY85 973 aa16.35■□□□□ 0.21
ITGB4-206ENST00000579662 TTC39CQ8N584 583 aa16.35■□□□□ 0.21
ITGB4-206ENST00000579662 KDM6AO15550 1401 aaPredicted RBP16.35■□□□□ 0.21
ITGB4-206ENST00000579662 TBXAS1P24557 533 aaPredicted RBP16.35■□□□□ 0.21
ITGB4-206ENST00000579662 RNF139Q8WU17 664 aa16.35■□□□□ 0.21
ITGB4-206ENST00000579662 PSPC1Q8WXF1 523 aaKnown RBP16.35■□□□□ 0.21
ITGB4-206ENST00000579662 PRKAG2Q9UGJ0 569 aa16.35■□□□□ 0.21
ITGB4-206ENST00000579662 PRPF31Q8WWY3 499 aaKnown RBP16.35■□□□□ 0.21
ITGB4-206ENST00000579662 OSBPL5Q9H0X9 879 aaPredicted RBP16.35■□□□□ 0.21
ITGB4-206ENST00000579662 ADAMTS1Q9UHI8 967 aa16.35■□□□□ 0.21
ITGB4-206ENST00000579662 CPS1P31327 1500 aa16.35■□□□□ 0.21
ITGB4-206ENST00000579662 CYP27A1Q02318 531 aa16.35■□□□□ 0.21
ITGB4-206ENST00000579662 PSMD6Q15008 389 aa16.35■□□□□ 0.21
ITGB4-206ENST00000579662 TMEM35BQ8NCS4 154 aa16.35■□□□□ 0.21
ITGB4-206ENST00000579662 TIPINQ9BVW5 301 aa16.35■□□□□ 0.21
ITGB4-206ENST00000579662 STRIP2Q9ULQ0 834 aa16.35■□□□□ 0.21
ITGB4-206ENST00000579662 ZNF609O15014 1411 aa16.34■□□□□ 0.21
ITGB4-206ENST00000579662 CALB1P05937 261 aa16.34■□□□□ 0.21
ITGB4-206ENST00000579662 PDIA5Q14554 519 aa16.34■□□□□ 0.21
ITGB4-206ENST00000579662 KCNV1Q6PIU1 500 aa16.34■□□□□ 0.21
ITGB4-206ENST00000579662 TTC1Q99614 292 aa16.34■□□□□ 0.21
ITGB4-206ENST00000579662 TUFT1Q9NNX1 390 aa16.34■□□□□ 0.21
ITGB4-206ENST00000579662 ATP8A1Q9Y2Q0 1164 aa16.34■□□□□ 0.21
ITGB4-206ENST00000579662 ADAMTS13Q76LX8 1427 aa16.34■□□□□ 0.21
ITGB4-206ENST00000579662 ANO9A1A5B4 782 aa16.34■□□□□ 0.21
ITGB4-206ENST00000579662 DHX9Q08211 1270 aaKnown RBP16.34■□□□□ 0.21
ITGB4-206ENST00000579662 MKRN3Q13064 507 aaKnown RBP16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms