RNA–Protein interactions for RNA: ENST00000578995.5

SMARCE1-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, human

TSL 2

Gene SMARCE1, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMARCE1-215	ENST00000578995	PFKFB2	O60825	505 aa		4.4	□□□□□ -1.71
SMARCE1-215	ENST00000578995	DTNB	O60941	627 aa		4.4	□□□□□ -1.71
SMARCE1-215	ENST00000578995	ICAM1	P05362	532 aa		4.4	□□□□□ -1.71
SMARCE1-215	ENST00000578995	HOXC6	P09630	235 aa		4.4	□□□□□ -1.71
SMARCE1-215	ENST00000578995	PARP1	P09874	1014 aa	Known RBP	4.4	□□□□□ -1.71
SMARCE1-215	ENST00000578995	RARA	P10276	462 aa		4.4	□□□□□ -1.71
SMARCE1-215	ENST00000578995	IFNAR1	P17181	557 aa		4.4	□□□□□ -1.71
SMARCE1-215	ENST00000578995	PSMA5	P28066	241 aa		4.4	□□□□□ -1.71
SMARCE1-215	ENST00000578995	NEK4	P51957	841 aa		4.4	□□□□□ -1.71
SMARCE1-215	ENST00000578995	LBX1	P52954	281 aa		4.4	□□□□□ -1.71
SMARCE1-215	ENST00000578995	IRX3	P78415	501 aa	Predicted RBP	4.4	□□□□□ -1.71
SMARCE1-215	ENST00000578995	SP3	Q02447	781 aa		4.4	□□□□□ -1.71
SMARCE1-215	ENST00000578995	PABPC4	Q13310	644 aa	Known RBP eCLIP	4.4	□□□□□ -1.71
SMARCE1-215	ENST00000578995	GRB14	Q14449	540 aa		4.4	□□□□□ -1.71
SMARCE1-215	ENST00000578995	RABEP1	Q15276	862 aa		4.4	□□□□□ -1.71
SMARCE1-215	ENST00000578995	CDC37	Q16543	378 aa	Predicted RBP	4.4	□□□□□ -1.71
SMARCE1-215	ENST00000578995	RTN1	Q16799	776 aa		4.4	□□□□□ -1.71
SMARCE1-215	ENST00000578995	CCDC96	Q2M329	555 aa		4.4	□□□□□ -1.71
SMARCE1-215	ENST00000578995	IER5	Q5VY09	327 aa		4.4	□□□□□ -1.71
SMARCE1-215	ENST00000578995	OTOP1	Q7RTM1	612 aa		4.4	□□□□□ -1.71
SMARCE1-215	ENST00000578995	MICU3	Q86XE3	530 aa		4.4	□□□□□ -1.71
SMARCE1-215	ENST00000578995	CMTR1	Q8N1G2	835 aa	Known RBP	4.4	□□□□□ -1.71
SMARCE1-215	ENST00000578995	TMTC2	Q8N394	836 aa		4.4	□□□□□ -1.71
SMARCE1-215	ENST00000578995	MB21D1	Q8N884	522 aa		4.4	□□□□□ -1.71
SMARCE1-215	ENST00000578995	GALNT11	Q8NCW6	608 aa		4.4	□□□□□ -1.71
SMARCE1-215	ENST00000578995	SMARCC2	Q8TAQ2	1214 aa		4.4	□□□□□ -1.71
SMARCE1-215	ENST00000578995	CD99L2	Q8TCZ2	262 aa		4.4	□□□□□ -1.71
SMARCE1-215	ENST00000578995	GTF3C2	Q8WUA4	911 aa	Predicted RBP	4.4	□□□□□ -1.71
SMARCE1-215	ENST00000578995	GTF3C6	Q969F1	213 aa		4.4	□□□□□ -1.71
SMARCE1-215	ENST00000578995	CHMP4C	Q96CF2	233 aa		4.4	□□□□□ -1.71
SMARCE1-215	ENST00000578995	PCMTD1	Q96MG8	357 aa	Predicted RBP	4.4	□□□□□ -1.71
SMARCE1-215	ENST00000578995	PIGS	Q96S52	555 aa		4.4	□□□□□ -1.71
SMARCE1-215	ENST00000578995	TEX13B	Q9BXU2	312 aa		4.4	□□□□□ -1.71
SMARCE1-215	ENST00000578995	KATNBL1	Q9H079	304 aa		4.4	□□□□□ -1.71
SMARCE1-215	ENST00000578995	NCOA5	Q9HCD5	579 aa	Known RBP	4.4	□□□□□ -1.71
SMARCE1-215	ENST00000578995	RAVER2	Q9HCJ3	691 aa	Known RBP	4.4	□□□□□ -1.71
SMARCE1-215	ENST00000578995	C11orf16	Q9NQ32	467 aa		4.4	□□□□□ -1.71
SMARCE1-215	ENST00000578995	PRDM10	Q9NQV6	1147 aa		4.4	□□□□□ -1.71
SMARCE1-215	ENST00000578995	PDRG1	Q9NUG6	133 aa		4.4	□□□□□ -1.71
SMARCE1-215	ENST00000578995	HOXC10	Q9NYD6	342 aa		4.4	□□□□□ -1.71
SMARCE1-215	ENST00000578995	COL20A1	Q9P218	1284 aa		4.4	□□□□□ -1.71
SMARCE1-215	ENST00000578995	ZFAT	Q9P243	1243 aa		4.4	□□□□□ -1.71
SMARCE1-215	ENST00000578995	GABRQ	Q9UN88	632 aa		4.4	□□□□□ -1.71
SMARCE1-215	ENST00000578995	PPME1	Q9Y570	386 aa		4.4	□□□□□ -1.71
SMARCE1-215	ENST00000578995	PTPRS	Q13332	1948 aa		4.4	□□□□□ -1.71
SMARCE1-215	ENST00000578995	STK36	Q9NRP7	1315 aa		4.4	□□□□□ -1.71
SMARCE1-215	ENST00000578995	hCG_1642624	A0A1W2PR95	340 aa		4.39	□□□□□ -1.71
SMARCE1-215	ENST00000578995	ERICH2	A1L162	156 aa		4.39	□□□□□ -1.71
SMARCE1-215	ENST00000578995	CCDC69	A6NI79	296 aa		4.39	□□□□□ -1.71
SMARCE1-215	ENST00000578995	GOLGA8A	A7E2F4	631 aa		4.39	□□□□□ -1.71
SMARCE1-215	ENST00000578995		M0R2N6	131 aa		4.39	□□□□□ -1.71
SMARCE1-215	ENST00000578995	STXBP3	O00186	592 aa		4.39	□□□□□ -1.71
SMARCE1-215	ENST00000578995	NFIB	O00712	420 aa		4.39	□□□□□ -1.71
SMARCE1-215	ENST00000578995	ZBTB5	O15062	677 aa		4.39	□□□□□ -1.71
SMARCE1-215	ENST00000578995	EIF5B	O60841	1220 aa	Known RBP	4.39	□□□□□ -1.71
SMARCE1-215	ENST00000578995	FKTN	O75072	461 aa		4.39	□□□□□ -1.71
SMARCE1-215	ENST00000578995	GHRH	P01286	108 aa		4.39	□□□□□ -1.71
SMARCE1-215	ENST00000578995	F13B	P05160	661 aa		4.39	□□□□□ -1.71
SMARCE1-215	ENST00000578995	CALM1	P0DP23	149 aa		4.39	□□□□□ -1.71
SMARCE1-215	ENST00000578995	CALM2	P0DP24	149 aa		4.39	□□□□□ -1.71
SMARCE1-215	ENST00000578995	CALM3	P0DP25	149 aa		4.39	□□□□□ -1.71
SMARCE1-215	ENST00000578995	ERCC3	P19447	782 aa		4.39	□□□□□ -1.71
SMARCE1-215	ENST00000578995	STAT3	P40763	770 aa		4.39	□□□□□ -1.71
SMARCE1-215	ENST00000578995	RAP1GAP	P47736	663 aa		4.39	□□□□□ -1.71
SMARCE1-215	ENST00000578995	CTCF	P49711	727 aa	Predicted RBP	4.39	□□□□□ -1.71
SMARCE1-215	ENST00000578995	HSD17B4	P51659	736 aa		4.39	□□□□□ -1.71
SMARCE1-215	ENST00000578995	PRKCZ	Q05513	592 aa		4.39	□□□□□ -1.71
SMARCE1-215	ENST00000578995	IRF5	Q13568	498 aa		4.39	□□□□□ -1.71
SMARCE1-215	ENST00000578995	CUL4A	Q13619	759 aa		4.39	□□□□□ -1.71
SMARCE1-215	ENST00000578995	SART3	Q15020	963 aa	Known RBP	4.39	□□□□□ -1.71
SMARCE1-215	ENST00000578995	ZNF792	Q3KQV3	632 aa		4.39	□□□□□ -1.71
SMARCE1-215	ENST00000578995	WWC2	Q6AWC2	1192 aa		4.39	□□□□□ -1.71
SMARCE1-215	ENST00000578995	OTUD7B	Q6GQQ9	843 aa		4.39	□□□□□ -1.71
SMARCE1-215	ENST00000578995	SLC30A10	Q6XR72	485 aa		4.39	□□□□□ -1.71
SMARCE1-215	ENST00000578995	KRT25	Q7Z3Z0	450 aa		4.39	□□□□□ -1.71
SMARCE1-215	ENST00000578995	GPR142	Q7Z601	462 aa		4.39	□□□□□ -1.71
SMARCE1-215	ENST00000578995	CATIP	Q7Z7H3	387 aa		4.39	□□□□□ -1.71
SMARCE1-215	ENST00000578995	CILP2	Q8IUL8	1156 aa		4.39	□□□□□ -1.71
SMARCE1-215	ENST00000578995	CCDC144CP	Q8IYA2	1237 aa		4.39	□□□□□ -1.71
SMARCE1-215	ENST00000578995	ABRA	Q8N0Z2	381 aa		4.39	□□□□□ -1.71
SMARCE1-215	ENST00000578995	NECAB1	Q8N987	351 aa		4.39	□□□□□ -1.71
SMARCE1-215	ENST00000578995	FAM133A	Q8N9E0	248 aa		4.39	□□□□□ -1.71
SMARCE1-215	ENST00000578995	NSUN7	Q8NE18	718 aa	Known RBP	4.39	□□□□□ -1.71
SMARCE1-215	ENST00000578995	GPRC5A	Q8NFJ5	357 aa		4.39	□□□□□ -1.71
SMARCE1-215	ENST00000578995	NPLOC4	Q8TAT6	608 aa		4.39	□□□□□ -1.71
SMARCE1-215	ENST00000578995	MORC4	Q8TE76	937 aa		4.39	□□□□□ -1.71
SMARCE1-215	ENST00000578995	SMCR8	Q8TEV9	937 aa	Predicted RBP	4.39	□□□□□ -1.71
SMARCE1-215	ENST00000578995	CHURC1	Q8WUH1	139 aa		4.39	□□□□□ -1.71
SMARCE1-215	ENST00000578995	CRYGN	Q8WXF5	182 aa		4.39	□□□□□ -1.71
SMARCE1-215	ENST00000578995	FAM168A	Q92567	244 aa		4.39	□□□□□ -1.71
SMARCE1-215	ENST00000578995	TBC1D5	Q92609	795 aa		4.39	□□□□□ -1.71
SMARCE1-215	ENST00000578995	AIFM3	Q96NN9	605 aa		4.39	□□□□□ -1.71
SMARCE1-215	ENST00000578995	PAGR1	Q9BTK6	254 aa		4.39	□□□□□ -1.71
SMARCE1-215	ENST00000578995	RBSN	Q9H1K0	784 aa		4.39	□□□□□ -1.71
SMARCE1-215	ENST00000578995	A1CF	Q9NQ94	594 aa	Known RBP	4.39	□□□□□ -1.71
SMARCE1-215	ENST00000578995	FLRT1	Q9NZU1	646 aa		4.39	□□□□□ -1.71
SMARCE1-215	ENST00000578995	SRRD	Q9UH36	339 aa		4.39	□□□□□ -1.71
SMARCE1-215	ENST00000578995	MTMR7	Q9Y216	660 aa		4.39	□□□□□ -1.71
SMARCE1-215	ENST00000578995	SLC12A7	Q9Y666	1083 aa		4.39	□□□□□ -1.71
SMARCE1-215	ENST00000578995	MYH11	P35749	1972 aa		4.39	□□□□□ -1.71

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