RNA–Protein interactions for RNA: ENST00000578519.5

SKA2-204, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3

Gene SKA2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-204ENST00000578519 PADI6Q6TGC4 694 aa12.25□□□□□ -0.45
SKA2-204ENST00000578519 LRRC55Q6ZSA7 311 aa12.25□□□□□ -0.45
SKA2-204ENST00000578519 REXO1L1PQ8IX06 675 aa12.25□□□□□ -0.45
SKA2-204ENST00000578519 SYCP3Q8IZU3 236 aa12.25□□□□□ -0.45
SKA2-204ENST00000578519 EHBP1Q8NDI1 1231 aa12.25□□□□□ -0.45
SKA2-204ENST00000578519 CDCA5Q96FF9 252 aa12.25□□□□□ -0.45
SKA2-204ENST00000578519 INPP4AQ96PE3 977 aaPredicted RBP12.25□□□□□ -0.45
SKA2-204ENST00000578519 MKNK1Q9BUB5 465 aa12.25□□□□□ -0.45
SKA2-204ENST00000578519 RUSC1Q9BVN2 902 aa12.25□□□□□ -0.45
SKA2-204ENST00000578519 C17orf75Q9HAS0 396 aa12.25□□□□□ -0.45
SKA2-204ENST00000578519 PNMA3Q9UL41 463 aa12.25□□□□□ -0.45
SKA2-204ENST00000578519 FRMD4BQ9Y2L6 1034 aa12.25□□□□□ -0.45
SKA2-204ENST00000578519 LOC102724159A0A0B4J2E5 919 aa12.24□□□□□ -0.45
SKA2-204ENST00000578519 A0A0G2JLL6 359 aaPredicted RBP12.24□□□□□ -0.45
SKA2-204ENST00000578519 GLTPD2A6NH11 291 aa12.24□□□□□ -0.45
SKA2-204ENST00000578519 ADM5C9JUS6 153 aa12.24□□□□□ -0.45
SKA2-204ENST00000578519 POTEB2H3BUK9 544 aa12.24□□□□□ -0.45
SKA2-204ENST00000578519 PSMC2P35998 433 aaKnown RBP12.24□□□□□ -0.45
SKA2-204ENST00000578519 PWP2Q15269 919 aaKnown RBP12.24□□□□□ -0.45
SKA2-204ENST00000578519 SPA17Q15506 151 aa12.24□□□□□ -0.45
SKA2-204ENST00000578519 MIIPQ5JXC2 388 aa12.24□□□□□ -0.45
SKA2-204ENST00000578519 ZNF720Q7Z2F6 126 aa12.24□□□□□ -0.45
SKA2-204ENST00000578519 PRRT2Q7Z6L0 340 aaPredicted RBP12.24□□□□□ -0.45
SKA2-204ENST00000578519 BANK1Q8NDB2 785 aa12.24□□□□□ -0.45
SKA2-204ENST00000578519 VTI1AQ96AJ9 217 aa12.24□□□□□ -0.45
SKA2-204ENST00000578519 HVCN1Q96D96 273 aa12.24□□□□□ -0.45
SKA2-204ENST00000578519 ACCSQ96QU6 501 aa12.24□□□□□ -0.45
SKA2-204ENST00000578519 PKD2L1Q9P0L9 805 aa12.24□□□□□ -0.45
SKA2-204ENST00000578519 AGTPBP1Q9UPW5 1226 aa12.24□□□□□ -0.45
SKA2-204ENST00000578519 ADGRG1Q9Y653 693 aa12.24□□□□□ -0.45
SKA2-204ENST00000578519 EPN1Q9Y6I3 576 aaPredicted RBP12.24□□□□□ -0.45
SKA2-204ENST00000578519 USP27XA6NNY8 438 aa12.23□□□□□ -0.45
SKA2-204ENST00000578519 IRF6O14896 467 aa12.23□□□□□ -0.45
SKA2-204ENST00000578519 USO1O60763 962 aaKnown RBP12.23□□□□□ -0.45
SKA2-204ENST00000578519 PRPF6O94906 941 aaKnown RBP12.23□□□□□ -0.45
SKA2-204ENST00000578519 AFPP02771 609 aaKnown RBP12.23□□□□□ -0.45
SKA2-204ENST00000578519 NR3C1P04150 777 aa12.23□□□□□ -0.45
SKA2-204ENST00000578519 TGFB3P10600 412 aa12.23□□□□□ -0.45
SKA2-204ENST00000578519 XRCC5P13010 732 aaKnown RBP12.23□□□□□ -0.45
SKA2-204ENST00000578519 PLS3P13797 630 aa12.23□□□□□ -0.45
SKA2-204ENST00000578519 YWHABP31946 246 aaKnown RBP12.23□□□□□ -0.45
SKA2-204ENST00000578519 ICAM3P32942 547 aa12.23□□□□□ -0.45
SKA2-204ENST00000578519 GOLGA8FQ08AF8 430 aa12.23□□□□□ -0.45
SKA2-204ENST00000578519 GOLGA8DPQ0D2H9 430 aa12.23□□□□□ -0.45
SKA2-204ENST00000578519 CETN1Q12798 172 aa12.23□□□□□ -0.45
SKA2-204ENST00000578519 ITGB3BPQ13352 177 aaPredicted RBP12.23□□□□□ -0.45
SKA2-204ENST00000578519 DGKZQ13574 1117 aa12.23□□□□□ -0.45
SKA2-204ENST00000578519 MEA1Q16626 185 aa12.23□□□□□ -0.45
SKA2-204ENST00000578519 XKR9Q5GH70 373 aa12.23□□□□□ -0.45
SKA2-204ENST00000578519 TRIM59Q8IWR1 403 aa12.23□□□□□ -0.45
SKA2-204ENST00000578519 EXOC8Q8IYI6 725 aa12.23□□□□□ -0.45
SKA2-204ENST00000578519 MCPH1Q8NEM0 835 aa12.23□□□□□ -0.45
SKA2-204ENST00000578519 IL31RAQ8NI17 732 aa12.23□□□□□ -0.45
SKA2-204ENST00000578519 SYN2Q92777 582 aaPredicted RBP12.23□□□□□ -0.45
SKA2-204ENST00000578519 KIFAP3Q92845 792 aa12.23□□□□□ -0.45
SKA2-204ENST00000578519 SLC10A4Q96EP9 437 aa12.23□□□□□ -0.45
SKA2-204ENST00000578519 CCDC42Q96M95 316 aa12.23□□□□□ -0.45
SKA2-204ENST00000578519 MAP7D2Q96T17 732 aa12.23□□□□□ -0.45
SKA2-204ENST00000578519 TSGA10Q9BZW7 698 aa12.23□□□□□ -0.45
SKA2-204ENST00000578519 GBP3Q9H0R5 595 aa12.23□□□□□ -0.45
SKA2-204ENST00000578519 HAUS4Q9H6D7 363 aa12.23□□□□□ -0.45
SKA2-204ENST00000578519 ELP3Q9H9T3 547 aa12.23□□□□□ -0.45
SKA2-204ENST00000578519 A1CFQ9NQ94 594 aaKnown RBP12.23□□□□□ -0.45
SKA2-204ENST00000578519 CEP72Q9P209 647 aa12.23□□□□□ -0.45
SKA2-204ENST00000578519 SLC9A2Q9UBY0 812 aa12.23□□□□□ -0.45
SKA2-204ENST00000578519 KCNH4Q9UQ05 1017 aa12.23□□□□□ -0.45
SKA2-204ENST00000578519 RIPK3Q9Y572 518 aa12.23□□□□□ -0.45
SKA2-204ENST00000578519 SOWAHDA6NJG2 315 aa12.22□□□□□ -0.45
SKA2-204ENST00000578519 SPATA31C2B4DYI2 1134 aa12.22□□□□□ -0.45
SKA2-204ENST00000578519 RIOK3O14730 519 aaKnown RBP12.22□□□□□ -0.45
SKA2-204ENST00000578519 KRT86O43790 486 aa12.22□□□□□ -0.45
SKA2-204ENST00000578519 HIP1RO75146 1068 aa12.22□□□□□ -0.45
SKA2-204ENST00000578519 NDUFA10O95299 355 aa12.22□□□□□ -0.45
SKA2-204ENST00000578519 MYBP10242 640 aa12.22□□□□□ -0.45
SKA2-204ENST00000578519 KRT13P13646 458 aa12.22□□□□□ -0.45
SKA2-204ENST00000578519 HNRNPH3P31942 346 aaKnown RBP12.22□□□□□ -0.45
SKA2-204ENST00000578519 RARRES1P49788 294 aa12.22□□□□□ -0.45
SKA2-204ENST00000578519 CLCN6P51797 869 aa12.22□□□□□ -0.45
SKA2-204ENST00000578519 GNG11P61952 73 aa12.22□□□□□ -0.45
SKA2-204ENST00000578519 SNAPC2Q13487 334 aa12.22□□□□□ -0.45
SKA2-204ENST00000578519 NEDD9Q14511 834 aa12.22□□□□□ -0.45
SKA2-204ENST00000578519 PTPN21Q16825 1174 aa12.22□□□□□ -0.45
SKA2-204ENST00000578519 SYT10Q6XYQ8 523 aa12.22□□□□□ -0.45
SKA2-204ENST00000578519 ZNF662Q6ZS27 426 aa12.22□□□□□ -0.45
SKA2-204ENST00000578519 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.22□□□□□ -0.45
SKA2-204ENST00000578519 USP37Q86T82 979 aa12.22□□□□□ -0.45
SKA2-204ENST00000578519 NCAPG2Q86XI2 1143 aa12.22□□□□□ -0.45
SKA2-204ENST00000578519 SLC9A9Q8IVB4 645 aa12.22□□□□□ -0.45
SKA2-204ENST00000578519 SPATC1LQ9H0A9 340 aa12.22□□□□□ -0.45
SKA2-204ENST00000578519 DEF6Q9H4E7 631 aa12.22□□□□□ -0.45
SKA2-204ENST00000578519 ST6GALNAC4Q9H4F1 302 aa12.22□□□□□ -0.45
SKA2-204ENST00000578519 MROH8Q9H579 483 aa12.22□□□□□ -0.45
SKA2-204ENST00000578519 JPH1Q9HDC5 661 aaPredicted RBP12.22□□□□□ -0.45
SKA2-204ENST00000578519 DNAI1Q9UI46 699 aa12.22□□□□□ -0.45
SKA2-204ENST00000578519 MYO6Q9UM54 1294 aa12.22□□□□□ -0.45
SKA2-204ENST00000578519 PPME1Q9Y570 386 aa12.22□□□□□ -0.45
SKA2-204ENST00000578519 SSC5DA1L4H1 1573 aa12.22□□□□□ -0.45
SKA2-204ENST00000578519 PHIPQ8WWQ0 1821 aa12.21□□□□□ -0.45
SKA2-204ENST00000578519 GTPBP10A4D1E9 387 aaKnown RBP12.21□□□□□ -0.45
SKA2-204ENST00000578519 EIF3CLB5ME19 914 aaKnown RBP12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms