RNA–Protein interactions for RNA: ENST00000578469.1

SREBF1-218, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 588 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-218ENST00000578469 CCDC43Q96MW1 224 aaKnown RBP18.76■□□□□ 0.59
SREBF1-218ENST00000578469 DUSP9Q99956 384 aaKnown RBP18.76■□□□□ 0.59
SREBF1-218ENST00000578469 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.76■□□□□ 0.59
SREBF1-218ENST00000578469 DBR1Q9UK59 544 aaKnown RBP18.76■□□□□ 0.59
SREBF1-218ENST00000578469 MGAMO43451 1857 aa18.75■□□□□ 0.59
SREBF1-218ENST00000578469 A0A1W2PPC1 479 aa18.75■□□□□ 0.59
SREBF1-218ENST00000578469 N4BP3O15049 544 aa18.75■□□□□ 0.59
SREBF1-218ENST00000578469 ADCY3O60266 1144 aa18.75■□□□□ 0.59
SREBF1-218ENST00000578469 PEX10O60683 326 aa18.75■□□□□ 0.59
SREBF1-218ENST00000578469 KCNA2P16389 499 aa18.75■□□□□ 0.59
SREBF1-218ENST00000578469 COPB1P53618 953 aaKnown RBP18.75■□□□□ 0.59
SREBF1-218ENST00000578469 CNTN2Q02246 1040 aa18.75■□□□□ 0.59
SREBF1-218ENST00000578469 CACNB1Q02641 598 aaPredicted RBP18.75■□□□□ 0.59
SREBF1-218ENST00000578469 C1orf186Q6ZWK4 172 aa18.75■□□□□ 0.59
SREBF1-218ENST00000578469 APTXQ7Z2E3 356 aaKnown RBP18.75■□□□□ 0.59
SREBF1-218ENST00000578469 LRRC8AQ8IWT6 810 aa18.75■□□□□ 0.59
SREBF1-218ENST00000578469 FAM133AQ8N9E0 248 aa18.75■□□□□ 0.59
SREBF1-218ENST00000578469 SMCR8Q8TEV9 937 aaPredicted RBP18.75■□□□□ 0.59
SREBF1-218ENST00000578469 MMP19Q99542 508 aa18.75■□□□□ 0.59
SREBF1-218ENST00000578469 RUSC1Q9BVN2 902 aa18.75■□□□□ 0.59
SREBF1-218ENST00000578469 KCNF1Q9H3M0 494 aa18.75■□□□□ 0.59
SREBF1-218ENST00000578469 SEMA6BQ9H3T3 888 aa18.75■□□□□ 0.59
SREBF1-218ENST00000578469 TXNRD2Q9NNW7 524 aa18.75■□□□□ 0.59
SREBF1-218ENST00000578469 RTN4Q9NQC3 1192 aaKnown RBP18.75■□□□□ 0.59
SREBF1-218ENST00000578469 PCDHA10Q9Y5I2 948 aa18.75■□□□□ 0.59
SREBF1-218ENST00000578469 TNPO2O14787 897 aaKnown RBP18.74■□□□□ 0.59
SREBF1-218ENST00000578469 ZNF500O60304 480 aaPredicted RBP18.74■□□□□ 0.59
SREBF1-218ENST00000578469 EVI5O60447 810 aa18.74■□□□□ 0.59
SREBF1-218ENST00000578469 PSAPP07602 524 aa18.74■□□□□ 0.59
SREBF1-218ENST00000578469 GCLCP48506 637 aaPredicted RBP18.74■□□□□ 0.59
SREBF1-218ENST00000578469 ERVK-9P63128 1117 aa18.74■□□□□ 0.59
SREBF1-218ENST00000578469 ERVK-24P63145 666 aa18.74■□□□□ 0.59
SREBF1-218ENST00000578469 LRRC41Q15345 812 aa18.74■□□□□ 0.59
SREBF1-218ENST00000578469 SPECC1LQ69YQ0 1117 aa18.74■□□□□ 0.59
SREBF1-218ENST00000578469 C4orf19Q8IY42 314 aa18.74■□□□□ 0.59
SREBF1-218ENST00000578469 GPRC5AQ8NFJ5 357 aa18.74■□□□□ 0.59
SREBF1-218ENST00000578469 CACTINQ8WUQ7 758 aaKnown RBP18.74■□□□□ 0.59
SREBF1-218ENST00000578469 UNC93B1Q9H1C4 597 aa18.74■□□□□ 0.59
SREBF1-218ENST00000578469 JPH1Q9HDC5 661 aaPredicted RBP18.74■□□□□ 0.59
SREBF1-218ENST00000578469 RRAGDQ9NQL2 400 aaPredicted RBP18.74■□□□□ 0.59
SREBF1-218ENST00000578469 INTS13Q9NVM9 706 aa18.74■□□□□ 0.59
SREBF1-218ENST00000578469 TBC1D7Q9P0N9 293 aa18.74■□□□□ 0.59
SREBF1-218ENST00000578469 SEL1LQ9UBV2 794 aa18.74■□□□□ 0.59
SREBF1-218ENST00000578469 ODF2LQ9ULJ1 636 aa18.74■□□□□ 0.59
SREBF1-218ENST00000578469 PCDHA2Q9Y5H9 948 aa18.74■□□□□ 0.59
SREBF1-218ENST00000578469 SOWAHBA6NEL2 793 aa18.73■□□□□ 0.59
SREBF1-218ENST00000578469 SGPL1O95470 568 aa18.73■□□□□ 0.59
SREBF1-218ENST00000578469 CCNE2O96020 404 aa18.73■□□□□ 0.59
SREBF1-218ENST00000578469 SFPQP23246 707 aaKnown RBP eCLIP18.73■□□□□ 0.59
SREBF1-218ENST00000578469 EDNRBP24530 442 aa18.73■□□□□ 0.59
SREBF1-218ENST00000578469 GUCY2CP25092 1073 aa18.73■□□□□ 0.59
SREBF1-218ENST00000578469 Q3C1V9 767 aa18.73■□□□□ 0.59
SREBF1-218ENST00000578469 WDR78Q5VTH9 848 aa18.73■□□□□ 0.59
SREBF1-218ENST00000578469 MIS18BP1Q6P0N0 1132 aa18.73■□□□□ 0.59
SREBF1-218ENST00000578469 STXBP4Q6ZWJ1 553 aa18.73■□□□□ 0.59
SREBF1-218ENST00000578469 SFR1Q86XK3 245 aa18.73■□□□□ 0.59
SREBF1-218ENST00000578469 ATP6V0A1Q93050 837 aa18.73■□□□□ 0.59
SREBF1-218ENST00000578469 TIPINQ9BVW5 301 aa18.73■□□□□ 0.59
SREBF1-218ENST00000578469 ANKEF1Q9NU02 776 aa18.73■□□□□ 0.59
SREBF1-218ENST00000578469 TAB2Q9NYJ8 693 aa18.73■□□□□ 0.59
SREBF1-218ENST00000578469 WRAP73Q9P2S5 460 aaPredicted RBP18.73■□□□□ 0.59
SREBF1-218ENST00000578469 SLC9A2Q9UBY0 812 aa18.73■□□□□ 0.59
SREBF1-218ENST00000578469 LOXHD1Q8IVV2 1947 aa18.72■□□□□ 0.59
SREBF1-218ENST00000578469 LOC102724159A0A0B4J2E5 919 aa18.72■□□□□ 0.59
SREBF1-218ENST00000578469 RGS20O76081 388 aa18.72■□□□□ 0.59
SREBF1-218ENST00000578469 INHAP05111 366 aa18.72■□□□□ 0.59
SREBF1-218ENST00000578469 FLT3LGP49771 235 aa18.72■□□□□ 0.59
SREBF1-218ENST00000578469 PWP2Q15269 919 aaKnown RBP18.72■□□□□ 0.59
SREBF1-218ENST00000578469 PADI6Q6TGC4 694 aa18.72■□□□□ 0.59
SREBF1-218ENST00000578469 PPP4R3CPQ6ZMV5 832 aa18.72■□□□□ 0.59
SREBF1-218ENST00000578469 OTUD6AQ7L8S5 288 aa18.72■□□□□ 0.59
SREBF1-218ENST00000578469 IRF2BP1Q8IU81 584 aa18.72■□□□□ 0.59
SREBF1-218ENST00000578469 MYCT1Q8N699 235 aa18.72■□□□□ 0.59
SREBF1-218ENST00000578469 PXYLP1Q8TE99 480 aa18.72■□□□□ 0.59
SREBF1-218ENST00000578469 VPS16Q9H269 839 aa18.72■□□□□ 0.59
SREBF1-218ENST00000578469 MRPL44Q9H9J2 332 aaKnown RBP18.72■□□□□ 0.59
SREBF1-218ENST00000578469 PARVGQ9HBI0 331 aa18.72■□□□□ 0.59
SREBF1-218ENST00000578469 OLFML3Q9NRN5 406 aa18.72■□□□□ 0.59
SREBF1-218ENST00000578469 GABRQQ9UN88 632 aa18.72■□□□□ 0.59
SREBF1-218ENST00000578469 ZBTB39O15060 712 aa18.71■□□□□ 0.59
SREBF1-218ENST00000578469 TFRCP02786 760 aaKnown RBP18.71■□□□□ 0.59
SREBF1-218ENST00000578469 YWHABP31946 246 aaKnown RBP18.71■□□□□ 0.59
SREBF1-218ENST00000578469 CLCN1P35523 988 aa18.71■□□□□ 0.59
SREBF1-218ENST00000578469 MTIF2P46199 727 aaKnown RBP18.71■□□□□ 0.59
SREBF1-218ENST00000578469 FKBP3Q00688 224 aaKnown RBP18.71■□□□□ 0.59
SREBF1-218ENST00000578469 IRF5Q13568 498 aa18.71■□□□□ 0.59
SREBF1-218ENST00000578469 KCNV1Q6PIU1 500 aa18.71■□□□□ 0.59
SREBF1-218ENST00000578469 SEPT14Q6ZU15 432 aa18.71■□□□□ 0.59
SREBF1-218ENST00000578469 PPFIBP1Q86W92 1011 aa18.71■□□□□ 0.59
SREBF1-218ENST00000578469 SCFD1Q8WVM8 642 aa18.71■□□□□ 0.59
SREBF1-218ENST00000578469 CNOT6LQ96LI5 555 aaKnown RBP18.71■□□□□ 0.59
SREBF1-218ENST00000578469 PRO3102Q9H379 93 aa18.71■□□□□ 0.59
SREBF1-218ENST00000578469 ITIH6Q6UXX5 1313 aa18.71■□□□□ 0.59
SREBF1-218ENST00000578469 DNAJC25-GNG10A0A024R161 153 aa18.7■□□□□ 0.58
SREBF1-218ENST00000578469 RSPH10B2B2RC85 870 aa18.7■□□□□ 0.58
SREBF1-218ENST00000578469 TEX33O43247 280 aa18.7■□□□□ 0.58
SREBF1-218ENST00000578469 GNA14O95837 355 aa18.7■□□□□ 0.58
SREBF1-218ENST00000578469 TPM1P09493 284 aa18.7■□□□□ 0.58
SREBF1-218ENST00000578469 RSPH10BP0C881 870 aa18.7■□□□□ 0.58
SREBF1-218ENST00000578469 TGFB3P10600 412 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms