RNA–Protein interactions for RNA: ENST00000577725.1

CRLF3-202, Transcript of cytokine receptor like factor 3, humanhuman

TSL 5

Gene CRLF3, Length 613 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-202ENST00000577725 ADORA2AP29274 412 aa11.26□□□□□ -0.61
CRLF3-202ENST00000577725 RABGGTBP53611 331 aa11.26□□□□□ -0.61
CRLF3-202ENST00000577725 PDE4DQ08499 809 aa11.26□□□□□ -0.61
CRLF3-202ENST00000577725 GRB14Q14449 540 aa11.26□□□□□ -0.61
CRLF3-202ENST00000577725 PDIA5Q14554 519 aa11.26□□□□□ -0.61
CRLF3-202ENST00000577725 MCM6Q14566 821 aa11.26□□□□□ -0.61
CRLF3-202ENST00000577725 POSTNQ15063 836 aa11.26□□□□□ -0.61
CRLF3-202ENST00000577725 TMEM119Q4V9L6 283 aa11.26□□□□□ -0.61
CRLF3-202ENST00000577725 KRT79Q5XKE5 535 aa11.26□□□□□ -0.61
CRLF3-202ENST00000577725 XRRA1Q6P2D8 792 aa11.26□□□□□ -0.61
CRLF3-202ENST00000577725 SEPT14Q6ZU15 432 aa11.26□□□□□ -0.61
CRLF3-202ENST00000577725 RNF180Q86T96 592 aa11.26□□□□□ -0.61
CRLF3-202ENST00000577725 NLRX1Q86UT6 975 aa11.26□□□□□ -0.61
CRLF3-202ENST00000577725 IQUBQ8NA54 791 aa11.26□□□□□ -0.61
CRLF3-202ENST00000577725 DNERQ8NFT8 737 aa11.26□□□□□ -0.61
CRLF3-202ENST00000577725 CALML4Q96GE6 196 aa11.26□□□□□ -0.61
CRLF3-202ENST00000577725 DYDC2Q96IM9 177 aa11.26□□□□□ -0.61
CRLF3-202ENST00000577725 CDK5RAP3Q96JB5 506 aa11.26□□□□□ -0.61
CRLF3-202ENST00000577725 MTRQ99707 1265 aa11.26□□□□□ -0.61
CRLF3-202ENST00000577725 BLZF1Q9H2G9 400 aa11.26□□□□□ -0.61
CRLF3-202ENST00000577725 TELO2Q9Y4R8 837 aa11.26□□□□□ -0.61
CRLF3-202ENST00000577725 DHX15O43143 795 aaKnown RBP11.25□□□□□ -0.61
CRLF3-202ENST00000577725 FGBP02675 491 aa11.25□□□□□ -0.61
CRLF3-202ENST00000577725 MYOGP15173 224 aa11.25□□□□□ -0.61
CRLF3-202ENST00000577725 SP4Q02446 784 aa11.25□□□□□ -0.61
CRLF3-202ENST00000577725 CYP4A11Q02928 519 aa11.25□□□□□ -0.61
CRLF3-202ENST00000577725 CTTNQ14247 550 aaKnown RBP11.25□□□□□ -0.61
CRLF3-202ENST00000577725 STXBP2Q15833 593 aa11.25□□□□□ -0.61
CRLF3-202ENST00000577725 OLFML2BQ68BL8 750 aa11.25□□□□□ -0.61
CRLF3-202ENST00000577725 POTEGQ6S5H5 508 aa11.25□□□□□ -0.61
CRLF3-202ENST00000577725 SASS6Q6UVJ0 657 aa11.25□□□□□ -0.61
CRLF3-202ENST00000577725 MIER3Q7Z3K6 550 aa11.25□□□□□ -0.61
CRLF3-202ENST00000577725 GPRASP2Q96D09 838 aa11.25□□□□□ -0.61
CRLF3-202ENST00000577725 INPP4AQ96PE3 977 aaPredicted RBP11.25□□□□□ -0.61
CRLF3-202ENST00000577725 IWS1Q96ST2 819 aa11.25□□□□□ -0.61
CRLF3-202ENST00000577725 EIF2AK1Q9BQI3 630 aaKnown RBP11.25□□□□□ -0.61
CRLF3-202ENST00000577725 MAF1Q9H063 256 aa11.25□□□□□ -0.61
CRLF3-202ENST00000577725 RBSNQ9H1K0 784 aa11.25□□□□□ -0.61
CRLF3-202ENST00000577725 IL23AQ9NPF7 189 aa11.25□□□□□ -0.61
CRLF3-202ENST00000577725 XPNPEP3Q9NQH7 507 aa11.25□□□□□ -0.61
CRLF3-202ENST00000577725 BLOC1S4Q9NUP1 217 aa11.25□□□□□ -0.61
CRLF3-202ENST00000577725 RGL1Q9NZL6 768 aa11.25□□□□□ -0.61
CRLF3-202ENST00000577725 KIAA1468Q9P260 1216 aa11.25□□□□□ -0.61
CRLF3-202ENST00000577725 ADD3Q9UEY8 706 aaKnown RBP11.25□□□□□ -0.61
CRLF3-202ENST00000577725 USP25Q9UHP3 1055 aa11.25□□□□□ -0.61
CRLF3-202ENST00000577725 KIAA1024Q9UPX6 916 aa11.25□□□□□ -0.61
CRLF3-202ENST00000577725 TRANK1O15050 2925 aa11.24□□□□□ -0.61
CRLF3-202ENST00000577725 E9PMD0 336 aa11.24□□□□□ -0.61
CRLF3-202ENST00000577725 SSBP05455 408 aaKnown RBP eCLIP11.24□□□□□ -0.61
CRLF3-202ENST00000577725 CCDC192P0DO97 292 aa11.24□□□□□ -0.61
CRLF3-202ENST00000577725 KCNA2P16389 499 aa11.24□□□□□ -0.61
CRLF3-202ENST00000577725 EDNRBP24530 442 aa11.24□□□□□ -0.61
CRLF3-202ENST00000577725 PPP2R5CQ13362 524 aa11.24□□□□□ -0.61
CRLF3-202ENST00000577725 CUL4BQ13620 913 aa11.24□□□□□ -0.61
CRLF3-202ENST00000577725 ZNF792Q3KQV3 632 aa11.24□□□□□ -0.61
CRLF3-202ENST00000577725 ANO6Q4KMQ2 910 aa11.24□□□□□ -0.61
CRLF3-202ENST00000577725 C11orf57Q6ZUT1 292 aaPredicted RBP11.24□□□□□ -0.61
CRLF3-202ENST00000577725 FBXO16Q8IX29 292 aaPredicted RBP11.24□□□□□ -0.61
CRLF3-202ENST00000577725 RNF214Q8ND24 703 aa11.24□□□□□ -0.61
CRLF3-202ENST00000577725 ERMNQ8TAM6 284 aa11.24□□□□□ -0.61
CRLF3-202ENST00000577725 RAD54LQ92698 747 aa11.24□□□□□ -0.61
CRLF3-202ENST00000577725 RNF25Q96BH1 459 aaPredicted RBP11.24□□□□□ -0.61
CRLF3-202ENST00000577725 RIT2Q99578 217 aa11.24□□□□□ -0.61
CRLF3-202ENST00000577725 STARD7Q9NQZ5 370 aa11.24□□□□□ -0.61
CRLF3-202ENST00000577725 MAN1B1Q9UKM7 699 aa11.24□□□□□ -0.61
CRLF3-202ENST00000577725 PCDHA5Q9Y5H7 936 aa11.24□□□□□ -0.61
CRLF3-202ENST00000577725 MROH7Q68CQ1 1323 aa11.24□□□□□ -0.61
CRLF3-202ENST00000577725 FSD2A1L4K1 749 aa11.23□□□□□ -0.61
CRLF3-202ENST00000577725 GOLGA6L3A6NEY3 463 aa11.23□□□□□ -0.61
CRLF3-202ENST00000577725 SPATA31C2B4DYI2 1134 aa11.23□□□□□ -0.61
CRLF3-202ENST00000577725 EIF3JO75822 258 aaKnown RBP11.23□□□□□ -0.61
CRLF3-202ENST00000577725 CCNE2O96020 404 aa11.23□□□□□ -0.61
CRLF3-202ENST00000577725 SPATA31C1P0DKV0 1188 aa11.23□□□□□ -0.61
CRLF3-202ENST00000577725 RARBP10826 455 aa11.23□□□□□ -0.61
CRLF3-202ENST00000577725 PTGS1P23219 599 aa11.23□□□□□ -0.61
CRLF3-202ENST00000577725 ID4P47928 161 aa11.23□□□□□ -0.61
CRLF3-202ENST00000577725 PSMC6P62333 389 aa11.23□□□□□ -0.61
CRLF3-202ENST00000577725 SP2Q02086 613 aa11.23□□□□□ -0.61
CRLF3-202ENST00000577725 TCF15Q12870 199 aa11.23□□□□□ -0.61
CRLF3-202ENST00000577725 DPYDQ12882 1025 aa11.23□□□□□ -0.61
CRLF3-202ENST00000577725 EPHA7Q15375 998 aa11.23□□□□□ -0.61
CRLF3-202ENST00000577725 STX1AQ16623 288 aa11.23□□□□□ -0.61
CRLF3-202ENST00000577725 LEXMQ3ZCV2 418 aa11.23□□□□□ -0.61
CRLF3-202ENST00000577725 HYIQ5T013 277 aa11.23□□□□□ -0.61
CRLF3-202ENST00000577725 KANK3Q6NY19 840 aa11.23□□□□□ -0.61
CRLF3-202ENST00000577725 B3GNT9Q6UX72 402 aa11.23□□□□□ -0.61
CRLF3-202ENST00000577725 OTOP2Q7RTS6 562 aa11.23□□□□□ -0.61
CRLF3-202ENST00000577725 DPP9Q86TI2 863 aa11.23□□□□□ -0.61
CRLF3-202ENST00000577725 CATSPER3Q86XQ3 398 aa11.23□□□□□ -0.61
CRLF3-202ENST00000577725 BANK1Q8NDB2 785 aa11.23□□□□□ -0.61
CRLF3-202ENST00000577725 SMARCE1Q969G3 411 aa11.23□□□□□ -0.61
CRLF3-202ENST00000577725 PYM1Q9BRP8 204 aaKnown RBP11.23□□□□□ -0.61
CRLF3-202ENST00000577725 DNAJC25Q9H1X3 360 aa11.23□□□□□ -0.61
CRLF3-202ENST00000577725 CERS4Q9HA82 394 aa11.23□□□□□ -0.61
CRLF3-202ENST00000577725 HOOK1Q9UJC3 728 aaKnown RBP11.23□□□□□ -0.61
CRLF3-202ENST00000577725 TUBE1Q9UJT0 475 aa11.23□□□□□ -0.61
CRLF3-202ENST00000577725 SLC4A7Q9Y6M7 1214 aa11.23□□□□□ -0.61
CRLF3-202ENST00000577725 KDM3AQ9Y4C1 1321 aa11.23□□□□□ -0.61
CRLF3-202ENST00000577725 NPHP3-ACAD11A0A0J9YXS1 232 aa11.22□□□□□ -0.61
CRLF3-202ENST00000577725 EPOPA6NHQ4 379 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms